RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 PCMTD1Q96MG8 357 aaPredicted RBP10.49□□□□□ -0.73
CSMD1-206ENST00000520002 IRX3P78415 501 aaPredicted RBP10.49□□□□□ -0.73
CSMD1-206ENST00000520002 RAD21O60216 631 aa10.49□□□□□ -0.73
CSMD1-206ENST00000520002 C1orf141Q5JVX7 400 aa10.49□□□□□ -0.73
CSMD1-206ENST00000520002 COG3Q96JB2 828 aa10.49□□□□□ -0.73
CSMD1-206ENST00000520002 VPS37CA5D8V6 355 aaPredicted RBP10.49□□□□□ -0.73
CSMD1-206ENST00000520002 TRIM5Q9C035 493 aa10.49□□□□□ -0.73
CSMD1-206ENST00000520002 STK11IPQ8N1F8 1099 aa10.48□□□□□ -0.73
CSMD1-206ENST00000520002 DHX57Q6P158 1386 aaKnown RBP10.48□□□□□ -0.73
CSMD1-206ENST00000520002 FAM193AP78312 1265 aa10.48□□□□□ -0.73
CSMD1-206ENST00000520002 CPLX1O14810 134 aa10.48□□□□□ -0.73
CSMD1-206ENST00000520002 ZKSCAN1P17029 563 aaPredicted RBP10.47□□□□□ -0.73
CSMD1-206ENST00000520002 EIF2S2P20042 333 aaKnown RBP10.47□□□□□ -0.73
CSMD1-206ENST00000520002 NAP1L1P55209 391 aaKnown RBP10.47□□□□□ -0.73
CSMD1-206ENST00000520002 SYNE3Q6ZMZ3 975 aa10.47□□□□□ -0.73
CSMD1-206ENST00000520002 TICAM2Q86XR7 235 aa10.47□□□□□ -0.73
CSMD1-206ENST00000520002 SASS6Q6UVJ0 657 aa10.47□□□□□ -0.73
CSMD1-206ENST00000520002 RUFY2Q8WXA3 655 aa10.47□□□□□ -0.73
CSMD1-206ENST00000520002 SPDYE4A6NLX3 237 aa10.47□□□□□ -0.73
CSMD1-206ENST00000520002 EVC2Q86UK5 1308 aa10.47□□□□□ -0.73
CSMD1-206ENST00000520002 PDS5BQ9NTI5 1447 aa10.47□□□□□ -0.73
CSMD1-206ENST00000520002 IPO7O95373 1038 aaKnown RBP10.47□□□□□ -0.73
CSMD1-206ENST00000520002 DCTN1Q14203 1278 aa10.47□□□□□ -0.73
CSMD1-206ENST00000520002 PRKRIP1Q9H875 184 aaPredicted RBP10.47□□□□□ -0.73
CSMD1-206ENST00000520002 CCDC112Q8NEF3 446 aa10.47□□□□□ -0.73
CSMD1-206ENST00000520002 TRIM29Q14134 588 aa10.47□□□□□ -0.73
CSMD1-206ENST00000520002 SMC2O95347 1197 aa10.46□□□□□ -0.73
CSMD1-206ENST00000520002 MINK1Q8N4C8 1332 aaPredicted RBP10.46□□□□□ -0.73
CSMD1-206ENST00000520002 IFIT2P09913 472 aaKnown RBP10.46□□□□□ -0.73
CSMD1-206ENST00000520002 XPCQ01831 940 aaPredicted RBP10.46□□□□□ -0.74
CSMD1-206ENST00000520002 RSPH4AQ5TD94 716 aa10.46□□□□□ -0.74
CSMD1-206ENST00000520002 NEXNQ0ZGT2 675 aa10.46□□□□□ -0.74
CSMD1-206ENST00000520002 DDX19BQ9UMR2 479 aa10.46□□□□□ -0.74
CSMD1-206ENST00000520002 ANKRD20A12PQ8NF67 263 aa10.46□□□□□ -0.74
CSMD1-206ENST00000520002 PDCL3Q9H2J4 239 aa10.46□□□□□ -0.74
CSMD1-206ENST00000520002 APAF1O14727 1248 aa10.45□□□□□ -0.74
CSMD1-206ENST00000520002 CDR1P51861 262 aa10.45□□□□□ -0.74
CSMD1-206ENST00000520002 NUCB2P80303 420 aa10.45□□□□□ -0.74
CSMD1-206ENST00000520002 DYDC1Q8WWB3 177 aa10.45□□□□□ -0.74
CSMD1-206ENST00000520002 CT47B1P0C2W7 299 aaPredicted RBP10.45□□□□□ -0.74
CSMD1-206ENST00000520002 PPP4R3BQ5MIZ7 849 aa10.45□□□□□ -0.74
CSMD1-206ENST00000520002 LRRFIP1Q32MZ4 808 aaKnown RBP10.45□□□□□ -0.74
CSMD1-206ENST00000520002 TTC5Q8N0Z6 440 aa10.45□□□□□ -0.74
CSMD1-206ENST00000520002 CHMP4CQ96CF2 233 aa10.45□□□□□ -0.74
CSMD1-206ENST00000520002 ROCK1Q13464 1354 aa10.45□□□□□ -0.74
CSMD1-206ENST00000520002 PDIA4P13667 645 aaKnown RBP10.45□□□□□ -0.74
CSMD1-206ENST00000520002 TEFQ10587 303 aa10.45□□□□□ -0.74
CSMD1-206ENST00000520002 DZIP1LQ8IYY4 767 aaKnown RBP10.45□□□□□ -0.74
CSMD1-206ENST00000520002 CCDC27Q2M243 656 aa10.44□□□□□ -0.74
CSMD1-206ENST00000520002 NFXL1Q6ZNB6 911 aa10.44□□□□□ -0.74
CSMD1-206ENST00000520002 PRPF40AO75400 957 aaKnown RBP10.44□□□□□ -0.74
CSMD1-206ENST00000520002 TRIM34Q9BYJ4 488 aa10.44□□□□□ -0.74
CSMD1-206ENST00000520002 HOOK1Q9UJC3 728 aaKnown RBP10.44□□□□□ -0.74
CSMD1-206ENST00000520002 VPS37DQ86XT2 251 aa10.44□□□□□ -0.74
CSMD1-206ENST00000520002 SMARCA4P51532 1647 aa10.44□□□□□ -0.74
CSMD1-206ENST00000520002 NOL10Q9BSC4 688 aaKnown RBP10.44□□□□□ -0.74
CSMD1-206ENST00000520002 DHX16O60231 1041 aaKnown RBP10.43□□□□□ -0.74
CSMD1-206ENST00000520002 POLR3GO15318 223 aaPredicted RBP10.43□□□□□ -0.74
CSMD1-206ENST00000520002 GTF2A1P52655 376 aaPredicted RBP10.43□□□□□ -0.74
CSMD1-206ENST00000520002 GTF2F1P35269 517 aaKnown RBP eCLIP10.43□□□□□ -0.74
CSMD1-206ENST00000520002 CPLX2Q6PUV4 134 aaKnown RBP10.43□□□□□ -0.74
CSMD1-206ENST00000520002 VGLL3A8MV65 326 aa10.42□□□□□ -0.74
CSMD1-206ENST00000520002 CALCOCO1Q9P1Z2 691 aa10.42□□□□□ -0.74
CSMD1-206ENST00000520002 USP8P40818 1118 aa10.42□□□□□ -0.74
CSMD1-206ENST00000520002 RIPK4P57078 832 aa10.42□□□□□ -0.74
CSMD1-206ENST00000520002 ERCC4Q92889 916 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-206ENST00000520002 AMOTL1Q8IY63 956 aa10.42□□□□□ -0.74
CSMD1-206ENST00000520002 PANK1Q8TE04 598 aa10.42□□□□□ -0.74
CSMD1-206ENST00000520002 RNF20Q5VTR2 975 aa10.42□□□□□ -0.74
CSMD1-206ENST00000520002 SMC3Q9UQE7 1217 aa10.41□□□□□ -0.74
CSMD1-206ENST00000520002 FKBP5Q13451 457 aaPredicted RBP10.41□□□□□ -0.74
CSMD1-206ENST00000520002 LNPKQ9C0E8 428 aa10.41□□□□□ -0.74
CSMD1-206ENST00000520002 CUX1P39880 1505 aa10.41□□□□□ -0.74
CSMD1-206ENST00000520002 G3BP1Q13283 466 aaKnown RBP eCLIP10.41□□□□□ -0.74
CSMD1-206ENST00000520002 TRDNQ13061 729 aa10.41□□□□□ -0.74
CSMD1-206ENST00000520002 CCDC73Q6ZRK6 1079 aa10.4□□□□□ -0.74
CSMD1-206ENST00000520002 ZSCAN30Q86W11 494 aa10.4□□□□□ -0.74
CSMD1-206ENST00000520002 FAM177A1Q8N128 213 aaPredicted RBP10.4□□□□□ -0.74
CSMD1-206ENST00000520002 AKNAQ7Z591 1439 aa10.4□□□□□ -0.74
CSMD1-206ENST00000520002 SYTL4Q96C24 671 aaPredicted RBP10.4□□□□□ -0.74
CSMD1-206ENST00000520002 EVA1CP58658 441 aa10.4□□□□□ -0.74
CSMD1-206ENST00000520002 INTS3Q68E01 1043 aaKnown RBP10.4□□□□□ -0.74
CSMD1-206ENST00000520002 DIAPH1O60610 1272 aaKnown RBP10.39□□□□□ -0.75
CSMD1-206ENST00000520002 CCDC102AQ96A19 550 aa10.39□□□□□ -0.75
CSMD1-206ENST00000520002 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.39□□□□□ -0.75
CSMD1-206ENST00000520002 CTDP1Q9Y5B0 961 aaPredicted RBP10.39□□□□□ -0.75
CSMD1-206ENST00000520002 TIGD1Q96MW7 591 aa10.38□□□□□ -0.75
CSMD1-206ENST00000520002 CCDC43Q96MW1 224 aaKnown RBP10.38□□□□□ -0.75
CSMD1-206ENST00000520002 CCDC47Q96A33 483 aaKnown RBP10.38□□□□□ -0.75
CSMD1-206ENST00000520002 FMNL2Q96PY5 1086 aa10.38□□□□□ -0.75
CSMD1-206ENST00000520002 API5Q9BZZ5 524 aaKnown RBP10.38□□□□□ -0.75
CSMD1-206ENST00000520002 HMOX1P09601 288 aa10.38□□□□□ -0.75
CSMD1-206ENST00000520002 FIBPO43427 364 aa10.38□□□□□ -0.75
CSMD1-206ENST00000520002 SAFBQ15424 915 aaKnown RBP eCLIP10.37□□□□□ -0.75
CSMD1-206ENST00000520002 INCENPQ9NQS7 918 aa10.37□□□□□ -0.75
CSMD1-206ENST00000520002 ERC2O15083 957 aa10.37□□□□□ -0.75
CSMD1-206ENST00000520002 MCM4P33991 863 aa10.37□□□□□ -0.75
CSMD1-206ENST00000520002 RUNDC1Q96C34 613 aa10.37□□□□□ -0.75
CSMD1-206ENST00000520002 BACH2Q9BYV9 841 aa10.37□□□□□ -0.75
CSMD1-206ENST00000520002 CNTLNQ9NXG0 1405 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms