RNA–Protein interactions for RNA: ENST00000519686.6

VNN3-212, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-212ENST00000519686 SHPRHQ149N8 1683 aa13.47□□□□□ -0.25
VNN3-212ENST00000519686 MST1RQ04912 1400 aa13.47□□□□□ -0.25
VNN3-212ENST00000519686 POTEAQ6S8J7 498 aa13.46□□□□□ -0.25
VNN3-212ENST00000519686 MPHOSPH9Q99550 1183 aa13.46□□□□□ -0.25
VNN3-212ENST00000519686 PTCH1Q13635 1447 aa13.46□□□□□ -0.26
VNN3-212ENST00000519686 ACIN1Q9UKV3 1341 aaKnown RBP13.46□□□□□ -0.26
VNN3-212ENST00000519686 SETD1AO15047 1707 aaKnown RBP13.45□□□□□ -0.26
VNN3-212ENST00000519686 RGL3Q3MIN7 710 aa13.45□□□□□ -0.26
VNN3-212ENST00000519686 LRP6O75581 1613 aa13.44□□□□□ -0.26
VNN3-212ENST00000519686 NHSL1Q5SYE7 1610 aa13.44□□□□□ -0.26
VNN3-212ENST00000519686 NUTM2BA6NNL0 878 aaPredicted RBP13.44□□□□□ -0.26
VNN3-212ENST00000519686 NUTM2EB1AL46 878 aaPredicted RBP13.44□□□□□ -0.26
VNN3-212ENST00000519686 NUTM2AQ8IVF1 878 aaPredicted RBP13.44□□□□□ -0.26
VNN3-212ENST00000519686 ROBO2Q9HCK4 1378 aa13.43□□□□□ -0.26
VNN3-212ENST00000519686 LRRC59Q96AG4 307 aaKnown RBP13.43□□□□□ -0.26
VNN3-212ENST00000519686 ANKRD30BQ9BXX2 1392 aa13.42□□□□□ -0.26
VNN3-212ENST00000519686 ZNF772Q68DY9 489 aaPredicted RBP13.42□□□□□ -0.26
VNN3-212ENST00000519686 SETD5Q9C0A6 1442 aa13.42□□□□□ -0.26
VNN3-212ENST00000519686 C1orf167Q5SNV9 1468 aa13.41□□□□□ -0.26
VNN3-212ENST00000519686 ADGRF5Q8IZF2 1346 aa13.4□□□□□ -0.26
VNN3-212ENST00000519686 SPATA31E1Q6ZUB1 1445 aa13.4□□□□□ -0.26
VNN3-212ENST00000519686 PRAG1Q86YV5 1406 aa13.4□□□□□ -0.26
VNN3-212ENST00000519686 DDX17Q92841 729 aaKnown RBP13.4□□□□□ -0.26
VNN3-212ENST00000519686 IFT172Q9UG01 1749 aa13.4□□□□□ -0.26
VNN3-212ENST00000519686 STK26Q9P289 416 aa13.39□□□□□ -0.27
VNN3-212ENST00000519686 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
VNN3-212ENST00000519686 ORAI2Q96SN7 254 aa13.37□□□□□ -0.27
VNN3-212ENST00000519686 CDC42BPGQ6DT37 1551 aa13.36□□□□□ -0.27
VNN3-212ENST00000519686 PIK3C2GO75747 1445 aa13.36□□□□□ -0.27
VNN3-212ENST00000519686 PNPLA6Q8IY17 1366 aa13.35□□□□□ -0.27
VNN3-212ENST00000519686 RAB3GAP2Q9H2M9 1393 aa13.35□□□□□ -0.27
VNN3-212ENST00000519686 SPDYE2BA6NHP3 402 aa13.35□□□□□ -0.27
VNN3-212ENST00000519686 SPDYE6P0CI01 402 aa13.35□□□□□ -0.27
VNN3-212ENST00000519686 SPDYE2Q495Y8 402 aa13.35□□□□□ -0.27
VNN3-212ENST00000519686 ESCO1Q5FWF5 840 aa13.35□□□□□ -0.27
VNN3-212ENST00000519686 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
VNN3-212ENST00000519686 C8orf37Q96NL8 207 aa13.35□□□□□ -0.27
VNN3-212ENST00000519686 LAMC1P11047 1609 aa13.35□□□□□ -0.27
VNN3-212ENST00000519686 LRPPRCP42704 1394 aaKnown RBP13.34□□□□□ -0.27
VNN3-212ENST00000519686 RXRBP28702 533 aa13.34□□□□□ -0.27
VNN3-212ENST00000519686 TECPR2O15040 1411 aa13.34□□□□□ -0.27
VNN3-212ENST00000519686 AFF2P51816 1311 aa13.34□□□□□ -0.27
VNN3-212ENST00000519686 KNDC1Q76NI1 1749 aa13.34□□□□□ -0.27
VNN3-212ENST00000519686 WAPLQ7Z5K2 1190 aa13.33□□□□□ -0.27
VNN3-212ENST00000519686 ABCC11Q96J66 1382 aa13.33□□□□□ -0.28
VNN3-212ENST00000519686 FKBP8Q14318 412 aa13.32□□□□□ -0.28
VNN3-212ENST00000519686 YTHDC2Q9H6S0 1430 aaKnown RBP13.32□□□□□ -0.28
VNN3-212ENST00000519686 SOS2Q07890 1332 aaPredicted RBP13.32□□□□□ -0.28
VNN3-212ENST00000519686 NPHP3Q7Z494 1330 aa13.32□□□□□ -0.28
VNN3-212ENST00000519686 NUTM2FA1L443 756 aa13.32□□□□□ -0.28
VNN3-212ENST00000519686 ADAMTS2O95450 1211 aa13.32□□□□□ -0.28
VNN3-212ENST00000519686 NGLY1Q96IV0 654 aa13.32□□□□□ -0.28
VNN3-212ENST00000519686 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
VNN3-212ENST00000519686 MYOM2P54296 1465 aa13.31□□□□□ -0.28
VNN3-212ENST00000519686 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
VNN3-212ENST00000519686 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
VNN3-212ENST00000519686 C14orf93Q9H972 538 aaKnown RBP13.3□□□□□ -0.28
VNN3-212ENST00000519686 PLEKHH1Q9ULM0 1364 aa13.29□□□□□ -0.28
VNN3-212ENST00000519686 FOXO3O43524 673 aa13.29□□□□□ -0.28
VNN3-212ENST00000519686 CFAP70Q5T0N1 1121 aa13.29□□□□□ -0.28
VNN3-212ENST00000519686 QTRT2Q9H974 415 aaKnown RBP13.29□□□□□ -0.28
VNN3-212ENST00000519686 CDK12Q9NYV4 1490 aaPredicted RBP13.28□□□□□ -0.28
VNN3-212ENST00000519686 NRXN1Q9ULB1 1477 aa13.28□□□□□ -0.28
VNN3-212ENST00000519686 XPCQ01831 940 aaPredicted RBP13.28□□□□□ -0.28
VNN3-212ENST00000519686 FMN2Q9NZ56 1722 aa13.28□□□□□ -0.28
VNN3-212ENST00000519686 COL22A1Q8NFW1 1626 aaPredicted RBP13.27□□□□□ -0.29
VNN3-212ENST00000519686 SIRT1Q96EB6 747 aa13.27□□□□□ -0.29
VNN3-212ENST00000519686 PXDNQ92626 1479 aa13.27□□□□□ -0.29
VNN3-212ENST00000519686 KIF1AQ12756 1690 aa13.26□□□□□ -0.29
VNN3-212ENST00000519686 RBM6P78332 1123 aaKnown RBP13.26□□□□□ -0.29
VNN3-212ENST00000519686 SAFB2Q14151 953 aaKnown RBP eCLIP13.26□□□□□ -0.29
VNN3-212ENST00000519686 POGKQ9P215 609 aa13.26□□□□□ -0.29
VNN3-212ENST00000519686 USP21Q9UK80 565 aa13.26□□□□□ -0.29
VNN3-212ENST00000519686 SSUH2Q9Y2M2 353 aa13.26□□□□□ -0.29
VNN3-212ENST00000519686 DCAF11Q8TEB1 546 aa13.25□□□□□ -0.29
VNN3-212ENST00000519686 PRAM1Q96QH2 718 aa13.25□□□□□ -0.29
VNN3-212ENST00000519686 KDM2AQ9Y2K7 1162 aa13.25□□□□□ -0.29
VNN3-212ENST00000519686 HRCP23327 699 aa13.23□□□□□ -0.29
VNN3-212ENST00000519686 UPF1Q92900 1129 aaKnown RBP eCLIP13.23□□□□□ -0.29
VNN3-212ENST00000519686 TRPC5Q9UL62 973 aaPredicted RBP13.23□□□□□ -0.29
VNN3-212ENST00000519686 RGS12O14924 1447 aa13.22□□□□□ -0.29
VNN3-212ENST00000519686 RGPD8O14715 1765 aaPredicted RBP13.22□□□□□ -0.29
VNN3-212ENST00000519686 MARF1Q9Y4F3 1742 aaKnown RBP13.22□□□□□ -0.29
VNN3-212ENST00000519686 DLC1Q96QB1 1528 aa13.22□□□□□ -0.29
VNN3-212ENST00000519686 HAP1P54257 671 aaPredicted RBP13.21□□□□□ -0.29
VNN3-212ENST00000519686 PSME1Q06323 249 aa13.21□□□□□ -0.29
VNN3-212ENST00000519686 KRT28Q7Z3Y7 464 aa13.21□□□□□ -0.29
VNN3-212ENST00000519686 FNBP4Q8N3X1 1017 aaPredicted RBP13.21□□□□□ -0.29
VNN3-212ENST00000519686 AKT1S1Q96B36 256 aa13.21□□□□□ -0.29
VNN3-212ENST00000519686 STAC3Q96MF2 364 aa13.21□□□□□ -0.29
VNN3-212ENST00000519686 PHF8Q9UPP1 1060 aa13.21□□□□□ -0.29
VNN3-212ENST00000519686 TRAK1Q9UPV9 953 aa13.2□□□□□ -0.3
VNN3-212ENST00000519686 SPATA31A3Q5VYP0 1347 aa13.2□□□□□ -0.3
VNN3-212ENST00000519686 ADGRB1O14514 1584 aa13.2□□□□□ -0.3
VNN3-212ENST00000519686 LMOD2Q6P5Q4 547 aa13.19□□□□□ -0.3
VNN3-212ENST00000519686 HIRIP3Q9BW71 556 aaPredicted RBP13.19□□□□□ -0.3
VNN3-212ENST00000519686 TNS3Q68CZ2 1445 aa13.18□□□□□ -0.3
VNN3-212ENST00000519686 ADGRB2O60241 1585 aa13.18□□□□□ -0.3
VNN3-212ENST00000519686 EIF3AQ14152 1382 aaKnown RBP13.18□□□□□ -0.3
VNN3-212ENST00000519686 PLEKHG5O94827 1062 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms