RNA–Protein interactions for RNA: ENST00000520463.1

PCNX2-222, Transcript of pecanex 2, human

TSL 2

Gene PCNX2, Length 766 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCNX2-222	ENST00000520463	GCC2	Q8IWJ2	1684 aa		11.55	□□□□□ -0.56
PCNX2-222	ENST00000520463	PSD	A5PKW4	1024 aa	Predicted RBP	11.54	□□□□□ -0.56
PCNX2-222	ENST00000520463	IFFO2	Q5TF58	517 aa		11.54	□□□□□ -0.56
PCNX2-222	ENST00000520463	UNC13B	O14795	1591 aa		11.54	□□□□□ -0.56
PCNX2-222	ENST00000520463	ADGRL3	Q9HAR2	1447 aa		11.53	□□□□□ -0.56
PCNX2-222	ENST00000520463	C1orf167	Q5SNV9	1468 aa		11.53	□□□□□ -0.56
PCNX2-222	ENST00000520463	XRN1	Q8IZH2	1706 aa	Known RBP	11.53	□□□□□ -0.56
PCNX2-222	ENST00000520463	FOXD4L1	Q9NU39	408 aa		11.53	□□□□□ -0.56
PCNX2-222	ENST00000520463	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.53	□□□□□ -0.56
PCNX2-222	ENST00000520463	SPHKAP	Q2M3C7	1700 aa		11.52	□□□□□ -0.56
PCNX2-222	ENST00000520463	MYOM2	P54296	1465 aa		11.52	□□□□□ -0.56
PCNX2-222	ENST00000520463	CHGA	P10645	457 aa	Known RBP	11.52	□□□□□ -0.57
PCNX2-222	ENST00000520463	POLA2	Q14181	598 aa		11.51	□□□□□ -0.57
PCNX2-222	ENST00000520463	ORAI2	Q96SN7	254 aa		11.51	□□□□□ -0.57
PCNX2-222	ENST00000520463	BRWD3	Q6RI45	1802 aa		11.51	□□□□□ -0.57
PCNX2-222	ENST00000520463	GLI3	P10071	1580 aa		11.5	□□□□□ -0.57
PCNX2-222	ENST00000520463	CROCC2	H7BZ55	1655 aa		11.5	□□□□□ -0.57
PCNX2-222	ENST00000520463	ONECUT3	O60422	494 aa	Predicted RBP	11.5	□□□□□ -0.57
PCNX2-222	ENST00000520463	BAG6	P46379	1132 aa		11.5	□□□□□ -0.57
PCNX2-222	ENST00000520463	UNC5CL	Q8IV45	518 aa		11.5	□□□□□ -0.57
PCNX2-222	ENST00000520463	ANKRD30A	Q9BXX3	1397 aa		11.5	□□□□□ -0.57
PCNX2-222	ENST00000520463	RALGAPB	Q86X10	1494 aa		11.5	□□□□□ -0.57
PCNX2-222	ENST00000520463	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.49	□□□□□ -0.57
PCNX2-222	ENST00000520463	MARF1	Q9Y4F3	1742 aa	Known RBP	11.49	□□□□□ -0.57
PCNX2-222	ENST00000520463	POTEH	Q6S545	545 aa		11.49	□□□□□ -0.57
PCNX2-222	ENST00000520463	SEPT12	Q8IYM1	358 aa		11.49	□□□□□ -0.57
PCNX2-222	ENST00000520463	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.49	□□□□□ -0.57
PCNX2-222	ENST00000520463	DAPK1	P53355	1430 aa		11.48	□□□□□ -0.57
PCNX2-222	ENST00000520463	SLIT2	O94813	1529 aa		11.48	□□□□□ -0.57
PCNX2-222	ENST00000520463	MET	P08581	1390 aa		11.47	□□□□□ -0.57
PCNX2-222	ENST00000520463	NALCN	Q8IZF0	1738 aa		11.46	□□□□□ -0.57
PCNX2-222	ENST00000520463	NRXN3	Q9Y4C0	1643 aa		11.46	□□□□□ -0.57
PCNX2-222	ENST00000520463	KANK4	Q5T7N3	995 aa	Predicted RBP	11.46	□□□□□ -0.57
PCNX2-222	ENST00000520463	KRT27	Q7Z3Y8	459 aa		11.46	□□□□□ -0.57
PCNX2-222	ENST00000520463	R3HDM1	Q15032	1099 aa	Known RBP	11.45	□□□□□ -0.58
PCNX2-222	ENST00000520463	CHIC2	Q9UKJ5	165 aa		11.45	□□□□□ -0.58
PCNX2-222	ENST00000520463	PTPN23	Q9H3S7	1636 aa		11.45	□□□□□ -0.58
PCNX2-222	ENST00000520463	NPHP3	Q7Z494	1330 aa		11.44	□□□□□ -0.58
PCNX2-222	ENST00000520463	ZBTB22	O15209	634 aa		11.44	□□□□□ -0.58
PCNX2-222	ENST00000520463	EN1	Q05925	392 aa	Predicted RBP	11.43	□□□□□ -0.58
PCNX2-222	ENST00000520463	VPS72	Q15906	364 aa		11.43	□□□□□ -0.58
PCNX2-222	ENST00000520463	PXDN	Q92626	1479 aa		11.41	□□□□□ -0.58
PCNX2-222	ENST00000520463	ANKRD50	Q9ULJ7	1429 aa		11.41	□□□□□ -0.58
PCNX2-222	ENST00000520463	ADGRL2	O95490	1459 aa		11.4	□□□□□ -0.58
PCNX2-222	ENST00000520463	DISP2	A7MBM2	1401 aa		11.4	□□□□□ -0.58
PCNX2-222	ENST00000520463	FOXO3	O43524	673 aa		11.39	□□□□□ -0.59
PCNX2-222	ENST00000520463	ESCO1	Q5FWF5	840 aa		11.39	□□□□□ -0.59
PCNX2-222	ENST00000520463		E9PCH4	1651 aa		11.39	□□□□□ -0.59
PCNX2-222	ENST00000520463	IQGAP3	Q86VI3	1631 aa		11.38	□□□□□ -0.59
PCNX2-222	ENST00000520463	UTRN	P46939	3433 aa		11.38	□□□□□ -0.59
PCNX2-222	ENST00000520463	LRPPRC	P42704	1394 aa	Known RBP	11.38	□□□□□ -0.59
PCNX2-222	ENST00000520463	SENP3-EIF4A1	A0A087X0R7	540 aa		11.37	□□□□□ -0.59
PCNX2-222	ENST00000520463	ROBO2	Q9HCK4	1378 aa		11.37	□□□□□ -0.59
PCNX2-222	ENST00000520463	SPATA31A3	Q5VYP0	1347 aa		11.36	□□□□□ -0.59
PCNX2-222	ENST00000520463	PRAG1	Q86YV5	1406 aa		11.36	□□□□□ -0.59
PCNX2-222	ENST00000520463	RGPD1	P0DJD0	1748 aa		11.36	□□□□□ -0.59
PCNX2-222	ENST00000520463	XPC	Q01831	940 aa	Predicted RBP	11.36	□□□□□ -0.59
PCNX2-222	ENST00000520463	EZH2	Q15910	746 aa	Known RBP	11.36	□□□□□ -0.59
PCNX2-222	ENST00000520463	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.36	□□□□□ -0.59
PCNX2-222	ENST00000520463	CAMKK2	Q96RR4	588 aa		11.36	□□□□□ -0.59
PCNX2-222	ENST00000520463	VPS8	Q8N3P4	1428 aa		11.35	□□□□□ -0.59
PCNX2-222	ENST00000520463	CCDC9	Q9Y3X0	531 aa	Known RBP	11.35	□□□□□ -0.59
PCNX2-222	ENST00000520463	NWD2	Q9ULI1	1742 aa		11.35	□□□□□ -0.59
PCNX2-222	ENST00000520463	USP32	Q8NFA0	1604 aa		11.35	□□□□□ -0.59
PCNX2-222	ENST00000520463	HFM1	A2PYH4	1435 aa		11.35	□□□□□ -0.59
PCNX2-222	ENST00000520463	NINL	Q9Y2I6	1382 aa		11.34	□□□□□ -0.59
PCNX2-222	ENST00000520463	ZNF326	Q5BKZ1	582 aa	Known RBP	11.34	□□□□□ -0.59
PCNX2-222	ENST00000520463	C1QTNF8	P60827	252 aa		11.33	□□□□□ -0.6
PCNX2-222	ENST00000520463	RBM42	Q9BTD8	480 aa	Known RBP	11.33	□□□□□ -0.6
PCNX2-222	ENST00000520463	PARD3	Q8TEW0	1356 aa		11.32	□□□□□ -0.6
PCNX2-222	ENST00000520463	FAM98C	Q17RN3	349 aa	Known RBP	11.32	□□□□□ -0.6
PCNX2-222	ENST00000520463	SPON1	Q9HCB6	807 aa		11.32	□□□□□ -0.6
PCNX2-222	ENST00000520463		A0A0G2JS52	829 aa		11.31	□□□□□ -0.6
PCNX2-222	ENST00000520463	MYT1	Q01538	1121 aa		11.31	□□□□□ -0.6
PCNX2-222	ENST00000520463	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.31	□□□□□ -0.6
PCNX2-222	ENST00000520463	TNS1	Q9HBL0	1735 aa	Known RBP	11.3	□□□□□ -0.6
PCNX2-222	ENST00000520463	CDC42BPG	Q6DT37	1551 aa		11.3	□□□□□ -0.6
PCNX2-222	ENST00000520463	FAM83G	A6ND36	823 aa		11.3	□□□□□ -0.6
PCNX2-222	ENST00000520463	KCNQ2	O43526	872 aa		11.3	□□□□□ -0.6
PCNX2-222	ENST00000520463	FAM182B	Q5T319	152 aa		11.3	□□□□□ -0.6
PCNX2-222	ENST00000520463	KRT28	Q7Z3Y7	464 aa		11.3	□□□□□ -0.6
PCNX2-222	ENST00000520463	CEP350	Q5VT06	3117 aa		11.3	□□□□□ -0.6
PCNX2-222	ENST00000520463	PLCH1	Q4KWH8	1693 aa		11.3	□□□□□ -0.6
PCNX2-222	ENST00000520463	NEXMIF	Q5QGS0	1516 aa		11.3	□□□□□ -0.6
PCNX2-222	ENST00000520463	HAP1	P54257	671 aa	Predicted RBP	11.29	□□□□□ -0.6
PCNX2-222	ENST00000520463	NBPF8	Q3BBV2	869 aa		11.29	□□□□□ -0.6
PCNX2-222	ENST00000520463	NBPF14	Q5TI25	921 aa		11.29	□□□□□ -0.6
PCNX2-222	ENST00000520463	CCDC144A	A2RUR9	1427 aa		11.28	□□□□□ -0.6
PCNX2-222	ENST00000520463	VGF	O15240	615 aa	Predicted RBP	11.28	□□□□□ -0.6
PCNX2-222	ENST00000520463	CABLES1	Q8TDN4	633 aa		11.28	□□□□□ -0.6
PCNX2-222	ENST00000520463	TRIM37	O94972	964 aa		11.27	□□□□□ -0.61
PCNX2-222	ENST00000520463	APBA3	O96018	575 aa		11.27	□□□□□ -0.61
PCNX2-222	ENST00000520463	FAM196A	Q6ZSG2	479 aa		11.27	□□□□□ -0.61
PCNX2-222	ENST00000520463	NUP155	O75694	1391 aa		11.27	□□□□□ -0.61
PCNX2-222	ENST00000520463	SPATA31A5	Q5VU36	1347 aa		11.26	□□□□□ -0.61
PCNX2-222	ENST00000520463	SPATA31A7	Q8IWB4	1347 aa		11.26	□□□□□ -0.61
PCNX2-222	ENST00000520463	ADGRB2	O60241	1585 aa		11.25	□□□□□ -0.61
PCNX2-222	ENST00000520463	CAMTA1	Q9Y6Y1	1673 aa		11.25	□□□□□ -0.61
PCNX2-222	ENST00000520463	NUTM2F	A1L443	756 aa		11.25	□□□□□ -0.61
PCNX2-222	ENST00000520463	PSME1	Q06323	249 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms