RNA–Protein interactions for RNA: ENST00000519106.1

CLDN23-201, Transcript of claudin 23, humanhuman

APPRIS P1 BASIC

Gene CLDN23, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23-201ENST00000519106 AMOTL2Q9Y2J4 779 aa28.65■■■□□ 2.18
CLDN23-201ENST00000519106 SIRT1Q96EB6 747 aa28.65■■■□□ 2.18
CLDN23-201ENST00000519106 MYOM1P52179 1685 aa28.65■■■□□ 2.18
CLDN23-201ENST00000519106 ROBO2Q9HCK4 1378 aa28.65■■■□□ 2.18
CLDN23-201ENST00000519106 NCKAP5LQ9HCH0 1330 aa28.64■■■□□ 2.18
CLDN23-201ENST00000519106 PRKRIP1Q9H875 184 aaPredicted RBP28.64■■■□□ 2.18
CLDN23-201ENST00000519106 CABP2Q9NPB3 220 aa28.64■■■□□ 2.18
CLDN23-201ENST00000519106 FAM135BQ49AJ0 1406 aa28.64■■■□□ 2.17
CLDN23-201ENST00000519106 CPS1P31327 1500 aa28.63■■■□□ 2.17
CLDN23-201ENST00000519106 PER1O15534 1290 aaPredicted RBP28.63■■■□□ 2.17
CLDN23-201ENST00000519106 SRPK2P78362 688 aaKnown RBP28.62■■■□□ 2.17
CLDN23-201ENST00000519106 TMC1Q8TDI8 760 aa28.61■■■□□ 2.17
CLDN23-201ENST00000519106 NPHP4O75161 1426 aaPredicted RBP28.6■■■□□ 2.17
CLDN23-201ENST00000519106 PUS7Q96PZ0 661 aaKnown RBP28.6■■■□□ 2.17
CLDN23-201ENST00000519106 CDK19Q9BWU1 502 aa28.59■■■□□ 2.17
CLDN23-201ENST00000519106 HSPA2P54652 639 aa28.58■■■□□ 2.17
CLDN23-201ENST00000519106 SLC12A5Q9H2X9 1139 aa28.58■■■□□ 2.17
CLDN23-201ENST00000519106 CCER2I3L3R5 266 aa28.57■■■□□ 2.16
CLDN23-201ENST00000519106 PIK3R4Q99570 1358 aa28.55■■■□□ 2.16
CLDN23-201ENST00000519106 KCNA6P17658 529 aa28.54■■■□□ 2.16
CLDN23-201ENST00000519106 KNSTRNQ9Y448 316 aa28.54■■■□□ 2.16
CLDN23-201ENST00000519106 WASLO00401 505 aaPredicted RBP28.51■■■□□ 2.16
CLDN23-201ENST00000519106 XRN1Q8IZH2 1706 aaKnown RBP28.51■■■□□ 2.15
CLDN23-201ENST00000519106 PTCH1Q13635 1447 aa28.51■■■□□ 2.15
CLDN23-201ENST00000519106 ATAD2Q6PL18 1390 aa28.5■■■□□ 2.15
CLDN23-201ENST00000519106 CC2D1BQ5T0F9 858 aaKnown RBP28.5■■■□□ 2.15
CLDN23-201ENST00000519106 YTHDC1Q96MU7 727 aaKnown RBP28.5■■■□□ 2.15
CLDN23-201ENST00000519106 CARD14Q9BXL6 1004 aa28.5■■■□□ 2.15
CLDN23-201ENST00000519106 LMTK3Q96Q04 1460 aa28.49■■■□□ 2.15
CLDN23-201ENST00000519106 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.49■■■□□ 2.15
CLDN23-201ENST00000519106 CHD2O14647 1828 aaKnown RBP28.48■■■□□ 2.15
CLDN23-201ENST00000519106 KTN1Q86UP2 1357 aaKnown RBP28.48■■■□□ 2.15
CLDN23-201ENST00000519106 AMER1Q5JTC6 1135 aaPredicted RBP28.44■■■□□ 2.14
CLDN23-201ENST00000519106 RALBP1Q15311 655 aa28.44■■■□□ 2.14
CLDN23-201ENST00000519106 CCDC184Q52MB2 194 aa28.43■■■□□ 2.14
CLDN23-201ENST00000519106 CABP1Q9NZU7 370 aa28.43■■■□□ 2.14
CLDN23-201ENST00000519106 NINLQ9Y2I6 1382 aa28.43■■■□□ 2.14
CLDN23-201ENST00000519106 ANKRD36BQ8N2N9 1353 aa28.41■■■□□ 2.14
CLDN23-201ENST00000519106 PARD3Q8TEW0 1356 aa28.4■■■□□ 2.14
CLDN23-201ENST00000519106 ADGRB2O60241 1585 aa28.4■■■□□ 2.14
CLDN23-201ENST00000519106 NSD3Q9BZ95 1437 aa28.4■■■□□ 2.14
CLDN23-201ENST00000519106 NUDT16Q96DE0 195 aaKnown RBP28.4■■■□□ 2.14
CLDN23-201ENST00000519106 RBM33Q96EV2 1170 aaKnown RBP28.39■■■□□ 2.14
CLDN23-201ENST00000519106 NUTM2FA1L443 756 aa28.38■■■□□ 2.13
CLDN23-201ENST00000519106 MRS2Q9HD23 443 aa28.37■■■□□ 2.13
CLDN23-201ENST00000519106 TERF2IPQ9NYB0 399 aa28.37■■■□□ 2.13
CLDN23-201ENST00000519106 A0A1W2PP64 1363 aa28.37■■■□□ 2.13
CLDN23-201ENST00000519106 MYBBP1AQ9BQG0 1328 aaKnown RBP28.36■■■□□ 2.13
CLDN23-201ENST00000519106 CCDC61Q9Y6R9 512 aa28.35■■■□□ 2.13
CLDN23-201ENST00000519106 PRR36Q9H6K5 1346 aa28.35■■■□□ 2.13
CLDN23-201ENST00000519106 CD163L1Q9NR16 1453 aa28.34■■■□□ 2.13
CLDN23-201ENST00000519106 PPIP5K1Q6PFW1 1433 aa28.34■■■□□ 2.13
CLDN23-201ENST00000519106 NPC1L1Q9UHC9 1359 aa28.34■■■□□ 2.13
CLDN23-201ENST00000519106 HDGFL2Q7Z4V5 671 aaPredicted RBP28.33■■■□□ 2.13
CLDN23-201ENST00000519106 ATP7BP35670 1465 aa28.32■■■□□ 2.12
CLDN23-201ENST00000519106 STRCQ7RTU9 1775 aa28.32■■■□□ 2.12
CLDN23-201ENST00000519106 CGNL1Q0VF96 1302 aa28.29■■■□□ 2.12
CLDN23-201ENST00000519106 NWD1Q149M9 1564 aa28.29■■■□□ 2.12
CLDN23-201ENST00000519106 PROSER2Q86WR7 435 aaPredicted RBP28.27■■■□□ 2.12
CLDN23-201ENST00000519106 NLRP13Q86W25 1043 aa28.27■■■□□ 2.12
CLDN23-201ENST00000519106 C14orf37Q86TY3 774 aa28.26■■■□□ 2.11
CLDN23-201ENST00000519106 NALCNQ8IZF0 1738 aa28.26■■■□□ 2.11
CLDN23-201ENST00000519106 USP32Q8NFA0 1604 aa28.24■■■□□ 2.11
CLDN23-201ENST00000519106 BRD4O60885 1362 aaPredicted RBP28.24■■■□□ 2.11
CLDN23-201ENST00000519106 FAM9BQ8IZU0 186 aa28.24■■■□□ 2.11
CLDN23-201ENST00000519106 CPSF1Q10570 1443 aaKnown RBP28.23■■■□□ 2.11
CLDN23-201ENST00000519106 PPP2R1AP30153 589 aa28.22■■■□□ 2.11
CLDN23-201ENST00000519106 ADGRL3Q9HAR2 1447 aa28.22■■■□□ 2.11
CLDN23-201ENST00000519106 MORC1Q86VD1 984 aa28.21■■■□□ 2.11
CLDN23-201ENST00000519106 CDC42BPGQ6DT37 1551 aa28.21■■■□□ 2.11
CLDN23-201ENST00000519106 RGPD8O14715 1765 aaPredicted RBP28.21■■■□□ 2.11
CLDN23-201ENST00000519106 TOPAZ1Q8N9V7 1692 aa28.21■■■□□ 2.11
CLDN23-201ENST00000519106 NKTRP30414 1462 aaKnown RBP28.2■■■□□ 2.11
CLDN23-201ENST00000519106 STRCP1A6NGW2 1772 aa28.2■■■□□ 2.11
CLDN23-201ENST00000519106 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.2■■■□□ 2.11
CLDN23-201ENST00000519106 PLEKHG3A1L390 1219 aa28.2■■■□□ 2.1
CLDN23-201ENST00000519106 TNNT2P45379 298 aaPredicted RBP28.18■■■□□ 2.1
CLDN23-201ENST00000519106 PMFBP1Q8TBY8 1022 aa28.18■■■□□ 2.1
CLDN23-201ENST00000519106 ACEP12821 1306 aa28.18■■■□□ 2.1
CLDN23-201ENST00000519106 FMN2Q9NZ56 1722 aa28.18■■■□□ 2.1
CLDN23-201ENST00000519106 FYB1O15117 783 aa28.18■■■□□ 2.1
CLDN23-201ENST00000519106 GGNBP2Q9H3C7 697 aa28.18■■■□□ 2.1
CLDN23-201ENST00000519106 ZNF692Q9BU19 519 aaPredicted RBP28.17■■■□□ 2.1
CLDN23-201ENST00000519106 NSD2O96028 1365 aa28.17■■■□□ 2.1
CLDN23-201ENST00000519106 ANKARQ7Z5J8 1434 aa28.16■■■□□ 2.1
CLDN23-201ENST00000519106 ITSN1Q15811 1721 aa28.16■■■□□ 2.1
CLDN23-201ENST00000519106 PNISRQ8TF01 805 aaKnown RBP28.15■■■□□ 2.1
CLDN23-201ENST00000519106 AKAP12Q02952 1782 aa28.14■■■□□ 2.1
CLDN23-201ENST00000519106 EDC4Q6P2E9 1401 aaKnown RBP28.14■■■□□ 2.1
CLDN23-201ENST00000519106 TMEM94Q12767 1356 aa28.14■■■□□ 2.09
CLDN23-201ENST00000519106 NGDNQ8NEJ9 315 aaKnown RBP28.12■■■□□ 2.09
CLDN23-201ENST00000519106 MON2Q7Z3U7 1717 aa28.12■■■□□ 2.09
CLDN23-201ENST00000519106 C19orf44Q9H6X5 657 aa28.11■■■□□ 2.09
CLDN23-201ENST00000519106 ZNF335Q9H4Z2 1342 aaPredicted RBP28.1■■■□□ 2.09
CLDN23-201ENST00000519106 KIF20BQ96Q89 1820 aa28.09■■■□□ 2.09
CLDN23-201ENST00000519106 NME9Q86XW9 330 aa28.08■■■□□ 2.09
CLDN23-201ENST00000519106 DMRT2Q9Y5R5 561 aa28.07■■■□□ 2.08
CLDN23-201ENST00000519106 POLR3AO14802 1390 aaPredicted RBP28.07■■■□□ 2.08
CLDN23-201ENST00000519106 USP6P35125 1406 aa28.07■■■□□ 2.08
CLDN23-201ENST00000519106 ESCO1Q5FWF5 840 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms