RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 BRWD3Q6RI45 1802 aa11.44□□□□□ -0.58
CTNNA1-216ENST00000519489 CCDC18Q5T9S5 1454 aa11.44□□□□□ -0.58
CTNNA1-216ENST00000519489 ZFYVE9O95405 1425 aa11.43□□□□□ -0.58
CTNNA1-216ENST00000519489 ADAMTS13Q76LX8 1427 aa11.43□□□□□ -0.58
CTNNA1-216ENST00000519489 PLEKHG1Q9ULL1 1385 aa11.43□□□□□ -0.58
CTNNA1-216ENST00000519489 PRR29P0C7W0 189 aa11.43□□□□□ -0.58
CTNNA1-216ENST00000519489 MYOM2P54296 1465 aa11.43□□□□□ -0.58
CTNNA1-216ENST00000519489 SOS2Q07890 1332 aaPredicted RBP11.42□□□□□ -0.58
CTNNA1-216ENST00000519489 EZH2Q15910 746 aaKnown RBP11.42□□□□□ -0.58
CTNNA1-216ENST00000519489 CEP152O94986 1710 aa11.42□□□□□ -0.58
CTNNA1-216ENST00000519489 CCDC141Q6ZP82 1450 aa11.41□□□□□ -0.58
CTNNA1-216ENST00000519489 ONECUT3O60422 494 aaPredicted RBP11.4□□□□□ -0.58
CTNNA1-216ENST00000519489 KRT27Q7Z3Y8 459 aa11.4□□□□□ -0.58
CTNNA1-216ENST00000519489 DCCP43146 1447 aa11.4□□□□□ -0.58
CTNNA1-216ENST00000519489 NINLQ9Y2I6 1382 aa11.4□□□□□ -0.59
CTNNA1-216ENST00000519489 SPDYE4A6NLX3 237 aa11.39□□□□□ -0.59
CTNNA1-216ENST00000519489 FAM182BQ5T319 152 aa11.39□□□□□ -0.59
CTNNA1-216ENST00000519489 AMOTL2Q9Y2J4 779 aa11.39□□□□□ -0.59
CTNNA1-216ENST00000519489 UNC5CLQ8IV45 518 aa11.38□□□□□ -0.59
CTNNA1-216ENST00000519489 CAMKK2Q96RR4 588 aa11.38□□□□□ -0.59
CTNNA1-216ENST00000519489 SPHKAPQ2M3C7 1700 aa11.38□□□□□ -0.59
CTNNA1-216ENST00000519489 SLIT2O94813 1529 aa11.37□□□□□ -0.59
CTNNA1-216ENST00000519489 PPP1R15AO75807 674 aaPredicted RBP11.37□□□□□ -0.59
CTNNA1-216ENST00000519489 ORAI2Q96SN7 254 aa11.37□□□□□ -0.59
CTNNA1-216ENST00000519489 ADGRB3O60242 1522 aa11.36□□□□□ -0.59
CTNNA1-216ENST00000519489 MTUS2Q5JR59 1369 aa11.36□□□□□ -0.59
CTNNA1-216ENST00000519489 DISP2A7MBM2 1401 aa11.35□□□□□ -0.59
CTNNA1-216ENST00000519489 CHADLQ6NUI6 762 aa11.35□□□□□ -0.59
CTNNA1-216ENST00000519489 TRPM2O94759 1503 aa11.35□□□□□ -0.59
CTNNA1-216ENST00000519489 RIMS2Q9UQ26 1411 aa11.35□□□□□ -0.59
CTNNA1-216ENST00000519489 C1orf167Q5SNV9 1468 aa11.34□□□□□ -0.59
CTNNA1-216ENST00000519489 PPP1R1BQ9UD71 204 aaPredicted RBP11.34□□□□□ -0.59
CTNNA1-216ENST00000519489 LAMC1P11047 1609 aa11.34□□□□□ -0.59
CTNNA1-216ENST00000519489 COL22A1Q8NFW1 1626 aaPredicted RBP11.34□□□□□ -0.59
CTNNA1-216ENST00000519489 NOS1P29475 1434 aa11.34□□□□□ -0.59
CTNNA1-216ENST00000519489 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
CTNNA1-216ENST00000519489 KCNQ2O43526 872 aa11.33□□□□□ -0.6
CTNNA1-216ENST00000519489 GIGYF1O75420 1035 aaPredicted RBP11.33□□□□□ -0.6
CTNNA1-216ENST00000519489 EVX2Q03828 476 aa11.32□□□□□ -0.6
CTNNA1-216ENST00000519489 SPON1Q9HCB6 807 aa11.32□□□□□ -0.6
CTNNA1-216ENST00000519489 ADGRL3Q9HAR2 1447 aa11.32□□□□□ -0.6
CTNNA1-216ENST00000519489 PIK3R4Q99570 1358 aa11.31□□□□□ -0.6
CTNNA1-216ENST00000519489 UBTFP17480 764 aaKnown RBP11.31□□□□□ -0.6
CTNNA1-216ENST00000519489 VPS72Q15906 364 aa11.31□□□□□ -0.6
CTNNA1-216ENST00000519489 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.3□□□□□ -0.6
CTNNA1-216ENST00000519489 EIF2AK4Q9P2K8 1649 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-216ENST00000519489 RSPH4AQ5TD94 716 aa11.29□□□□□ -0.6
CTNNA1-216ENST00000519489 FYCO1Q9BQS8 1478 aa11.28□□□□□ -0.6
CTNNA1-216ENST00000519489 COL13A1Q5TAT6 717 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-216ENST00000519489 PDGFDQ9GZP0 370 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-216ENST00000519489 EEA1Q15075 1411 aa11.27□□□□□ -0.6
CTNNA1-216ENST00000519489 EHBP1L1Q8N3D4 1523 aa11.27□□□□□ -0.61
CTNNA1-216ENST00000519489 TSPY4P0CV99 314 aa11.27□□□□□ -0.61
CTNNA1-216ENST00000519489 TSPY10P0CW01 314 aa11.27□□□□□ -0.61
CTNNA1-216ENST00000519489 XPCQ01831 940 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-216ENST00000519489 TNS1Q9HBL0 1735 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-216ENST00000519489 ARHGEF5Q12774 1597 aa11.25□□□□□ -0.61
CTNNA1-216ENST00000519489 PTGER2P43116 358 aa11.25□□□□□ -0.61
CTNNA1-216ENST00000519489 FAM98CQ17RN3 349 aaKnown RBP11.25□□□□□ -0.61
CTNNA1-216ENST00000519489 SLC52A1Q9NWF4 448 aa11.25□□□□□ -0.61
CTNNA1-216ENST00000519489 XRN1Q8IZH2 1706 aaKnown RBP11.25□□□□□ -0.61
CTNNA1-216ENST00000519489 PXDNQ92626 1479 aa11.25□□□□□ -0.61
CTNNA1-216ENST00000519489 TRIM37O94972 964 aa11.24□□□□□ -0.61
CTNNA1-216ENST00000519489 METP08581 1390 aa11.24□□□□□ -0.61
CTNNA1-216ENST00000519489 MARF1Q9Y4F3 1742 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-216ENST00000519489 PRELPP51888 382 aa11.23□□□□□ -0.61
CTNNA1-216ENST00000519489 SYT17Q9BSW7 474 aa11.23□□□□□ -0.61
CTNNA1-216ENST00000519489 FARP1Q9Y4F1 1045 aaPredicted RBP11.23□□□□□ -0.61
CTNNA1-216ENST00000519489 CEP162Q5TB80 1403 aa11.23□□□□□ -0.61
CTNNA1-216ENST00000519489 NRKQ7Z2Y5 1582 aa11.23□□□□□ -0.61
CTNNA1-216ENST00000519489 RGPD1P0DJD0 1748 aa11.23□□□□□ -0.61
CTNNA1-216ENST00000519489 CCDC9Q9Y3X0 531 aaKnown RBP11.22□□□□□ -0.61
CTNNA1-216ENST00000519489 NALCNQ8IZF0 1738 aa11.21□□□□□ -0.61
CTNNA1-216ENST00000519489 TMEM131LA2VDJ0 1609 aa11.21□□□□□ -0.61
CTNNA1-216ENST00000519489 LMTK2Q8IWU2 1503 aa11.21□□□□□ -0.61
CTNNA1-216ENST00000519489 APBA3O96018 575 aa11.21□□□□□ -0.61
CTNNA1-216ENST00000519489 HSPA6P17066 643 aa11.21□□□□□ -0.61
CTNNA1-216ENST00000519489 FHDC1Q9C0D6 1143 aaPredicted RBP11.21□□□□□ -0.61
CTNNA1-216ENST00000519489 GOLGB1Q14789 3259 aaKnown RBP11.21□□□□□ -0.62
CTNNA1-216ENST00000519489 SHANK3Q9BYB0 1731 aa11.21□□□□□ -0.62
CTNNA1-216ENST00000519489 A0A0G2JS52 829 aa11.2□□□□□ -0.62
CTNNA1-216ENST00000519489 MYT1Q01538 1121 aa11.2□□□□□ -0.62
CTNNA1-216ENST00000519489 MYO5BQ9ULV0 1848 aa11.2□□□□□ -0.62
CTNNA1-216ENST00000519489 NUP188Q5SRE5 1749 aa11.2□□□□□ -0.62
CTNNA1-216ENST00000519489 PROM2Q8N271 834 aa11.19□□□□□ -0.62
CTNNA1-216ENST00000519489 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.19□□□□□ -0.62
CTNNA1-216ENST00000519489 CABLES1Q8TDN4 633 aa11.19□□□□□ -0.62
CTNNA1-216ENST00000519489 ANO8Q9HCE9 1232 aaPredicted RBP11.19□□□□□ -0.62
CTNNA1-216ENST00000519489 MYOM1P52179 1685 aa11.19□□□□□ -0.62
CTNNA1-216ENST00000519489 RREB1Q92766 1687 aa11.19□□□□□ -0.62
CTNNA1-216ENST00000519489 DUOX2Q9NRD8 1548 aa11.19□□□□□ -0.62
CTNNA1-216ENST00000519489 FOXO3O43524 673 aa11.18□□□□□ -0.62
CTNNA1-216ENST00000519489 ZBTB7AO95365 584 aa11.18□□□□□ -0.62
CTNNA1-216ENST00000519489 HDGFP51858 240 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-216ENST00000519489 CREBZFQ9NS37 354 aa11.18□□□□□ -0.62
CTNNA1-216ENST00000519489 PCDH10Q9P2E7 1040 aa11.18□□□□□ -0.62
CTNNA1-216ENST00000519489 PARD3Q8TEW0 1356 aa11.17□□□□□ -0.62
CTNNA1-216ENST00000519489 NRXN3Q9Y4C0 1643 aa11.17□□□□□ -0.62
CTNNA1-216ENST00000519489 NBPF8Q3BBV2 869 aa11.17□□□□□ -0.62
CTNNA1-216ENST00000519489 NBPF14Q5TI25 921 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms