RNA–Protein interactions for RNA: ENST00000518971.1

CHRAC1-202, Transcript of chromatin accessibility complex subunit 1, humanhuman

TSL 1 (best)

Gene CHRAC1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1-202ENST00000518971 CCDC144AA2RUR9 1427 aa12.1□□□□□ -0.47
CHRAC1-202ENST00000518971 RPGRIP1LQ68CZ1 1315 aa12.1□□□□□ -0.47
CHRAC1-202ENST00000518971 ABCB7O75027 752 aa12.09□□□□□ -0.47
CHRAC1-202ENST00000518971 NPM3O75607 178 aaKnown RBP12.09□□□□□ -0.47
CHRAC1-202ENST00000518971 WAPLQ7Z5K2 1190 aa12.09□□□□□ -0.47
CHRAC1-202ENST00000518971 DCCP43146 1447 aa12.09□□□□□ -0.47
CHRAC1-202ENST00000518971 SETD5Q9C0A6 1442 aa12.09□□□□□ -0.47
CHRAC1-202ENST00000518971 SHPRHQ149N8 1683 aa12.09□□□□□ -0.47
CHRAC1-202ENST00000518971 RAB3GAP2Q9H2M9 1393 aa12.08□□□□□ -0.48
CHRAC1-202ENST00000518971 NUTM2FA1L443 756 aa12.08□□□□□ -0.48
CHRAC1-202ENST00000518971 C1orf167Q5SNV9 1468 aa12.08□□□□□ -0.48
CHRAC1-202ENST00000518971 PLEKHH1Q9ULM0 1364 aa12.07□□□□□ -0.48
CHRAC1-202ENST00000518971 MEX3CQ5U5Q3 659 aaKnown RBP12.07□□□□□ -0.48
CHRAC1-202ENST00000518971 PTCH1Q13635 1447 aa12.06□□□□□ -0.48
CHRAC1-202ENST00000518971 SPATA31A6Q5VVP1 1343 aa12.06□□□□□ -0.48
CHRAC1-202ENST00000518971 XPCQ01831 940 aaPredicted RBP12.05□□□□□ -0.48
CHRAC1-202ENST00000518971 PNPLA6Q8IY17 1366 aa12.04□□□□□ -0.48
CHRAC1-202ENST00000518971 CFAP70Q5T0N1 1121 aa12.03□□□□□ -0.48
CHRAC1-202ENST00000518971 PIK3C2GO75747 1445 aa12.03□□□□□ -0.48
CHRAC1-202ENST00000518971 ADAMTS2O95450 1211 aa12.02□□□□□ -0.49
CHRAC1-202ENST00000518971 LRRC59Q96AG4 307 aaKnown RBP12.02□□□□□ -0.49
CHRAC1-202ENST00000518971 AFF2P51816 1311 aa12.02□□□□□ -0.49
CHRAC1-202ENST00000518971 ESCO1Q5FWF5 840 aa12.01□□□□□ -0.49
CHRAC1-202ENST00000518971 C8orf37Q96NL8 207 aa12.01□□□□□ -0.49
CHRAC1-202ENST00000518971 LRPPRCP42704 1394 aaKnown RBP12.01□□□□□ -0.49
CHRAC1-202ENST00000518971 ANKRD30BQ9BXX2 1392 aa12.01□□□□□ -0.49
CHRAC1-202ENST00000518971 PRAG1Q86YV5 1406 aa12.01□□□□□ -0.49
CHRAC1-202ENST00000518971 RGPD8O14715 1765 aaPredicted RBP12□□□□□ -0.49
CHRAC1-202ENST00000518971 SAFB2Q14151 953 aaKnown RBP eCLIP12□□□□□ -0.49
CHRAC1-202ENST00000518971 SOS2Q07890 1332 aaPredicted RBP12□□□□□ -0.49
CHRAC1-202ENST00000518971 YTHDC2Q9H6S0 1430 aaKnown RBP12□□□□□ -0.49
CHRAC1-202ENST00000518971 FOXO3O43524 673 aa11.99□□□□□ -0.49
CHRAC1-202ENST00000518971 C14orf93Q9H972 538 aaKnown RBP11.99□□□□□ -0.49
CHRAC1-202ENST00000518971 KDM2AQ9Y2K7 1162 aa11.99□□□□□ -0.49
CHRAC1-202ENST00000518971 LAMC1P11047 1609 aa11.99□□□□□ -0.49
CHRAC1-202ENST00000518971 KNDC1Q76NI1 1749 aa11.99□□□□□ -0.49
CHRAC1-202ENST00000518971 CDC42BPGQ6DT37 1551 aa11.98□□□□□ -0.49
CHRAC1-202ENST00000518971 TECPR2O15040 1411 aa11.98□□□□□ -0.49
CHRAC1-202ENST00000518971 ABCC11Q96J66 1382 aa11.98□□□□□ -0.49
CHRAC1-202ENST00000518971 PLEKHG5O94827 1062 aa11.98□□□□□ -0.49
CHRAC1-202ENST00000518971 ZNF772Q68DY9 489 aaPredicted RBP11.98□□□□□ -0.49
CHRAC1-202ENST00000518971 NRXN1Q9ULB1 1477 aa11.97□□□□□ -0.49
CHRAC1-202ENST00000518971 CHRDL2Q6WN34 429 aa11.97□□□□□ -0.49
CHRAC1-202ENST00000518971 FMN2Q9NZ56 1722 aa11.97□□□□□ -0.49
CHRAC1-202ENST00000518971 RXRBP28702 533 aa11.96□□□□□ -0.49
CHRAC1-202ENST00000518971 MYOM2P54296 1465 aa11.95□□□□□ -0.5
CHRAC1-202ENST00000518971 PXDNQ92626 1479 aa11.95□□□□□ -0.5
CHRAC1-202ENST00000518971 DCAF11Q8TEB1 546 aa11.95□□□□□ -0.5
CHRAC1-202ENST00000518971 NGLY1Q96IV0 654 aa11.95□□□□□ -0.5
CHRAC1-202ENST00000518971 PRAM1Q96QH2 718 aa11.95□□□□□ -0.5
CHRAC1-202ENST00000518971 QTRT2Q9H974 415 aaKnown RBP11.95□□□□□ -0.5
CHRAC1-202ENST00000518971 HIRIP3Q9BW71 556 aaPredicted RBP11.94□□□□□ -0.5
CHRAC1-202ENST00000518971 TRAK1Q9UPV9 953 aa11.94□□□□□ -0.5
CHRAC1-202ENST00000518971 ZNF219Q9P2Y4 722 aaPredicted RBP11.93□□□□□ -0.5
CHRAC1-202ENST00000518971 COL22A1Q8NFW1 1626 aaPredicted RBP11.93□□□□□ -0.5
CHRAC1-202ENST00000518971 DHX57Q6P158 1386 aaKnown RBP11.92□□□□□ -0.5
CHRAC1-202ENST00000518971 ADGRB1O14514 1584 aa11.92□□□□□ -0.5
CHRAC1-202ENST00000518971 NPHP3Q7Z494 1330 aa11.92□□□□□ -0.5
CHRAC1-202ENST00000518971 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
CHRAC1-202ENST00000518971 UPF1Q92900 1129 aaKnown RBP eCLIP11.92□□□□□ -0.5
CHRAC1-202ENST00000518971 USP32Q8NFA0 1604 aa11.92□□□□□ -0.5
CHRAC1-202ENST00000518971 RGS12O14924 1447 aa11.92□□□□□ -0.5
CHRAC1-202ENST00000518971 KRT28Q7Z3Y7 464 aa11.91□□□□□ -0.5
CHRAC1-202ENST00000518971 PMFBP1Q8TBY8 1022 aa11.91□□□□□ -0.5
CHRAC1-202ENST00000518971 CABLES1Q8TDN4 633 aa11.91□□□□□ -0.5
CHRAC1-202ENST00000518971 USP21Q9UK80 565 aa11.91□□□□□ -0.5
CHRAC1-202ENST00000518971 MINK1Q8N4C8 1332 aaPredicted RBP11.9□□□□□ -0.5
CHRAC1-202ENST00000518971 RBM42Q9BTD8 480 aaKnown RBP11.9□□□□□ -0.5
CHRAC1-202ENST00000518971 POGKQ9P215 609 aa11.9□□□□□ -0.5
CHRAC1-202ENST00000518971 MARF1Q9Y4F3 1742 aaKnown RBP11.89□□□□□ -0.51
CHRAC1-202ENST00000518971 SIRT1Q96EB6 747 aa11.89□□□□□ -0.51
CHRAC1-202ENST00000518971 PHF8Q9UPP1 1060 aa11.89□□□□□ -0.51
CHRAC1-202ENST00000518971 SPATA31A3Q5VYP0 1347 aa11.88□□□□□ -0.51
CHRAC1-202ENST00000518971 PRR36Q9H6K5 1346 aa11.88□□□□□ -0.51
CHRAC1-202ENST00000518971 RBM6P78332 1123 aaKnown RBP11.88□□□□□ -0.51
CHRAC1-202ENST00000518971 KIF1AQ12756 1690 aa11.87□□□□□ -0.51
CHRAC1-202ENST00000518971 DLC1Q96QB1 1528 aa11.87□□□□□ -0.51
CHRAC1-202ENST00000518971 LMOD2Q6P5Q4 547 aa11.87□□□□□ -0.51
CHRAC1-202ENST00000518971 FNBP4Q8N3X1 1017 aaPredicted RBP11.87□□□□□ -0.51
CHRAC1-202ENST00000518971 BCL9LQ86UU0 1499 aa11.87□□□□□ -0.51
CHRAC1-202ENST00000518971 ACIN1Q9UKV3 1341 aaKnown RBP11.86□□□□□ -0.51
CHRAC1-202ENST00000518971 CDK12Q9NYV4 1490 aaPredicted RBP11.85□□□□□ -0.51
CHRAC1-202ENST00000518971 HRCP23327 699 aa11.85□□□□□ -0.51
CHRAC1-202ENST00000518971 NBPF1Q3BBV0 1214 aa11.85□□□□□ -0.51
CHRAC1-202ENST00000518971 ARHGEF28Q8N1W1 1705 aaKnown RBP11.85□□□□□ -0.51
CHRAC1-202ENST00000518971 ATRNO75882 1429 aa11.85□□□□□ -0.51
CHRAC1-202ENST00000518971 PSME1Q06323 249 aa11.84□□□□□ -0.51
CHRAC1-202ENST00000518971 TRPC5Q9UL62 973 aaPredicted RBP11.84□□□□□ -0.51
CHRAC1-202ENST00000518971 ADGRB2O60241 1585 aa11.84□□□□□ -0.51
CHRAC1-202ENST00000518971 ABCA3Q99758 1704 aa11.83□□□□□ -0.52
CHRAC1-202ENST00000518971 SIN3AQ96ST3 1273 aa11.83□□□□□ -0.52
CHRAC1-202ENST00000518971 TNS3Q68CZ2 1445 aa11.83□□□□□ -0.52
CHRAC1-202ENST00000518971 TRPM3Q9HCF6 1732 aaPredicted RBP11.83□□□□□ -0.52
CHRAC1-202ENST00000518971 WASLO00401 505 aaPredicted RBP11.82□□□□□ -0.52
CHRAC1-202ENST00000518971 GLI3P10071 1580 aa11.82□□□□□ -0.52
CHRAC1-202ENST00000518971 HAP1P54257 671 aaPredicted RBP11.81□□□□□ -0.52
CHRAC1-202ENST00000518971 GJD4Q96KN9 370 aaPredicted RBP11.81□□□□□ -0.52
CHRAC1-202ENST00000518971 PLCH1Q4KWH8 1693 aa11.81□□□□□ -0.52
CHRAC1-202ENST00000518971 SLIT2O94813 1529 aa11.81□□□□□ -0.52
CHRAC1-202ENST00000518971 FAM83GA6ND36 823 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms