RNA–Protein interactions for RNA: ENST00000519222.5

CSGALNACT1-207, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-207ENST00000519222 BLMP54132 1417 aaPredicted RBP23.92■■□□□ 1.42
CSGALNACT1-207ENST00000519222 SPATA31D1Q6ZQQ2 1576 aa23.92■■□□□ 1.42
CSGALNACT1-207ENST00000519222 ARHGEF28Q8N1W1 1705 aaKnown RBP23.9■■□□□ 1.42
CSGALNACT1-207ENST00000519222 TSHZ2Q9NRE2 1034 aa23.9■■□□□ 1.42
CSGALNACT1-207ENST00000519222 B4GALNT3Q6L9W6 998 aa23.89■■□□□ 1.42
CSGALNACT1-207ENST00000519222 ALKQ9UM73 1620 aa23.89■■□□□ 1.42
CSGALNACT1-207ENST00000519222 PTPRMP28827 1452 aa23.88■■□□□ 1.41
CSGALNACT1-207ENST00000519222 PPP4R2Q9NY27 417 aa23.88■■□□□ 1.41
CSGALNACT1-207ENST00000519222 CGNL1Q0VF96 1302 aa23.86■■□□□ 1.41
CSGALNACT1-207ENST00000519222 CDK19Q9BWU1 502 aa23.86■■□□□ 1.41
CSGALNACT1-207ENST00000519222 PDE3BQ13370 1112 aa23.85■■□□□ 1.41
CSGALNACT1-207ENST00000519222 ERICH6BQ5W0A0 696 aa23.84■■□□□ 1.41
CSGALNACT1-207ENST00000519222 PUS7Q96PZ0 661 aaKnown RBP23.84■■□□□ 1.41
CSGALNACT1-207ENST00000519222 TNRQ92752 1358 aa23.84■■□□□ 1.41
CSGALNACT1-207ENST00000519222 RCAN3Q9UKA8 241 aa23.84■■□□□ 1.41
CSGALNACT1-207ENST00000519222 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
CSGALNACT1-207ENST00000519222 ANKRD36BQ8N2N9 1353 aa23.83■■□□□ 1.41
CSGALNACT1-207ENST00000519222 PLEKHH1Q9ULM0 1364 aa23.83■■□□□ 1.41
CSGALNACT1-207ENST00000519222 TXNDC2Q86VQ3 553 aa23.82■■□□□ 1.4
CSGALNACT1-207ENST00000519222 A0A1W2PP64 1363 aa23.81■■□□□ 1.4
CSGALNACT1-207ENST00000519222 INSRP06213 1382 aa23.81■■□□□ 1.4
CSGALNACT1-207ENST00000519222 APAF1O14727 1248 aa23.81■■□□□ 1.4
CSGALNACT1-207ENST00000519222 METP08581 1390 aa23.81■■□□□ 1.4
CSGALNACT1-207ENST00000519222 MTHFSP49914 203 aa23.81■■□□□ 1.4
CSGALNACT1-207ENST00000519222 CABP1Q9NZU7 370 aa23.81■■□□□ 1.4
CSGALNACT1-207ENST00000519222 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.8■■□□□ 1.4
CSGALNACT1-207ENST00000519222 GGNBP2Q9H3C7 697 aa23.8■■□□□ 1.4
CSGALNACT1-207ENST00000519222 RRP1P56182 461 aaKnown RBP23.76■■□□□ 1.39
CSGALNACT1-207ENST00000519222 TERF2IPQ9NYB0 399 aa23.76■■□□□ 1.39
CSGALNACT1-207ENST00000519222 ATAD2Q6PL18 1390 aa23.75■■□□□ 1.39
CSGALNACT1-207ENST00000519222 HDGFP51858 240 aaKnown RBP23.75■■□□□ 1.39
CSGALNACT1-207ENST00000519222 LTKP29376 864 aa23.74■■□□□ 1.39
CSGALNACT1-207ENST00000519222 POLR3AO14802 1390 aaPredicted RBP23.74■■□□□ 1.39
CSGALNACT1-207ENST00000519222 PLIN1O60240 522 aa23.74■■□□□ 1.39
CSGALNACT1-207ENST00000519222 TMEM2Q9UHN6 1383 aa23.73■■□□□ 1.39
CSGALNACT1-207ENST00000519222 FYB1O15117 783 aa23.72■■□□□ 1.39
CSGALNACT1-207ENST00000519222 ABCC11Q96J66 1382 aa23.72■■□□□ 1.39
CSGALNACT1-207ENST00000519222 GOLGA2Q08379 1002 aa23.72■■□□□ 1.39
CSGALNACT1-207ENST00000519222 NEUROD2Q15784 382 aa23.72■■□□□ 1.39
CSGALNACT1-207ENST00000519222 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.71■■□□□ 1.39
CSGALNACT1-207ENST00000519222 SPINK5Q9NQ38 1064 aaPredicted RBP23.71■■□□□ 1.39
CSGALNACT1-207ENST00000519222 ZNF521Q96K83 1311 aa23.71■■□□□ 1.39
CSGALNACT1-207ENST00000519222 NCKAP5LQ9HCH0 1330 aa23.71■■□□□ 1.39
CSGALNACT1-207ENST00000519222 HDGFL2Q7Z4V5 671 aaPredicted RBP23.7■■□□□ 1.38
CSGALNACT1-207ENST00000519222 DUSP27Q5VZP5 1158 aa23.7■■□□□ 1.38
CSGALNACT1-207ENST00000519222 SLC26A8Q96RN1 970 aa23.7■■□□□ 1.38
CSGALNACT1-207ENST00000519222 RRP7AQ9Y3A4 280 aaKnown RBP23.69■■□□□ 1.38
CSGALNACT1-207ENST00000519222 CD163L1Q9NR16 1453 aa23.69■■□□□ 1.38
CSGALNACT1-207ENST00000519222 DMRT2Q9Y5R5 561 aa23.69■■□□□ 1.38
CSGALNACT1-207ENST00000519222 NINLQ9Y2I6 1382 aa23.68■■□□□ 1.38
CSGALNACT1-207ENST00000519222 EXOC6Q8TAG9 804 aa23.68■■□□□ 1.38
CSGALNACT1-207ENST00000519222 CCDC136Q96JN2 1154 aa23.68■■□□□ 1.38
CSGALNACT1-207ENST00000519222 FBLN1P23142 703 aa23.67■■□□□ 1.38
CSGALNACT1-207ENST00000519222 NRXN3Q9Y4C0 1643 aa23.67■■□□□ 1.38
CSGALNACT1-207ENST00000519222 WASLO00401 505 aaPredicted RBP23.66■■□□□ 1.38
CSGALNACT1-207ENST00000519222 CFAP53Q96M91 514 aa23.66■■□□□ 1.38
CSGALNACT1-207ENST00000519222 NSD2O96028 1365 aa23.65■■□□□ 1.38
CSGALNACT1-207ENST00000519222 SLFN5Q08AF3 891 aa23.64■■□□□ 1.38
CSGALNACT1-207ENST00000519222 NUTM2FA1L443 756 aa23.63■■□□□ 1.37
CSGALNACT1-207ENST00000519222 U2AF1L5P0DN76 240 aaPredicted RBP23.63■■□□□ 1.37
CSGALNACT1-207ENST00000519222 U2AF1Q01081 240 aaKnown RBP eCLIP23.63■■□□□ 1.37
CSGALNACT1-207ENST00000519222 SETD1AO15047 1707 aaKnown RBP23.63■■□□□ 1.37
CSGALNACT1-207ENST00000519222 DLC1Q96QB1 1528 aa23.62■■□□□ 1.37
CSGALNACT1-207ENST00000519222 TCP11L2Q8N4U5 519 aa23.62■■□□□ 1.37
CSGALNACT1-207ENST00000519222 NUDT16Q96DE0 195 aaKnown RBP23.61■■□□□ 1.37
CSGALNACT1-207ENST00000519222 USP32Q8NFA0 1604 aa23.61■■□□□ 1.37
CSGALNACT1-207ENST00000519222 U2SURPO15042 1029 aaKnown RBP23.6■■□□□ 1.37
CSGALNACT1-207ENST00000519222 EID1Q9Y6B2 187 aa23.6■■□□□ 1.37
CSGALNACT1-207ENST00000519222 ROBO2Q9HCK4 1378 aa23.6■■□□□ 1.37
CSGALNACT1-207ENST00000519222 WWC1Q8IX03 1113 aa23.6■■□□□ 1.37
CSGALNACT1-207ENST00000519222 RUNDC1Q96C34 613 aa23.6■■□□□ 1.37
CSGALNACT1-207ENST00000519222 PPM1GO15355 546 aaPredicted RBP23.59■■□□□ 1.37
CSGALNACT1-207ENST00000519222 UBR1Q8IWV7 1749 aa23.59■■□□□ 1.37
CSGALNACT1-207ENST00000519222 ADAMTS13Q76LX8 1427 aa23.59■■□□□ 1.37
CSGALNACT1-207ENST00000519222 C20orf194Q5TEA3 1177 aa23.58■■□□□ 1.37
CSGALNACT1-207ENST00000519222 RBM19Q9Y4C8 960 aaKnown RBP23.58■■□□□ 1.37
CSGALNACT1-207ENST00000519222 ZRANB1Q9UGI0 708 aa23.57■■□□□ 1.36
CSGALNACT1-207ENST00000519222 PPIP5K1Q6PFW1 1433 aa23.57■■□□□ 1.36
CSGALNACT1-207ENST00000519222 NLRP1Q9C000 1473 aa23.56■■□□□ 1.36
CSGALNACT1-207ENST00000519222 TRMT2AQ8IZ69 625 aaKnown RBP23.56■■□□□ 1.36
CSGALNACT1-207ENST00000519222 CCDC61Q9Y6R9 512 aa23.55■■□□□ 1.36
CSGALNACT1-207ENST00000519222 SHPRHQ149N8 1683 aa23.55■■□□□ 1.36
CSGALNACT1-207ENST00000519222 NME9Q86XW9 330 aa23.55■■□□□ 1.36
CSGALNACT1-207ENST00000519222 PLEKHG1Q9ULL1 1385 aa23.54■■□□□ 1.36
CSGALNACT1-207ENST00000519222 E9PSI1 815 aa23.54■■□□□ 1.36
CSGALNACT1-207ENST00000519222 PRR36Q9H6K5 1346 aa23.53■■□□□ 1.36
CSGALNACT1-207ENST00000519222 CRBNQ96SW2 442 aa23.53■■□□□ 1.36
CSGALNACT1-207ENST00000519222 FAM135BQ49AJ0 1406 aa23.53■■□□□ 1.36
CSGALNACT1-207ENST00000519222 SIRT1Q96EB6 747 aa23.52■■□□□ 1.36
CSGALNACT1-207ENST00000519222 THEMISQ8N1K5 641 aaPredicted RBP23.52■■□□□ 1.36
CSGALNACT1-207ENST00000519222 AMOTL2Q9Y2J4 779 aa23.52■■□□□ 1.36
CSGALNACT1-207ENST00000519222 TECPR2O15040 1411 aa23.51■■□□□ 1.35
CSGALNACT1-207ENST00000519222 C3P01024 1663 aa23.51■■□□□ 1.35
CSGALNACT1-207ENST00000519222 BCAR3O75815 825 aa23.5■■□□□ 1.35
CSGALNACT1-207ENST00000519222 PTPRUQ92729 1446 aa23.49■■□□□ 1.35
CSGALNACT1-207ENST00000519222 POLKQ9UBT6 870 aa23.49■■□□□ 1.35
CSGALNACT1-207ENST00000519222 ATP7BP35670 1465 aa23.48■■□□□ 1.35
CSGALNACT1-207ENST00000519222 DIAPH1O60610 1272 aaKnown RBP23.48■■□□□ 1.35
CSGALNACT1-207ENST00000519222 NGEFQ8N5V2 710 aa23.48■■□□□ 1.35
CSGALNACT1-207ENST00000519222 CPSF1Q10570 1443 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms