RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 PTCH1Q13635 1447 aa22■■□□□ 1.11
SNHG6-201ENST00000520348 USP32Q8NFA0 1604 aa22■■□□□ 1.11
SNHG6-201ENST00000520348 PLEKHH1Q9ULM0 1364 aa21.99■■□□□ 1.11
SNHG6-201ENST00000520348 RALBP1Q15311 655 aa21.99■■□□□ 1.11
SNHG6-201ENST00000520348 POGKQ9P215 609 aa21.97■■□□□ 1.11
SNHG6-201ENST00000520348 ATAD2Q6PL18 1390 aa21.97■■□□□ 1.11
SNHG6-201ENST00000520348 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
SNHG6-201ENST00000520348 ROBO2Q9HCK4 1378 aa21.96■■□□□ 1.11
SNHG6-201ENST00000520348 AMER1Q5JTC6 1135 aaPredicted RBP21.95■■□□□ 1.1
SNHG6-201ENST00000520348 ANKLE2Q86XL3 938 aa21.93■■□□□ 1.1
SNHG6-201ENST00000520348 ANKRD36BQ8N2N9 1353 aa21.92■■□□□ 1.1
SNHG6-201ENST00000520348 MINK1Q8N4C8 1332 aaPredicted RBP21.92■■□□□ 1.1
SNHG6-201ENST00000520348 MYBBP1AQ9BQG0 1328 aaKnown RBP21.92■■□□□ 1.1
SNHG6-201ENST00000520348 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.92■■□□□ 1.1
SNHG6-201ENST00000520348 WAPLQ7Z5K2 1190 aa21.91■■□□□ 1.1
SNHG6-201ENST00000520348 BRD4O60885 1362 aaPredicted RBP21.9■■□□□ 1.1
SNHG6-201ENST00000520348 SAFB2Q14151 953 aaKnown RBP eCLIP21.9■■□□□ 1.1
SNHG6-201ENST00000520348 BCANQ96GW7 911 aa21.9■■□□□ 1.1
SNHG6-201ENST00000520348 SLC26A8Q96RN1 970 aa21.9■■□□□ 1.1
SNHG6-201ENST00000520348 CD163L1Q9NR16 1453 aa21.9■■□□□ 1.1
SNHG6-201ENST00000520348 CCDC184Q52MB2 194 aa21.89■■□□□ 1.09
SNHG6-201ENST00000520348 CARD14Q9BXL6 1004 aa21.89■■□□□ 1.09
SNHG6-201ENST00000520348 KNSTRNQ9Y448 316 aa21.89■■□□□ 1.09
SNHG6-201ENST00000520348 CHD2O14647 1828 aaKnown RBP21.89■■□□□ 1.09
SNHG6-201ENST00000520348 NPHP4O75161 1426 aaPredicted RBP21.89■■□□□ 1.09
SNHG6-201ENST00000520348 CABP2Q9NPB3 220 aa21.88■■□□□ 1.09
SNHG6-201ENST00000520348 ATP7BP35670 1465 aa21.88■■□□□ 1.09
SNHG6-201ENST00000520348 NWD1Q149M9 1564 aa21.87■■□□□ 1.09
SNHG6-201ENST00000520348 CDK19Q9BWU1 502 aa21.86■■□□□ 1.09
SNHG6-201ENST00000520348 SLC12A5Q9H2X9 1139 aa21.86■■□□□ 1.09
SNHG6-201ENST00000520348 NSD3Q9BZ95 1437 aa21.86■■□□□ 1.09
SNHG6-201ENST00000520348 TOPAZ1Q8N9V7 1692 aa21.85■■□□□ 1.09
SNHG6-201ENST00000520348 WASLO00401 505 aaPredicted RBP21.85■■□□□ 1.09
SNHG6-201ENST00000520348 CENPBP07199 599 aaPredicted RBP21.85■■□□□ 1.09
SNHG6-201ENST00000520348 YTHDC1Q96MU7 727 aaKnown RBP21.85■■□□□ 1.09
SNHG6-201ENST00000520348 KDM4FA0A1W2PPD8 638 aa21.84■■□□□ 1.09
SNHG6-201ENST00000520348 SRPK2P78362 688 aaKnown RBP21.84■■□□□ 1.09
SNHG6-201ENST00000520348 NLRP13Q86W25 1043 aa21.84■■□□□ 1.09
SNHG6-201ENST00000520348 MRS2Q9HD23 443 aa21.84■■□□□ 1.09
SNHG6-201ENST00000520348 AMOTL2Q9Y2J4 779 aa21.84■■□□□ 1.09
SNHG6-201ENST00000520348 A0A1W2PP64 1363 aa21.83■■□□□ 1.08
SNHG6-201ENST00000520348 NSD2O96028 1365 aa21.83■■□□□ 1.08
SNHG6-201ENST00000520348 CDC42BPGQ6DT37 1551 aa21.8■■□□□ 1.08
SNHG6-201ENST00000520348 CC2D1BQ5T0F9 858 aaKnown RBP21.8■■□□□ 1.08
SNHG6-201ENST00000520348 TMC1Q8TDI8 760 aa21.8■■□□□ 1.08
SNHG6-201ENST00000520348 CPSF1Q10570 1443 aaKnown RBP21.8■■□□□ 1.08
SNHG6-201ENST00000520348 ANKRD26Q9UPS8 1709 aa21.77■■□□□ 1.08
SNHG6-201ENST00000520348 LMTK3Q96Q04 1460 aa21.77■■□□□ 1.08
SNHG6-201ENST00000520348 INSRP06213 1382 aa21.77■■□□□ 1.08
SNHG6-201ENST00000520348 MON2Q7Z3U7 1717 aa21.77■■□□□ 1.08
SNHG6-201ENST00000520348 PNISRQ8TF01 805 aaKnown RBP21.76■■□□□ 1.07
SNHG6-201ENST00000520348 TERF2IPQ9NYB0 399 aa21.76■■□□□ 1.07
SNHG6-201ENST00000520348 AKAP12Q02952 1782 aa21.76■■□□□ 1.07
SNHG6-201ENST00000520348 PPIP5K1Q6PFW1 1433 aa21.75■■□□□ 1.07
SNHG6-201ENST00000520348 KCNA6P17658 529 aa21.75■■□□□ 1.07
SNHG6-201ENST00000520348 CGNL1Q0VF96 1302 aa21.75■■□□□ 1.07
SNHG6-201ENST00000520348 PRR36Q9H6K5 1346 aa21.75■■□□□ 1.07
SNHG6-201ENST00000520348 PPP2R1AP30153 589 aa21.74■■□□□ 1.07
SNHG6-201ENST00000520348 FMN2Q9NZ56 1722 aa21.74■■□□□ 1.07
SNHG6-201ENST00000520348 ANKARQ7Z5J8 1434 aa21.73■■□□□ 1.07
SNHG6-201ENST00000520348 ITSN1Q15811 1721 aa21.73■■□□□ 1.07
SNHG6-201ENST00000520348 NALCNQ8IZF0 1738 aa21.73■■□□□ 1.07
SNHG6-201ENST00000520348 NUDT16Q96DE0 195 aaKnown RBP21.73■■□□□ 1.07
SNHG6-201ENST00000520348 NCKAP5LQ9HCH0 1330 aa21.73■■□□□ 1.07
SNHG6-201ENST00000520348 NKTRP30414 1462 aaKnown RBP21.72■■□□□ 1.07
SNHG6-201ENST00000520348 CABP1Q9NZU7 370 aa21.72■■□□□ 1.07
SNHG6-201ENST00000520348 CCDC61Q9Y6R9 512 aa21.72■■□□□ 1.07
SNHG6-201ENST00000520348 KIF20BQ96Q89 1820 aa21.71■■□□□ 1.07
SNHG6-201ENST00000520348 NRKQ7Z2Y5 1582 aa21.71■■□□□ 1.07
SNHG6-201ENST00000520348 EDC4Q6P2E9 1401 aaKnown RBP21.71■■□□□ 1.07
SNHG6-201ENST00000520348 CNGB1Q14028 1251 aaPredicted RBP21.7■■□□□ 1.06
SNHG6-201ENST00000520348 HDGFL2Q7Z4V5 671 aaPredicted RBP21.7■■□□□ 1.06
SNHG6-201ENST00000520348 ADGRL3Q9HAR2 1447 aa21.7■■□□□ 1.06
SNHG6-201ENST00000520348 PLEKHG3A1L390 1219 aa21.68■■□□□ 1.06
SNHG6-201ENST00000520348 POLR3AO14802 1390 aaPredicted RBP21.65■■□□□ 1.06
SNHG6-201ENST00000520348 FAM9BQ8IZU0 186 aa21.65■■□□□ 1.06
SNHG6-201ENST00000520348 STRCQ7RTU9 1775 aa21.65■■□□□ 1.06
SNHG6-201ENST00000520348 BLMP54132 1417 aaPredicted RBP21.64■■□□□ 1.06
SNHG6-201ENST00000520348 SSH2Q76I76 1423 aa21.63■■□□□ 1.05
SNHG6-201ENST00000520348 FYB1O15117 783 aa21.62■■□□□ 1.05
SNHG6-201ENST00000520348 MORC1Q86VD1 984 aa21.62■■□□□ 1.05
SNHG6-201ENST00000520348 ZNF692Q9BU19 519 aaPredicted RBP21.62■■□□□ 1.05
SNHG6-201ENST00000520348 NCOA3Q9Y6Q9 1424 aa21.61■■□□□ 1.05
SNHG6-201ENST00000520348 STRCP1A6NGW2 1772 aa21.61■■□□□ 1.05
SNHG6-201ENST00000520348 ZBED9Q6R2W3 1325 aa21.6■■□□□ 1.05
SNHG6-201ENST00000520348 HNRNPUQ00839 825 aaKnown RBP eCLIP21.6■■□□□ 1.05
SNHG6-201ENST00000520348 USP6P35125 1406 aa21.6■■□□□ 1.05
SNHG6-201ENST00000520348 SCAF1Q9H7N4 1312 aaKnown RBP21.59■■□□□ 1.05
SNHG6-201ENST00000520348 SHPRHQ149N8 1683 aa21.59■■□□□ 1.05
SNHG6-201ENST00000520348 RGPD8O14715 1765 aaPredicted RBP21.59■■□□□ 1.05
SNHG6-201ENST00000520348 HSPA2P54652 639 aa21.57■■□□□ 1.04
SNHG6-201ENST00000520348 USP54Q70EL1 1684 aa21.56■■□□□ 1.04
SNHG6-201ENST00000520348 ACEP12821 1306 aa21.55■■□□□ 1.04
SNHG6-201ENST00000520348 SMG6Q86US8 1419 aaKnown RBP21.55■■□□□ 1.04
SNHG6-201ENST00000520348 COL3A1P02461 1466 aaPredicted RBP21.55■■□□□ 1.04
SNHG6-201ENST00000520348 DCCP43146 1447 aa21.55■■□□□ 1.04
SNHG6-201ENST00000520348 GGNBP2Q9H3C7 697 aa21.54■■□□□ 1.04
SNHG6-201ENST00000520348 LRRC7Q96NW7 1537 aa21.54■■□□□ 1.04
SNHG6-201ENST00000520348 OVOS2A0A0J9YW53 1432 aa21.54■■□□□ 1.04
SNHG6-201ENST00000520348 OVOS2Q6IE36 1432 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms