RNA–Protein interactions for RNA: ENST00000519382.1

TRAPPC2-207, Transcript of trafficking protein particle complex 2, humanhuman

TSL 2

Gene TRAPPC2, Length 1,411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-207ENST00000519382 DCAF1Q9Y4B6 1507 aa11.09□□□□□ -0.63
TRAPPC2-207ENST00000519382 TBC1D2Q9BYX2 928 aa11.09□□□□□ -0.63
TRAPPC2-207ENST00000519382 Q3C1V9 767 aa11.08□□□□□ -0.64
TRAPPC2-207ENST00000519382 MSS51Q4VC12 460 aa11.08□□□□□ -0.64
TRAPPC2-207ENST00000519382 LIAT1Q6ZQX7 453 aa11.08□□□□□ -0.64
TRAPPC2-207ENST00000519382 GPBP1L1Q9HC44 474 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC2-207ENST00000519382 FDX1P10109 184 aa11.07□□□□□ -0.64
TRAPPC2-207ENST00000519382 V9GY48 417 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC2-207ENST00000519382 USB1Q9BQ65 265 aaKnown RBP11.06□□□□□ -0.64
TRAPPC2-207ENST00000519382 MYO15BQ96JP2 1530 aa11.06□□□□□ -0.64
TRAPPC2-207ENST00000519382 FCF1Q9Y324 198 aaKnown RBP11.05□□□□□ -0.64
TRAPPC2-207ENST00000519382 SLC19A1P41440 591 aa11.04□□□□□ -0.64
TRAPPC2-207ENST00000519382 NACADO15069 1562 aa11.03□□□□□ -0.64
TRAPPC2-207ENST00000519382 MMP16P51512 607 aa11.02□□□□□ -0.64
TRAPPC2-207ENST00000519382 RSBN1LQ6PCB5 846 aaPredicted RBP11.02□□□□□ -0.64
TRAPPC2-207ENST00000519382 IRX2Q9BZI1 471 aaPredicted RBP11.02□□□□□ -0.64
TRAPPC2-207ENST00000519382 PCDHB15Q9Y5E8 787 aa11.02□□□□□ -0.64
TRAPPC2-207ENST00000519382 KDM4CQ9H3R0 1056 aa11.01□□□□□ -0.65
TRAPPC2-207ENST00000519382 DXOO77932 396 aaKnown RBP11.01□□□□□ -0.65
TRAPPC2-207ENST00000519382 TPRNQ4KMQ1 711 aa11.01□□□□□ -0.65
TRAPPC2-207ENST00000519382 SPRYD7Q5W111 196 aa11.01□□□□□ -0.65
TRAPPC2-207ENST00000519382 C6orf229H3BNL8 230 aa11□□□□□ -0.65
TRAPPC2-207ENST00000519382 SPTLC1O15269 473 aa11□□□□□ -0.65
TRAPPC2-207ENST00000519382 MYSM1Q5VVJ2 828 aa11□□□□□ -0.65
TRAPPC2-207ENST00000519382 RETREG3Q86VR2 466 aa10.99□□□□□ -0.65
TRAPPC2-207ENST00000519382 LIMD1Q9UGP4 676 aa10.99□□□□□ -0.65
TRAPPC2-207ENST00000519382 RB1CC1Q8TDY2 1594 aa10.98□□□□□ -0.65
TRAPPC2-207ENST00000519382 TRIM67Q6ZTA4 783 aa10.98□□□□□ -0.65
TRAPPC2-207ENST00000519382 RIC3Q7Z5B4 369 aa10.98□□□□□ -0.65
TRAPPC2-207ENST00000519382 FAM117AQ9C073 453 aa10.98□□□□□ -0.65
TRAPPC2-207ENST00000519382 JUNDP17535 347 aa10.96□□□□□ -0.65
TRAPPC2-207ENST00000519382 DIXDC1Q155Q3 683 aa10.96□□□□□ -0.65
TRAPPC2-207ENST00000519382 GJA5P36382 358 aa10.95□□□□□ -0.66
TRAPPC2-207ENST00000519382 CABLES1Q8TDN4 633 aa10.95□□□□□ -0.66
TRAPPC2-207ENST00000519382 PLEKHG3A1L390 1219 aa10.94□□□□□ -0.66
TRAPPC2-207ENST00000519382 GFRA3O60609 400 aa10.94□□□□□ -0.66
TRAPPC2-207ENST00000519382 MTMR2Q13614 643 aa10.94□□□□□ -0.66
TRAPPC2-207ENST00000519382 CSPP1Q1MSJ5 1256 aa10.94□□□□□ -0.66
TRAPPC2-207ENST00000519382 ZNF598Q86UK7 904 aaKnown RBP10.94□□□□□ -0.66
TRAPPC2-207ENST00000519382 QPCTQ16769 361 aa10.93□□□□□ -0.66
TRAPPC2-207ENST00000519382 ZNF697Q5TEC3 545 aa10.93□□□□□ -0.66
TRAPPC2-207ENST00000519382 PRR7Q8TB68 274 aa10.93□□□□□ -0.66
TRAPPC2-207ENST00000519382 HRCP23327 699 aa10.92□□□□□ -0.66
TRAPPC2-207ENST00000519382 CFAP99D6REC4 459 aa10.92□□□□□ -0.66
TRAPPC2-207ENST00000519382 RPIAP49247 311 aa10.92□□□□□ -0.66
TRAPPC2-207ENST00000519382 POLR3EQ9NVU0 708 aa10.92□□□□□ -0.66
TRAPPC2-207ENST00000519382 FBXO31Q5XUX0 539 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC2-207ENST00000519382 PTCRAQ6ISU1 281 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC2-207ENST00000519382 CCDC24Q8N4L8 307 aa10.91□□□□□ -0.66
TRAPPC2-207ENST00000519382 PDZRN3Q9UPQ7 1066 aa10.91□□□□□ -0.66
TRAPPC2-207ENST00000519382 GDF9O60383 454 aa10.9□□□□□ -0.66
TRAPPC2-207ENST00000519382 PKD2L1Q9P0L9 805 aa10.9□□□□□ -0.66
TRAPPC2-207ENST00000519382 LCE2BO14633 110 aa10.89□□□□□ -0.67
TRAPPC2-207ENST00000519382 PRKCSHP14314 528 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC2-207ENST00000519382 CLK2P49760 499 aaKnown RBP10.89□□□□□ -0.67
TRAPPC2-207ENST00000519382 TNFRSF10AO00220 468 aa10.88□□□□□ -0.67
TRAPPC2-207ENST00000519382 BRPF1P55201 1214 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC2-207ENST00000519382 NUDT12Q9BQG2 462 aa10.88□□□□□ -0.67
TRAPPC2-207ENST00000519382 ZBTB3Q9H5J0 574 aa10.88□□□□□ -0.67
TRAPPC2-207ENST00000519382 SPDYE5A6NIY4 337 aa10.87□□□□□ -0.67
TRAPPC2-207ENST00000519382 LILRB3O75022 631 aa10.87□□□□□ -0.67
TRAPPC2-207ENST00000519382 NEUROD2Q15784 382 aa10.87□□□□□ -0.67
TRAPPC2-207ENST00000519382 TUSC1Q2TAM9 212 aa10.87□□□□□ -0.67
TRAPPC2-207ENST00000519382 RTL5Q5HYW3 569 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC2-207ENST00000519382 PRPF38BQ5VTL8 546 aaKnown RBP10.87□□□□□ -0.67
TRAPPC2-207ENST00000519382 NRG2O14511 850 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC2-207ENST00000519382 TRIM32Q13049 653 aa10.86□□□□□ -0.67
TRAPPC2-207ENST00000519382 PROCA1Q8NCQ7 364 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC2-207ENST00000519382 FOXC1Q12948 553 aa10.85□□□□□ -0.67
TRAPPC2-207ENST00000519382 DDRGK1Q96HY6 314 aa10.85□□□□□ -0.67
TRAPPC2-207ENST00000519382 RSPH6AQ9H0K4 717 aa10.85□□□□□ -0.67
TRAPPC2-207ENST00000519382 ZBTB24O43167 697 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC2-207ENST00000519382 CD2BP2O95400 341 aaKnown RBP10.84□□□□□ -0.67
TRAPPC2-207ENST00000519382 SH3D19Q5HYK7 790 aa10.84□□□□□ -0.67
TRAPPC2-207ENST00000519382 DESI1Q6ICB0 168 aa10.84□□□□□ -0.67
TRAPPC2-207ENST00000519382 CCNYL3P0C7X3 344 aa10.84□□□□□ -0.67
TRAPPC2-207ENST00000519382 PRR20EP86478 221 aa10.84□□□□□ -0.67
TRAPPC2-207ENST00000519382 PRR20CP86479 221 aa10.84□□□□□ -0.67
TRAPPC2-207ENST00000519382 PRR20DP86480 221 aa10.84□□□□□ -0.67
TRAPPC2-207ENST00000519382 PRR20BP86481 221 aa10.84□□□□□ -0.67
TRAPPC2-207ENST00000519382 PRR20AP86496 221 aa10.84□□□□□ -0.67
TRAPPC2-207ENST00000519382 LAPTM4AQ15012 233 aa10.84□□□□□ -0.67
TRAPPC2-207ENST00000519382 PTPRNQ16849 979 aa10.84□□□□□ -0.67
TRAPPC2-207ENST00000519382 Q6ZNB5 142 aa10.84□□□□□ -0.67
TRAPPC2-207ENST00000519382 PER1O15534 1290 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC2-207ENST00000519382 SKOR1P84550 965 aa10.83□□□□□ -0.68
TRAPPC2-207ENST00000519382 SKIV2LQ15477 1246 aaKnown RBP10.83□□□□□ -0.68
TRAPPC2-207ENST00000519382 NUTM2BA6NNL0 878 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC2-207ENST00000519382 NUTM2EB1AL46 878 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC2-207ENST00000519382 NUTM2DQ5VT03 806 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC2-207ENST00000519382 LYPD8Q6UX82 237 aa10.82□□□□□ -0.68
TRAPPC2-207ENST00000519382 NUTM2AQ8IVF1 878 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC2-207ENST00000519382 EVA1BQ9NVM1 165 aa10.82□□□□□ -0.68
TRAPPC2-207ENST00000519382 IL27Q8NEV9 243 aa10.81□□□□□ -0.68
TRAPPC2-207ENST00000519382 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRAPPC2-207ENST00000519382 KCNH2Q12809 1159 aa10.79□□□□□ -0.68
TRAPPC2-207ENST00000519382 TSC1Q92574 1164 aa10.78□□□□□ -0.68
TRAPPC2-207ENST00000519382 UNC93B1Q9H1C4 597 aa10.78□□□□□ -0.68
TRAPPC2-207ENST00000519382 MAP10Q9P2G4 905 aa10.78□□□□□ -0.68
TRAPPC2-207ENST00000519382 F12P00748 615 aaPredicted RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms