RNA–Protein interactions for RNA: ENST00000518842.1

LAMA4-211, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 480 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-211ENST00000518842 MYO5BQ9ULV0 1848 aa13.53□□□□□ -0.24
LAMA4-211ENST00000518842 PPP1R15AO75807 674 aaPredicted RBP13.53□□□□□ -0.24
LAMA4-211ENST00000518842 PIK3R4Q99570 1358 aa13.53□□□□□ -0.24
LAMA4-211ENST00000518842 DISP3Q9P2K9 1392 aa13.53□□□□□ -0.24
LAMA4-211ENST00000518842 DIP2AQ14689 1571 aa13.53□□□□□ -0.24
LAMA4-211ENST00000518842 XIRP1Q702N8 1843 aaKnown RBP13.53□□□□□ -0.24
LAMA4-211ENST00000518842 SPHKAPQ2M3C7 1700 aa13.52□□□□□ -0.25
LAMA4-211ENST00000518842 CLTCL1P53675 1640 aa13.51□□□□□ -0.25
LAMA4-211ENST00000518842 FAM135BQ49AJ0 1406 aa13.51□□□□□ -0.25
LAMA4-211ENST00000518842 NUTM2DQ5VT03 806 aaPredicted RBP13.51□□□□□ -0.25
LAMA4-211ENST00000518842 PROSER2Q86WR7 435 aaPredicted RBP13.51□□□□□ -0.25
LAMA4-211ENST00000518842 KIF12Q96FN5 646 aa13.51□□□□□ -0.25
LAMA4-211ENST00000518842 SETBP1Q9Y6X0 1596 aa13.49□□□□□ -0.25
LAMA4-211ENST00000518842 PTPRUQ92729 1446 aa13.49□□□□□ -0.25
LAMA4-211ENST00000518842 NCOA3Q9Y6Q9 1424 aa13.49□□□□□ -0.25
LAMA4-211ENST00000518842 BCANQ96GW7 911 aa13.49□□□□□ -0.25
LAMA4-211ENST00000518842 ILDR2Q71H61 639 aa13.48□□□□□ -0.25
LAMA4-211ENST00000518842 MIER1Q8N108 512 aa13.48□□□□□ -0.25
LAMA4-211ENST00000518842 TRIM52Q96A61 297 aa13.48□□□□□ -0.25
LAMA4-211ENST00000518842 RBM33Q96EV2 1170 aaKnown RBP13.48□□□□□ -0.25
LAMA4-211ENST00000518842 NRXN3Q9Y4C0 1643 aa13.48□□□□□ -0.25
LAMA4-211ENST00000518842 NEXMIFQ5QGS0 1516 aa13.48□□□□□ -0.25
LAMA4-211ENST00000518842 POTEMA6NI47 508 aa13.47□□□□□ -0.25
LAMA4-211ENST00000518842 CHD2O14647 1828 aaKnown RBP13.47□□□□□ -0.25
LAMA4-211ENST00000518842 MSH6P52701 1360 aa13.45□□□□□ -0.26
LAMA4-211ENST00000518842 ATN1P54259 1190 aaPredicted RBP13.45□□□□□ -0.26
LAMA4-211ENST00000518842 ZNF326Q5BKZ1 582 aaKnown RBP13.44□□□□□ -0.26
LAMA4-211ENST00000518842 MED1Q15648 1581 aaPredicted RBP13.44□□□□□ -0.26
LAMA4-211ENST00000518842 METP08581 1390 aa13.44□□□□□ -0.26
LAMA4-211ENST00000518842 TIE1P35590 1138 aa13.43□□□□□ -0.26
LAMA4-211ENST00000518842 AMOTL2Q9Y2J4 779 aa13.43□□□□□ -0.26
LAMA4-211ENST00000518842 RPGRIP1LQ68CZ1 1315 aa13.42□□□□□ -0.26
LAMA4-211ENST00000518842 XRN1Q8IZH2 1706 aaKnown RBP13.42□□□□□ -0.26
LAMA4-211ENST00000518842 POTEGQ6S5H5 508 aa13.42□□□□□ -0.26
LAMA4-211ENST00000518842 SCUBE2Q9NQ36 999 aa13.42□□□□□ -0.26
LAMA4-211ENST00000518842 PRAG1Q86YV5 1406 aa13.41□□□□□ -0.26
LAMA4-211ENST00000518842 SETD5Q9C0A6 1442 aa13.41□□□□□ -0.26
LAMA4-211ENST00000518842 POTEJP0CG39 1038 aa13.41□□□□□ -0.26
LAMA4-211ENST00000518842 MPHOSPH9Q99550 1183 aa13.41□□□□□ -0.26
LAMA4-211ENST00000518842 PCDH10Q9P2E7 1040 aa13.41□□□□□ -0.26
LAMA4-211ENST00000518842 SPATA31E1Q6ZUB1 1445 aa13.4□□□□□ -0.26
LAMA4-211ENST00000518842 C19orf44Q9H6X5 657 aa13.4□□□□□ -0.26
LAMA4-211ENST00000518842 BMP2KQ9NSY1 1161 aaPredicted RBP13.4□□□□□ -0.26
LAMA4-211ENST00000518842 SLAIN2Q9P270 581 aa13.4□□□□□ -0.26
LAMA4-211ENST00000518842 ACIN1Q9UKV3 1341 aaKnown RBP13.39□□□□□ -0.27
LAMA4-211ENST00000518842 DCCP43146 1447 aa13.39□□□□□ -0.27
LAMA4-211ENST00000518842 ROBO1Q9Y6N7 1651 aa13.39□□□□□ -0.27
LAMA4-211ENST00000518842 VGFO15240 615 aaPredicted RBP13.38□□□□□ -0.27
LAMA4-211ENST00000518842 MAP3K13O43283 966 aa13.38□□□□□ -0.27
LAMA4-211ENST00000518842 RASEFQ8IZ41 740 aa13.38□□□□□ -0.27
LAMA4-211ENST00000518842 CCDC144AA2RUR9 1427 aa13.38□□□□□ -0.27
LAMA4-211ENST00000518842 CADPS2Q86UW7 1296 aa13.37□□□□□ -0.27
LAMA4-211ENST00000518842 ZBTB47Q9UFB7 747 aaPredicted RBP13.37□□□□□ -0.27
LAMA4-211ENST00000518842 PTCH1Q13635 1447 aa13.37□□□□□ -0.27
LAMA4-211ENST00000518842 KIF1BO60333 1816 aa13.36□□□□□ -0.27
LAMA4-211ENST00000518842 RAB3GAP2Q9H2M9 1393 aa13.36□□□□□ -0.27
LAMA4-211ENST00000518842 SOCS7O14512 581 aa13.36□□□□□ -0.27
LAMA4-211ENST00000518842 SGIP1Q9BQI5 828 aa13.36□□□□□ -0.27
LAMA4-211ENST00000518842 SETD1AO15047 1707 aaKnown RBP13.36□□□□□ -0.27
LAMA4-211ENST00000518842 ADGRL3Q9HAR2 1447 aa13.35□□□□□ -0.27
LAMA4-211ENST00000518842 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.35□□□□□ -0.27
LAMA4-211ENST00000518842 ROBO2Q9HCK4 1378 aa13.34□□□□□ -0.27
LAMA4-211ENST00000518842 ATF3P18847 181 aa13.34□□□□□ -0.27
LAMA4-211ENST00000518842 C14orf37Q86TY3 774 aa13.34□□□□□ -0.27
LAMA4-211ENST00000518842 PLCD3Q8N3E9 789 aa13.34□□□□□ -0.27
LAMA4-211ENST00000518842 ADGRF5Q8IZF2 1346 aa13.34□□□□□ -0.27
LAMA4-211ENST00000518842 ANKRD30BQ9BXX2 1392 aa13.33□□□□□ -0.27
LAMA4-211ENST00000518842 MST1RQ04912 1400 aa13.33□□□□□ -0.28
LAMA4-211ENST00000518842 AHDC1Q5TGY3 1603 aaPredicted RBP13.33□□□□□ -0.28
LAMA4-211ENST00000518842 PPLO60437 1756 aa13.32□□□□□ -0.28
LAMA4-211ENST00000518842 COL16A1Q07092 1604 aaPredicted RBP13.32□□□□□ -0.28
LAMA4-211ENST00000518842 BRINP3Q76B58 766 aa13.32□□□□□ -0.28
LAMA4-211ENST00000518842 TRPC6Q9Y210 931 aa13.32□□□□□ -0.28
LAMA4-211ENST00000518842 JCADQ9P266 1359 aa13.32□□□□□ -0.28
LAMA4-211ENST00000518842 HRCP23327 699 aa13.31□□□□□ -0.28
LAMA4-211ENST00000518842 RGS17Q9UGC6 210 aaPredicted RBP13.31□□□□□ -0.28
LAMA4-211ENST00000518842 PIK3C2GO75747 1445 aa13.3□□□□□ -0.28
LAMA4-211ENST00000518842 TECPR2O15040 1411 aa13.3□□□□□ -0.28
LAMA4-211ENST00000518842 NRXN1Q9ULB1 1477 aa13.29□□□□□ -0.28
LAMA4-211ENST00000518842 ASXL1Q8IXJ9 1541 aa13.29□□□□□ -0.28
LAMA4-211ENST00000518842 POTEFA5A3E0 1075 aa13.29□□□□□ -0.28
LAMA4-211ENST00000518842 RGL3Q3MIN7 710 aa13.29□□□□□ -0.28
LAMA4-211ENST00000518842 TTLL13PA6NNM8 815 aa13.28□□□□□ -0.28
LAMA4-211ENST00000518842 LRPPRCP42704 1394 aaKnown RBP13.28□□□□□ -0.28
LAMA4-211ENST00000518842 PHLPP1O60346 1717 aa13.27□□□□□ -0.28
LAMA4-211ENST00000518842 NALCNQ8IZF0 1738 aa13.27□□□□□ -0.28
LAMA4-211ENST00000518842 IFT172Q9UG01 1749 aa13.27□□□□□ -0.28
LAMA4-211ENST00000518842 IER5LQ5T953 404 aa13.27□□□□□ -0.29
LAMA4-211ENST00000518842 ABCC11Q96J66 1382 aa13.27□□□□□ -0.29
LAMA4-211ENST00000518842 MYOM2P54296 1465 aa13.27□□□□□ -0.29
LAMA4-211ENST00000518842 SEC24BO95487 1268 aa13.26□□□□□ -0.29
LAMA4-211ENST00000518842 C1orf167Q5SNV9 1468 aa13.26□□□□□ -0.29
LAMA4-211ENST00000518842 LRP6O75581 1613 aa13.24□□□□□ -0.29
LAMA4-211ENST00000518842 SPATA31A6Q5VVP1 1343 aa13.24□□□□□ -0.29
LAMA4-211ENST00000518842 C14orf93Q9H972 538 aaKnown RBP13.24□□□□□ -0.29
LAMA4-211ENST00000518842 PCDHB13Q9Y5F0 798 aa13.24□□□□□ -0.29
LAMA4-211ENST00000518842 NUBP1P53384 320 aa13.23□□□□□ -0.29
LAMA4-211ENST00000518842 FAM163AQ96GL9 167 aaPredicted RBP13.23□□□□□ -0.29
LAMA4-211ENST00000518842 NHSL1Q5SYE7 1610 aa13.23□□□□□ -0.29
LAMA4-211ENST00000518842 CDC42BPGQ6DT37 1551 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms