RNA–Protein interactions for RNA: ENST00000519860.3

ERGIC1-206, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 3 BASIC

Gene ERGIC1, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-206ENST00000519860 PNPLA6Q8IY17 1366 aa33.59■■■□□ 2.97
ERGIC1-206ENST00000519860 ABCC11Q96J66 1382 aa33.59■■■□□ 2.97
ERGIC1-206ENST00000519860 PLEKHH1Q9ULM0 1364 aa33.59■■■□□ 2.97
ERGIC1-206ENST00000519860 YTHDC2Q9H6S0 1430 aaKnown RBP33.57■■■□□ 2.96
ERGIC1-206ENST00000519860 KNDC1Q76NI1 1749 aa33.56■■■□□ 2.96
ERGIC1-206ENST00000519860 MYOM2P54296 1465 aa33.56■■■□□ 2.96
ERGIC1-206ENST00000519860 NUTM2FA1L443 756 aa33.55■■■□□ 2.96
ERGIC1-206ENST00000519860 CFAP70Q5T0N1 1121 aa33.55■■■□□ 2.96
ERGIC1-206ENST00000519860 ZNF772Q68DY9 489 aaPredicted RBP33.55■■■□□ 2.96
ERGIC1-206ENST00000519860 C14orf93Q9H972 538 aaKnown RBP33.55■■■□□ 2.96
ERGIC1-206ENST00000519860 NRXN1Q9ULB1 1477 aa33.55■■■□□ 2.96
ERGIC1-206ENST00000519860 LAMC1P11047 1609 aa33.54■■■□□ 2.96
ERGIC1-206ENST00000519860 ESCO1Q5FWF5 840 aa33.54■■■□□ 2.96
ERGIC1-206ENST00000519860 SOS2Q07890 1332 aaPredicted RBP33.52■■■□□ 2.96
ERGIC1-206ENST00000519860 AFF2P51816 1311 aa33.49■■■□□ 2.95
ERGIC1-206ENST00000519860 C8orf37Q96NL8 207 aa33.48■■■□□ 2.95
ERGIC1-206ENST00000519860 DHX57Q6P158 1386 aaKnown RBP33.47■■■□□ 2.95
ERGIC1-206ENST00000519860 XPCQ01831 940 aaPredicted RBP33.46■■■□□ 2.95
ERGIC1-206ENST00000519860 ADAMTS2O95450 1211 aa33.45■■■□□ 2.95
ERGIC1-206ENST00000519860 KDM2AQ9Y2K7 1162 aa33.45■■■□□ 2.95
ERGIC1-206ENST00000519860 FOXO3O43524 673 aa33.44■■■□□ 2.94
ERGIC1-206ENST00000519860 HRCP23327 699 aa33.44■■■□□ 2.94
ERGIC1-206ENST00000519860 NPHP3Q7Z494 1330 aa33.44■■■□□ 2.94
ERGIC1-206ENST00000519860 SAFB2Q14151 953 aaKnown RBP eCLIP33.43■■■□□ 2.94
ERGIC1-206ENST00000519860 DCAF11Q8TEB1 546 aa33.41■■■□□ 2.94
ERGIC1-206ENST00000519860 FMN2Q9NZ56 1722 aa33.41■■■□□ 2.94
ERGIC1-206ENST00000519860 SIRT1Q96EB6 747 aa33.4■■■□□ 2.94
ERGIC1-206ENST00000519860 PRAM1Q96QH2 718 aa33.4■■■□□ 2.94
ERGIC1-206ENST00000519860 PXDNQ92626 1479 aa33.39■■■□□ 2.94
ERGIC1-206ENST00000519860 RXRBP28702 533 aa33.39■■■□□ 2.94
ERGIC1-206ENST00000519860 NGLY1Q96IV0 654 aa33.37■■■□□ 2.93
ERGIC1-206ENST00000519860 POGKQ9P215 609 aa33.34■■■□□ 2.93
ERGIC1-206ENST00000519860 ADGRB1O14514 1584 aa33.34■■■□□ 2.93
ERGIC1-206ENST00000519860 TRAK1Q9UPV9 953 aa33.33■■■□□ 2.93
ERGIC1-206ENST00000519860 COL22A1Q8NFW1 1626 aaPredicted RBP33.32■■■□□ 2.92
ERGIC1-206ENST00000519860 QTRT2Q9H974 415 aaKnown RBP33.31■■■□□ 2.92
ERGIC1-206ENST00000519860 DLC1Q96QB1 1528 aa33.3■■■□□ 2.92
ERGIC1-206ENST00000519860 KIF1AQ12756 1690 aa33.29■■■□□ 2.92
ERGIC1-206ENST00000519860 RGPD8O14715 1765 aaPredicted RBP33.29■■■□□ 2.92
ERGIC1-206ENST00000519860 HIRIP3Q9BW71 556 aaPredicted RBP33.25■■■□□ 2.91
ERGIC1-206ENST00000519860 PHF8Q9UPP1 1060 aa33.25■■■□□ 2.91
ERGIC1-206ENST00000519860 KRT28Q7Z3Y7 464 aa33.24■■■□□ 2.91
ERGIC1-206ENST00000519860 USP21Q9UK80 565 aa33.24■■■□□ 2.91
ERGIC1-206ENST00000519860 CDK12Q9NYV4 1490 aaPredicted RBP33.24■■■□□ 2.91
ERGIC1-206ENST00000519860 RBM6P78332 1123 aaKnown RBP33.22■■■□□ 2.91
ERGIC1-206ENST00000519860 STAC3Q96MF2 364 aa33.22■■■□□ 2.91
ERGIC1-206ENST00000519860 SPATA31A3Q5VYP0 1347 aa33.22■■■□□ 2.91
ERGIC1-206ENST00000519860 MINK1Q8N4C8 1332 aaPredicted RBP33.22■■■□□ 2.91
ERGIC1-206ENST00000519860 RGS12O14924 1447 aa33.19■■■□□ 2.9
ERGIC1-206ENST00000519860 ADGRB2O60241 1585 aa33.18■■■□□ 2.9
ERGIC1-206ENST00000519860 FNBP4Q8N3X1 1017 aaPredicted RBP33.18■■■□□ 2.9
ERGIC1-206ENST00000519860 USP32Q8NFA0 1604 aa33.17■■■□□ 2.9
ERGIC1-206ENST00000519860 PMFBP1Q8TBY8 1022 aa33.17■■■□□ 2.9
ERGIC1-206ENST00000519860 PLEKHG5O94827 1062 aa33.16■■■□□ 2.9
ERGIC1-206ENST00000519860 UPF1Q92900 1129 aaKnown RBP eCLIP33.16■■■□□ 2.9
ERGIC1-206ENST00000519860 ANKARQ7Z5J8 1434 aa33.14■■■□□ 2.9
ERGIC1-206ENST00000519860 PSME1Q06323 249 aa33.14■■■□□ 2.9
ERGIC1-206ENST00000519860 TRPC5Q9UL62 973 aaPredicted RBP33.14■■■□□ 2.9
ERGIC1-206ENST00000519860 MARF1Q9Y4F3 1742 aaKnown RBP33.14■■■□□ 2.89
ERGIC1-206ENST00000519860 TNS3Q68CZ2 1445 aa33.13■■■□□ 2.89
ERGIC1-206ENST00000519860 LMOD2Q6P5Q4 547 aa33.12■■■□□ 2.89
ERGIC1-206ENST00000519860 PRR36Q9H6K5 1346 aa33.09■■■□□ 2.89
ERGIC1-206ENST00000519860 ARHGEF28Q8N1W1 1705 aaKnown RBP33.09■■■□□ 2.89
ERGIC1-206ENST00000519860 CABLES1Q8TDN4 633 aa33.09■■■□□ 2.89
ERGIC1-206ENST00000519860 BCL9LQ86UU0 1499 aa33.09■■■□□ 2.89
ERGIC1-206ENST00000519860 ATRNO75882 1429 aa33.09■■■□□ 2.89
ERGIC1-206ENST00000519860 WASLO00401 505 aaPredicted RBP33.08■■■□□ 2.89
ERGIC1-206ENST00000519860 HAP1P54257 671 aaPredicted RBP33.08■■■□□ 2.89
ERGIC1-206ENST00000519860 SBNO1A3KN83 1393 aa33.07■■■□□ 2.88
ERGIC1-206ENST00000519860 TULP4Q9NRJ4 1543 aa33.07■■■□□ 2.88
ERGIC1-206ENST00000519860 EIF3AQ14152 1382 aaKnown RBP33.06■■■□□ 2.88
ERGIC1-206ENST00000519860 ARHGEF10O15013 1369 aa33.01■■■□□ 2.88
ERGIC1-206ENST00000519860 NBPF1Q3BBV0 1214 aa33.01■■■□□ 2.87
ERGIC1-206ENST00000519860 GPRASP1Q5JY77 1395 aa32.99■■■□□ 2.87
ERGIC1-206ENST00000519860 KIAA1210Q9ULL0 1709 aa32.99■■■□□ 2.87
ERGIC1-206ENST00000519860 SLIT2O94813 1529 aa32.98■■■□□ 2.87
ERGIC1-206ENST00000519860 TRPM3Q9HCF6 1732 aaPredicted RBP32.97■■■□□ 2.87
ERGIC1-206ENST00000519860 NGDNQ8NEJ9 315 aaKnown RBP32.97■■■□□ 2.87
ERGIC1-206ENST00000519860 GJD4Q96KN9 370 aaPredicted RBP32.97■■■□□ 2.87
ERGIC1-206ENST00000519860 ABCA3Q99758 1704 aa32.97■■■□□ 2.87
ERGIC1-206ENST00000519860 UNC5CLQ8IV45 518 aa32.96■■■□□ 2.87
ERGIC1-206ENST00000519860 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.94■■■□□ 2.86
ERGIC1-206ENST00000519860 ATP7BP35670 1465 aa32.94■■■□□ 2.86
ERGIC1-206ENST00000519860 NUDT16Q96DE0 195 aaKnown RBP32.94■■■□□ 2.86
ERGIC1-206ENST00000519860 SIN3AQ96ST3 1273 aa32.93■■■□□ 2.86
ERGIC1-206ENST00000519860 CDK19Q9BWU1 502 aa32.93■■■□□ 2.86
ERGIC1-206ENST00000519860 PAK3O75914 559 aaPredicted RBP32.91■■■□□ 2.86
ERGIC1-206ENST00000519860 L3MBTL2Q969R5 705 aa32.91■■■□□ 2.86
ERGIC1-206ENST00000519860 ATAD2Q6PL18 1390 aa32.91■■■□□ 2.86
ERGIC1-206ENST00000519860 ALS2Q96Q42 1657 aa32.91■■■□□ 2.86
ERGIC1-206ENST00000519860 RALGAPBQ86X10 1494 aa32.9■■■□□ 2.86
ERGIC1-206ENST00000519860 ITSN1Q15811 1721 aa32.9■■■□□ 2.86
ERGIC1-206ENST00000519860 PLCH1Q4KWH8 1693 aa32.89■■■□□ 2.86
ERGIC1-206ENST00000519860 NEUROD1Q13562 356 aa32.88■■■□□ 2.85
ERGIC1-206ENST00000519860 GLI3P10071 1580 aa32.87■■■□□ 2.85
ERGIC1-206ENST00000519860 FAM83GA6ND36 823 aa32.86■■■□□ 2.85
ERGIC1-206ENST00000519860 CCDC9Q9Y3X0 531 aaKnown RBP32.84■■■□□ 2.85
ERGIC1-206ENST00000519860 CENPJQ9HC77 1338 aaPredicted RBP32.82■■■□□ 2.84
ERGIC1-206ENST00000519860 NWD2Q9ULI1 1742 aa32.82■■■□□ 2.84
ERGIC1-206ENST00000519860 VPS72Q15906 364 aa32.81■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms