RNA–Protein interactions for RNA: ENST00000519305.6

NPIPB3-204, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 5

Gene NPIPB3, Length 848 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-204	ENST00000519305	KCNA6	P17658	529 aa		13.9	□□□□□ -0.18
NPIPB3-204	ENST00000519305	DISP3	Q9P2K9	1392 aa		13.9	□□□□□ -0.18
NPIPB3-204	ENST00000519305	CPS1	P31327	1500 aa		13.9	□□□□□ -0.19
NPIPB3-204	ENST00000519305	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.9	□□□□□ -0.19
NPIPB3-204	ENST00000519305	QRICH2	Q9H0J4	1663 aa		13.89	□□□□□ -0.19
NPIPB3-204	ENST00000519305	PUS7	Q96PZ0	661 aa	Known RBP	13.89	□□□□□ -0.19
NPIPB3-204	ENST00000519305	DMRT2	Q9Y5R5	561 aa		13.89	□□□□□ -0.19
NPIPB3-204	ENST00000519305	ROBO2	Q9HCK4	1378 aa		13.88	□□□□□ -0.19
NPIPB3-204	ENST00000519305	PTCH1	Q13635	1447 aa		13.88	□□□□□ -0.19
NPIPB3-204	ENST00000519305	PLEKHH1	Q9ULM0	1364 aa		13.87	□□□□□ -0.19
NPIPB3-204	ENST00000519305	XRN1	Q8IZH2	1706 aa	Known RBP	13.85	□□□□□ -0.19
NPIPB3-204	ENST00000519305	SRPK2	P78362	688 aa	Known RBP	13.85	□□□□□ -0.19
NPIPB3-204	ENST00000519305	CHD2	O14647	1828 aa	Known RBP	13.85	□□□□□ -0.19
NPIPB3-204	ENST00000519305	CDK19	Q9BWU1	502 aa		13.84	□□□□□ -0.19
NPIPB3-204	ENST00000519305	STRC	Q7RTU9	1775 aa		13.83	□□□□□ -0.19
NPIPB3-204	ENST00000519305	WASL	O00401	505 aa	Predicted RBP	13.83	□□□□□ -0.2
NPIPB3-204	ENST00000519305	PROSER2	Q86WR7	435 aa	Predicted RBP	13.83	□□□□□ -0.2
NPIPB3-204	ENST00000519305	CABP2	Q9NPB3	220 aa		13.83	□□□□□ -0.2
NPIPB3-204	ENST00000519305	ATAD2	Q6PL18	1390 aa		13.83	□□□□□ -0.2
NPIPB3-204	ENST00000519305	TULP4	Q9NRJ4	1543 aa		13.81	□□□□□ -0.2
NPIPB3-204	ENST00000519305	NWD1	Q149M9	1564 aa		13.81	□□□□□ -0.2
NPIPB3-204	ENST00000519305	TMC1	Q8TDI8	760 aa		13.81	□□□□□ -0.2
NPIPB3-204	ENST00000519305	C14orf37	Q86TY3	774 aa		13.8	□□□□□ -0.2
NPIPB3-204	ENST00000519305	NKTR	P30414	1462 aa	Known RBP	13.8	□□□□□ -0.2
NPIPB3-204	ENST00000519305	PANK3	Q9H999	370 aa		13.79	□□□□□ -0.2
NPIPB3-204	ENST00000519305	NINL	Q9Y2I6	1382 aa		13.79	□□□□□ -0.2
NPIPB3-204	ENST00000519305	ANP32C	O43423	234 aa		13.78	□□□□□ -0.2
NPIPB3-204	ENST00000519305	ADGRB2	O60241	1585 aa		13.78	□□□□□ -0.2
NPIPB3-204	ENST00000519305	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.78	□□□□□ -0.2
NPIPB3-204	ENST00000519305	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.77	□□□□□ -0.21
NPIPB3-204	ENST00000519305	SLC12A5	Q9H2X9	1139 aa		13.77	□□□□□ -0.21
NPIPB3-204	ENST00000519305	NCOA3	Q9Y6Q9	1424 aa		13.76	□□□□□ -0.21
NPIPB3-204	ENST00000519305	NUDT16	Q96DE0	195 aa	Known RBP	13.76	□□□□□ -0.21
NPIPB3-204	ENST00000519305	RBM33	Q96EV2	1170 aa	Known RBP	13.76	□□□□□ -0.21
NPIPB3-204	ENST00000519305	CCDC61	Q9Y6R9	512 aa		13.76	□□□□□ -0.21
NPIPB3-204	ENST00000519305	ADGRL3	Q9HAR2	1447 aa		13.75	□□□□□ -0.21
NPIPB3-204	ENST00000519305	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.75	□□□□□ -0.21
NPIPB3-204	ENST00000519305	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.75	□□□□□ -0.21
NPIPB3-204	ENST00000519305	TERF2IP	Q9NYB0	399 aa		13.75	□□□□□ -0.21
NPIPB3-204	ENST00000519305	KNSTRN	Q9Y448	316 aa		13.75	□□□□□ -0.21
NPIPB3-204	ENST00000519305	C19orf44	Q9H6X5	657 aa		13.74	□□□□□ -0.21
NPIPB3-204	ENST00000519305	CABP1	Q9NZU7	370 aa		13.74	□□□□□ -0.21
NPIPB3-204	ENST00000519305	TMEM94	Q12767	1356 aa		13.73	□□□□□ -0.21
NPIPB3-204	ENST00000519305	NUTM2F	A1L443	756 aa		13.73	□□□□□ -0.21
NPIPB3-204	ENST00000519305	ANKAR	Q7Z5J8	1434 aa		13.73	□□□□□ -0.21
NPIPB3-204	ENST00000519305	ANKRD36B	Q8N2N9	1353 aa		13.72	□□□□□ -0.21
NPIPB3-204	ENST00000519305	PER1	O15534	1290 aa	Predicted RBP	13.72	□□□□□ -0.21
NPIPB3-204	ENST00000519305	MIER1	Q8N108	512 aa		13.72	□□□□□ -0.21
NPIPB3-204	ENST00000519305	MYOM1	P52179	1685 aa		13.72	□□□□□ -0.21
NPIPB3-204	ENST00000519305	PPIP5K1	Q6PFW1	1433 aa		13.72	□□□□□ -0.21
NPIPB3-204	ENST00000519305	CDC42BPG	Q6DT37	1551 aa		13.71	□□□□□ -0.21
NPIPB3-204	ENST00000519305	PRR36	Q9H6K5	1346 aa		13.71	□□□□□ -0.21
NPIPB3-204	ENST00000519305	SCAF1	Q9H7N4	1312 aa	Known RBP	13.71	□□□□□ -0.21
NPIPB3-204	ENST00000519305	ATF3	P18847	181 aa		13.71	□□□□□ -0.21
NPIPB3-204	ENST00000519305	ATP7B	P35670	1465 aa		13.7	□□□□□ -0.22
NPIPB3-204	ENST00000519305	PLEKHG3	A1L390	1219 aa		13.7	□□□□□ -0.22
NPIPB3-204	ENST00000519305	ZNF692	Q9BU19	519 aa	Predicted RBP	13.7	□□□□□ -0.22
NPIPB3-204	ENST00000519305	STRCP1	A6NGW2	1772 aa		13.7	□□□□□ -0.22
NPIPB3-204	ENST00000519305	NALCN	Q8IZF0	1738 aa		13.7	□□□□□ -0.22
NPIPB3-204	ENST00000519305	MSH6	P52701	1360 aa		13.7	□□□□□ -0.22
NPIPB3-204	ENST00000519305	CADPS2	Q86UW7	1296 aa		13.69	□□□□□ -0.22
NPIPB3-204	ENST00000519305	CARD14	Q9BXL6	1004 aa		13.69	□□□□□ -0.22
NPIPB3-204	ENST00000519305	KTN1	Q86UP2	1357 aa	Known RBP	13.69	□□□□□ -0.22
NPIPB3-204	ENST00000519305	LRRC7	Q96NW7	1537 aa		13.69	□□□□□ -0.22
NPIPB3-204	ENST00000519305	DCC	P43146	1447 aa		13.68	□□□□□ -0.22
NPIPB3-204	ENST00000519305	CNGB1	Q14028	1251 aa	Predicted RBP	13.68	□□□□□ -0.22
NPIPB3-204	ENST00000519305		A0A1W2PP64	1363 aa		13.68	□□□□□ -0.22
NPIPB3-204	ENST00000519305	FMN2	Q9NZ56	1722 aa		13.67	□□□□□ -0.22
NPIPB3-204	ENST00000519305	CGNL1	Q0VF96	1302 aa		13.67	□□□□□ -0.22
NPIPB3-204	ENST00000519305	NSD3	Q9BZ95	1437 aa		13.67	□□□□□ -0.22
NPIPB3-204	ENST00000519305	RALBP1	Q15311	655 aa		13.67	□□□□□ -0.22
NPIPB3-204	ENST00000519305	NGDN	Q8NEJ9	315 aa	Known RBP	13.67	□□□□□ -0.22
NPIPB3-204	ENST00000519305	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.67	□□□□□ -0.22
NPIPB3-204	ENST00000519305	NPC1L1	Q9UHC9	1359 aa		13.67	□□□□□ -0.22
NPIPB3-204	ENST00000519305	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.66	□□□□□ -0.22
NPIPB3-204	ENST00000519305	CC2D1B	Q5T0F9	858 aa	Known RBP	13.66	□□□□□ -0.22
NPIPB3-204	ENST00000519305	PMFBP1	Q8TBY8	1022 aa		13.66	□□□□□ -0.22
NPIPB3-204	ENST00000519305	ACE	P12821	1306 aa		13.65	□□□□□ -0.22
NPIPB3-204	ENST00000519305	CPSF1	Q10570	1443 aa	Known RBP	13.65	□□□□□ -0.22
NPIPB3-204	ENST00000519305	ESCO1	Q5FWF5	840 aa		13.65	□□□□□ -0.22
NPIPB3-204	ENST00000519305	PHF8	Q9UPP1	1060 aa		13.65	□□□□□ -0.22
NPIPB3-204	ENST00000519305	CD163L1	Q9NR16	1453 aa		13.65	□□□□□ -0.22
NPIPB3-204	ENST00000519305	ITSN1	Q15811	1721 aa		13.64	□□□□□ -0.23
NPIPB3-204	ENST00000519305	USP32	Q8NFA0	1604 aa		13.64	□□□□□ -0.23
NPIPB3-204	ENST00000519305	TOPAZ1	Q8N9V7	1692 aa		13.63	□□□□□ -0.23
NPIPB3-204	ENST00000519305	CCER2	I3L3R5	266 aa		13.63	□□□□□ -0.23
NPIPB3-204	ENST00000519305	EDC4	Q6P2E9	1401 aa	Known RBP	13.63	□□□□□ -0.23
NPIPB3-204	ENST00000519305	C1orf167	Q5SNV9	1468 aa		13.62	□□□□□ -0.23
NPIPB3-204	ENST00000519305	POLR3A	O14802	1390 aa	Predicted RBP	13.62	□□□□□ -0.23
NPIPB3-204	ENST00000519305	NSD2	O96028	1365 aa		13.62	□□□□□ -0.23
NPIPB3-204	ENST00000519305	MORC1	Q86VD1	984 aa		13.61	□□□□□ -0.23
NPIPB3-204	ENST00000519305	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
NPIPB3-204	ENST00000519305	ORAI2	Q96SN7	254 aa		13.61	□□□□□ -0.23
NPIPB3-204	ENST00000519305	MST1R	Q04912	1400 aa		13.61	□□□□□ -0.23
NPIPB3-204	ENST00000519305	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.61	□□□□□ -0.23
NPIPB3-204	ENST00000519305	PARD3	Q8TEW0	1356 aa		13.6	□□□□□ -0.23
NPIPB3-204	ENST00000519305	USP6	P35125	1406 aa		13.6	□□□□□ -0.23
NPIPB3-204	ENST00000519305	PSME1	Q06323	249 aa		13.6	□□□□□ -0.23
NPIPB3-204	ENST00000519305	RGPD8	O14715	1765 aa	Predicted RBP	13.6	□□□□□ -0.23
NPIPB3-204	ENST00000519305	TTC21A	Q8NDW8	1320 aa		13.6	□□□□□ -0.23

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