RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 NPHP3Q7Z494 1330 aa16.06■□□□□ 0.16
PVT1-208ENST00000519481 NGLY1Q96IV0 654 aa16.06■□□□□ 0.16
PVT1-208ENST00000519481 ABCC11Q96J66 1382 aa16.05■□□□□ 0.16
PVT1-208ENST00000519481 ADAMTS2O95450 1211 aa16.05■□□□□ 0.16
PVT1-208ENST00000519481 TMEM132EQ6IEE7 984 aa16.05■□□□□ 0.16
PVT1-208ENST00000519481 WAPLQ7Z5K2 1190 aa16.05■□□□□ 0.16
PVT1-208ENST00000519481 CDC42BPGQ6DT37 1551 aa16.04■□□□□ 0.16
PVT1-208ENST00000519481 TECPR2O15040 1411 aa16.04■□□□□ 0.16
PVT1-208ENST00000519481 QTRT2Q9H974 415 aaKnown RBP16.04■□□□□ 0.16
PVT1-208ENST00000519481 PIK3C2GO75747 1445 aa16.03■□□□□ 0.16
PVT1-208ENST00000519481 LAMC1P11047 1609 aa16.03■□□□□ 0.16
PVT1-208ENST00000519481 CDK12Q9NYV4 1490 aaPredicted RBP16.03■□□□□ 0.16
PVT1-208ENST00000519481 IFT172Q9UG01 1749 aa16.02■□□□□ 0.16
PVT1-208ENST00000519481 RBM6P78332 1123 aaKnown RBP16.02■□□□□ 0.16
PVT1-208ENST00000519481 YTHDC2Q9H6S0 1430 aaKnown RBP16.02■□□□□ 0.15
PVT1-208ENST00000519481 DHX57Q6P158 1386 aaKnown RBP16.01■□□□□ 0.15
PVT1-208ENST00000519481 RAB3GAP2Q9H2M9 1393 aa16.01■□□□□ 0.15
PVT1-208ENST00000519481 NUTM2FA1L443 756 aa16.01■□□□□ 0.15
PVT1-208ENST00000519481 FOXO3O43524 673 aa16.01■□□□□ 0.15
PVT1-208ENST00000519481 SIRT1Q96EB6 747 aa16.01■□□□□ 0.15
PVT1-208ENST00000519481 C14orf93Q9H972 538 aaKnown RBP16.01■□□□□ 0.15
PVT1-208ENST00000519481 UPF1Q92900 1129 aaKnown RBP eCLIP16■□□□□ 0.15
PVT1-208ENST00000519481 KNDC1Q76NI1 1749 aa15.99■□□□□ 0.15
PVT1-208ENST00000519481 PLEKHH1Q9ULM0 1364 aa15.99■□□□□ 0.15
PVT1-208ENST00000519481 CFAP70Q5T0N1 1121 aa15.98■□□□□ 0.15
PVT1-208ENST00000519481 USP21Q9UK80 565 aa15.98■□□□□ 0.15
PVT1-208ENST00000519481 MYOM2P54296 1465 aa15.97■□□□□ 0.15
PVT1-208ENST00000519481 ADRA2BP18089 450 aa15.97■□□□□ 0.15
PVT1-208ENST00000519481 XPCQ01831 940 aaPredicted RBP15.97■□□□□ 0.15
PVT1-208ENST00000519481 TRPC5Q9UL62 973 aaPredicted RBP15.97■□□□□ 0.15
PVT1-208ENST00000519481 POGKQ9P215 609 aa15.96■□□□□ 0.15
PVT1-208ENST00000519481 FNBP4Q8N3X1 1017 aaPredicted RBP15.95■□□□□ 0.14
PVT1-208ENST00000519481 PXDNQ92626 1479 aa15.95■□□□□ 0.14
PVT1-208ENST00000519481 NRXN1Q9ULB1 1477 aa15.95■□□□□ 0.14
PVT1-208ENST00000519481 COL22A1Q8NFW1 1626 aaPredicted RBP15.94■□□□□ 0.14
PVT1-208ENST00000519481 PRAM1Q96QH2 718 aa15.94■□□□□ 0.14
PVT1-208ENST00000519481 PSME1Q06323 249 aa15.93■□□□□ 0.14
PVT1-208ENST00000519481 SAFB2Q14151 953 aaKnown RBP eCLIP15.93■□□□□ 0.14
PVT1-208ENST00000519481 KRT28Q7Z3Y7 464 aa15.93■□□□□ 0.14
PVT1-208ENST00000519481 STAC3Q96MF2 364 aa15.93■□□□□ 0.14
PVT1-208ENST00000519481 PHF8Q9UPP1 1060 aa15.93■□□□□ 0.14
PVT1-208ENST00000519481 RGS12O14924 1447 aa15.93■□□□□ 0.14
PVT1-208ENST00000519481 FMN2Q9NZ56 1722 aa15.92■□□□□ 0.14
PVT1-208ENST00000519481 HRCP23327 699 aa15.92■□□□□ 0.14
PVT1-208ENST00000519481 KIF1AQ12756 1690 aa15.92■□□□□ 0.14
PVT1-208ENST00000519481 HAP1P54257 671 aaPredicted RBP15.91■□□□□ 0.14
PVT1-208ENST00000519481 DCAF11Q8TEB1 546 aa15.91■□□□□ 0.14
PVT1-208ENST00000519481 KDM2AQ9Y2K7 1162 aa15.91■□□□□ 0.14
PVT1-208ENST00000519481 SPATA31A3Q5VYP0 1347 aa15.91■□□□□ 0.14
PVT1-208ENST00000519481 TRAK1Q9UPV9 953 aa15.89■□□□□ 0.13
PVT1-208ENST00000519481 DLC1Q96QB1 1528 aa15.89■□□□□ 0.13
PVT1-208ENST00000519481 ATAD2Q6PL18 1390 aa15.88■□□□□ 0.13
PVT1-208ENST00000519481 ATRNO75882 1429 aa15.88■□□□□ 0.13
PVT1-208ENST00000519481 LMOD2Q6P5Q4 547 aa15.88■□□□□ 0.13
PVT1-208ENST00000519481 EIF3AQ14152 1382 aaKnown RBP15.87■□□□□ 0.13
PVT1-208ENST00000519481 TNS3Q68CZ2 1445 aa15.86■□□□□ 0.13
PVT1-208ENST00000519481 ANKARQ7Z5J8 1434 aa15.86■□□□□ 0.13
PVT1-208ENST00000519481 UNC5CLQ8IV45 518 aa15.85■□□□□ 0.13
PVT1-208ENST00000519481 GJD4Q96KN9 370 aaPredicted RBP15.85■□□□□ 0.13
PVT1-208ENST00000519481 SBNO1A3KN83 1393 aa15.85■□□□□ 0.13
PVT1-208ENST00000519481 ARHGEF10O15013 1369 aa15.85■□□□□ 0.13
PVT1-208ENST00000519481 BCL9LQ86UU0 1499 aa15.84■□□□□ 0.13
PVT1-208ENST00000519481 PMFBP1Q8TBY8 1022 aa15.84■□□□□ 0.13
PVT1-208ENST00000519481 HIRIP3Q9BW71 556 aaPredicted RBP15.84■□□□□ 0.13
PVT1-208ENST00000519481 MARF1Q9Y4F3 1742 aaKnown RBP15.84■□□□□ 0.13
PVT1-208ENST00000519481 MINK1Q8N4C8 1332 aaPredicted RBP15.84■□□□□ 0.13
PVT1-208ENST00000519481 PLEKHG5O94827 1062 aa15.83■□□□□ 0.12
PVT1-208ENST00000519481 GPRASP1Q5JY77 1395 aa15.83■□□□□ 0.12
PVT1-208ENST00000519481 ADGRB1O14514 1584 aa15.83■□□□□ 0.12
PVT1-208ENST00000519481 RGPD8O14715 1765 aaPredicted RBP15.82■□□□□ 0.12
PVT1-208ENST00000519481 WASLO00401 505 aaPredicted RBP15.81■□□□□ 0.12
PVT1-208ENST00000519481 ADGRB2O60241 1585 aa15.81■□□□□ 0.12
PVT1-208ENST00000519481 CABLES1Q8TDN4 633 aa15.81■□□□□ 0.12
PVT1-208ENST00000519481 SLIT2O94813 1529 aa15.8■□□□□ 0.12
PVT1-208ENST00000519481 NGDNQ8NEJ9 315 aaKnown RBP15.8■□□□□ 0.12
PVT1-208ENST00000519481 USP32Q8NFA0 1604 aa15.79■□□□□ 0.12
PVT1-208ENST00000519481 CCDC125Q86Z20 511 aa15.79■□□□□ 0.12
PVT1-208ENST00000519481 CCDC9Q9Y3X0 531 aaKnown RBP15.79■□□□□ 0.12
PVT1-208ENST00000519481 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.78■□□□□ 0.12
PVT1-208ENST00000519481 TULP4Q9NRJ4 1543 aa15.78■□□□□ 0.12
PVT1-208ENST00000519481 RALGAPBQ86X10 1494 aa15.78■□□□□ 0.12
PVT1-208ENST00000519481 VPS72Q15906 364 aa15.77■□□□□ 0.12
PVT1-208ENST00000519481 PAK3O75914 559 aaPredicted RBP15.76■□□□□ 0.11
PVT1-208ENST00000519481 PIAS4Q8N2W9 510 aaPredicted RBP15.76■□□□□ 0.11
PVT1-208ENST00000519481 PRR36Q9H6K5 1346 aa15.75■□□□□ 0.11
PVT1-208ENST00000519481 FAM83GA6ND36 823 aa15.73■□□□□ 0.11
PVT1-208ENST00000519481 SEPT12Q8IYM1 358 aa15.73■□□□□ 0.11
PVT1-208ENST00000519481 NUDT16Q96DE0 195 aaKnown RBP15.73■□□□□ 0.11
PVT1-208ENST00000519481 NWD2Q9ULI1 1742 aa15.72■□□□□ 0.11
PVT1-208ENST00000519481 GLI3P10071 1580 aa15.72■□□□□ 0.11
PVT1-208ENST00000519481 A0A0G2JS52 829 aa15.72■□□□□ 0.11
PVT1-208ENST00000519481 MYT1Q01538 1121 aa15.72■□□□□ 0.11
PVT1-208ENST00000519481 SF3B2Q13435 895 aaKnown RBP15.72■□□□□ 0.11
PVT1-208ENST00000519481 CDK19Q9BWU1 502 aa15.72■□□□□ 0.11
PVT1-208ENST00000519481 ZRANB1Q9UGI0 708 aa15.72■□□□□ 0.11
PVT1-208ENST00000519481 BTG4Q9NY30 223 aa15.71■□□□□ 0.11
PVT1-208ENST00000519481 ARHGEF28Q8N1W1 1705 aaKnown RBP15.71■□□□□ 0.1
PVT1-208ENST00000519481 ABCA3Q99758 1704 aa15.7■□□□□ 0.1
PVT1-208ENST00000519481 TRPM3Q9HCF6 1732 aaPredicted RBP15.7■□□□□ 0.1
PVT1-208ENST00000519481 PLCH1Q4KWH8 1693 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms