RNA–Protein interactions for RNA: ENST00000519674.1

TRPS1-209, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 3,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-209ENST00000519674 ABCA6Q8N139 1617 aa10.84□□□□□ -0.67
TRPS1-209ENST00000519674 LMTK2Q8IWU2 1503 aa10.83□□□□□ -0.68
TRPS1-209ENST00000519674 NEURL4Q96JN8 1562 aa10.83□□□□□ -0.68
TRPS1-209ENST00000519674 SKAP1Q86WV1 359 aa10.83□□□□□ -0.68
TRPS1-209ENST00000519674 EIF3AQ14152 1382 aaKnown RBP10.83□□□□□ -0.68
TRPS1-209ENST00000519674 KIAA1210Q9ULL0 1709 aa10.83□□□□□ -0.68
TRPS1-209ENST00000519674 RIPK4P57078 832 aa10.82□□□□□ -0.68
TRPS1-209ENST00000519674 NPATQ14207 1427 aa10.82□□□□□ -0.68
TRPS1-209ENST00000519674 MYOM2P54296 1465 aa10.82□□□□□ -0.68
TRPS1-209ENST00000519674 IFT172Q9UG01 1749 aa10.82□□□□□ -0.68
TRPS1-209ENST00000519674 KIAA1211Q6ZU35 1233 aa10.82□□□□□ -0.68
TRPS1-209ENST00000519674 PAXIP1Q6ZW49 1069 aaPredicted RBP10.82□□□□□ -0.68
TRPS1-209ENST00000519674 ZHX1Q9UKY1 873 aaPredicted RBP10.82□□□□□ -0.68
TRPS1-209ENST00000519674 KNSTRNQ9Y448 316 aa10.82□□□□□ -0.68
TRPS1-209ENST00000519674 DMTNQ08495 405 aa10.81□□□□□ -0.68
TRPS1-209ENST00000519674 CDCA8Q53HL2 280 aa10.81□□□□□ -0.68
TRPS1-209ENST00000519674 C8orf34Q49A92 452 aa10.8□□□□□ -0.68
TRPS1-209ENST00000519674 SYNMO15061 1565 aa10.8□□□□□ -0.68
TRPS1-209ENST00000519674 NOS1P29475 1434 aa10.8□□□□□ -0.68
TRPS1-209ENST00000519674 MRE11P49959 708 aa10.8□□□□□ -0.68
TRPS1-209ENST00000519674 ADGRB3O60242 1522 aa10.8□□□□□ -0.68
TRPS1-209ENST00000519674 TMEM51Q9NW97 253 aa10.8□□□□□ -0.68
TRPS1-209ENST00000519674 NEO1Q92859 1461 aa10.8□□□□□ -0.68
TRPS1-209ENST00000519674 MYOM1P52179 1685 aa10.8□□□□□ -0.68
TRPS1-209ENST00000519674 VIRMAQ69YN4 1812 aaKnown RBP10.79□□□□□ -0.68
TRPS1-209ENST00000519674 FAM161AQ3B820 660 aa10.79□□□□□ -0.68
TRPS1-209ENST00000519674 ABCC3O15438 1527 aa10.79□□□□□ -0.68
TRPS1-209ENST00000519674 KDM5AP29375 1690 aaKnown RBP10.79□□□□□ -0.68
TRPS1-209ENST00000519674 CYB5RLQ6IPT4 315 aa10.78□□□□□ -0.68
TRPS1-209ENST00000519674 AMER1Q5JTC6 1135 aaPredicted RBP10.78□□□□□ -0.68
TRPS1-209ENST00000519674 MYH16Q9H6N6 1097 aa10.78□□□□□ -0.68
TRPS1-209ENST00000519674 MTERF4Q7Z6M4 381 aaKnown RBP10.77□□□□□ -0.69
TRPS1-209ENST00000519674 NRXN1Q9ULB1 1477 aa10.77□□□□□ -0.69
TRPS1-209ENST00000519674 DIP2CQ9Y2E4 1556 aa10.77□□□□□ -0.69
TRPS1-209ENST00000519674 CAMSAP1Q5T5Y3 1602 aa10.77□□□□□ -0.69
TRPS1-209ENST00000519674 ERVK-7P63135 1459 aa10.77□□□□□ -0.69
TRPS1-209ENST00000519674 PPP2R1AP30153 589 aa10.76□□□□□ -0.69
TRPS1-209ENST00000519674 ASXL1Q8IXJ9 1541 aa10.76□□□□□ -0.69
TRPS1-209ENST00000519674 PPLO60437 1756 aa10.76□□□□□ -0.69
TRPS1-209ENST00000519674 RICTORQ6R327 1708 aa10.76□□□□□ -0.69
TRPS1-209ENST00000519674 SIGLEC1Q9BZZ2 1709 aa10.76□□□□□ -0.69
TRPS1-209ENST00000519674 OFD1O75665 1012 aa10.76□□□□□ -0.69
TRPS1-209ENST00000519674 ZSCAN20P17040 1043 aaPredicted RBP10.76□□□□□ -0.69
TRPS1-209ENST00000519674 ANTXR1Q9H6X2 564 aa10.76□□□□□ -0.69
TRPS1-209ENST00000519674 ISY1Q9ULR0 285 aaKnown RBP10.76□□□□□ -0.69
TRPS1-209ENST00000519674 PPP4R3BQ5MIZ7 849 aa10.75□□□□□ -0.69
TRPS1-209ENST00000519674 BLMP54132 1417 aaPredicted RBP10.75□□□□□ -0.69
TRPS1-209ENST00000519674 NUTM2DQ5VT03 806 aaPredicted RBP10.75□□□□□ -0.69
TRPS1-209ENST00000519674 CDCA7LQ96GN5 454 aa10.75□□□□□ -0.69
TRPS1-209ENST00000519674 TRAK1Q9UPV9 953 aa10.75□□□□□ -0.69
TRPS1-209ENST00000519674 KDM2BQ8NHM5 1336 aa10.75□□□□□ -0.69
TRPS1-209ENST00000519674 PIK3C2GO75747 1445 aa10.75□□□□□ -0.69
TRPS1-209ENST00000519674 YEATS2Q9ULM3 1422 aa10.75□□□□□ -0.69
TRPS1-209ENST00000519674 TMEM132EQ6IEE7 984 aa10.74□□□□□ -0.69
TRPS1-209ENST00000519674 RCAN3Q9UKA8 241 aa10.74□□□□□ -0.69
TRPS1-209ENST00000519674 ADAMTS8Q9UP79 889 aa10.74□□□□□ -0.69
TRPS1-209ENST00000519674 KIF20AO95235 890 aa10.74□□□□□ -0.69
TRPS1-209ENST00000519674 GRPEL1Q9HAV7 217 aa10.73□□□□□ -0.69
TRPS1-209ENST00000519674 SETBP1Q9Y6X0 1596 aa10.73□□□□□ -0.69
TRPS1-209ENST00000519674 MYO3AQ8NEV4 1616 aa10.73□□□□□ -0.69
TRPS1-209ENST00000519674 PDE3BQ13370 1112 aa10.73□□□□□ -0.69
TRPS1-209ENST00000519674 ZNF830Q96NB3 372 aaPredicted RBP10.73□□□□□ -0.69
TRPS1-209ENST00000519674 FAM13BQ9NYF5 915 aa10.73□□□□□ -0.69
TRPS1-209ENST00000519674 WDR43Q15061 677 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRPS1-209ENST00000519674 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.72□□□□□ -0.69
TRPS1-209ENST00000519674 SENP3Q9H4L4 574 aaPredicted RBP10.72□□□□□ -0.69
TRPS1-209ENST00000519674 C14orf93Q9H972 538 aaKnown RBP10.72□□□□□ -0.69
TRPS1-209ENST00000519674 ZMYM4Q5VZL5 1548 aa10.72□□□□□ -0.69
TRPS1-209ENST00000519674 FTSJ3Q8IY81 847 aaKnown RBP10.72□□□□□ -0.69
TRPS1-209ENST00000519674 TRIM44Q96DX7 344 aaPredicted RBP10.72□□□□□ -0.69
TRPS1-209ENST00000519674 ADGRB1O14514 1584 aa10.71□□□□□ -0.69
TRPS1-209ENST00000519674 INSRP06213 1382 aa10.71□□□□□ -0.69
TRPS1-209ENST00000519674 SBNO2Q9Y2G9 1366 aa10.71□□□□□ -0.69
TRPS1-209ENST00000519674 USP19O94966 1318 aa10.71□□□□□ -0.69
TRPS1-209ENST00000519674 CARD14Q9BXL6 1004 aa10.71□□□□□ -0.69
TRPS1-209ENST00000519674 PRDM10Q9NQV6 1147 aa10.71□□□□□ -0.69
TRPS1-209ENST00000519674 QRICH2Q9H0J4 1663 aa10.71□□□□□ -0.7
TRPS1-209ENST00000519674 PIK3C2BO00750 1634 aa10.71□□□□□ -0.7
TRPS1-209ENST00000519674 NPC1L1Q9UHC9 1359 aa10.7□□□□□ -0.7
TRPS1-209ENST00000519674 RPGRIP1LQ68CZ1 1315 aa10.7□□□□□ -0.7
TRPS1-209ENST00000519674 FAM69CQ0P6D2 419 aa10.7□□□□□ -0.7
TRPS1-209ENST00000519674 CHRM1P11229 460 aaPredicted RBP10.7□□□□□ -0.7
TRPS1-209ENST00000519674 NCBP3Q53F19 620 aaKnown RBP10.7□□□□□ -0.7
TRPS1-209ENST00000519674 IDI1Q13907 227 aa10.69□□□□□ -0.7
TRPS1-209ENST00000519674 GTPBP4Q9BZE4 634 aaKnown RBP10.69□□□□□ -0.7
TRPS1-209ENST00000519674 ZC3H13Q5T200 1668 aaKnown RBP10.69□□□□□ -0.7
TRPS1-209ENST00000519674 TSPOAP1O95153 1857 aa10.69□□□□□ -0.7
TRPS1-209ENST00000519674 MCM4P33991 863 aa10.69□□□□□ -0.7
TRPS1-209ENST00000519674 RIMBP3CA6NJZ7 1639 aa10.69□□□□□ -0.7
TRPS1-209ENST00000519674 RIMBP3BA6NNM3 1639 aa10.69□□□□□ -0.7
TRPS1-209ENST00000519674 RIMBP3Q9UFD9 1639 aa10.69□□□□□ -0.7
TRPS1-209ENST00000519674 NEXMIFQ5QGS0 1516 aa10.69□□□□□ -0.7
TRPS1-209ENST00000519674 CCDC94Q9BW85 323 aaPredicted RBP10.69□□□□□ -0.7
TRPS1-209ENST00000519674 VGFO15240 615 aaPredicted RBP10.68□□□□□ -0.7
TRPS1-209ENST00000519674 GLI2P10070 1586 aa10.68□□□□□ -0.7
TRPS1-209ENST00000519674 BECN1Q14457 450 aa10.68□□□□□ -0.7
TRPS1-209ENST00000519674 CENPQQ7L2Z9 268 aaPredicted RBP10.68□□□□□ -0.7
TRPS1-209ENST00000519674 ARHGAP31Q2M1Z3 1444 aa10.68□□□□□ -0.7
TRPS1-209ENST00000519674 LETM1O95202 739 aaPredicted RBP10.68□□□□□ -0.7
TRPS1-209ENST00000519674 SLKQ9H2G2 1235 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms