RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 FAM135BQ49AJ0 1406 aa25.17■■□□□ 1.62
TRAM1-202ENST00000518678 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.13■■□□□ 1.61
TRAM1-202ENST00000518678 NCOA3Q9Y6Q9 1424 aa25.12■■□□□ 1.61
TRAM1-202ENST00000518678 MSH6P52701 1360 aa25.11■■□□□ 1.61
TRAM1-202ENST00000518678 PLEKHH1Q9ULM0 1364 aa25.11■■□□□ 1.61
TRAM1-202ENST00000518678 WAPLQ7Z5K2 1190 aa25.11■■□□□ 1.61
TRAM1-202ENST00000518678 PRAM1Q96QH2 718 aa25.11■■□□□ 1.61
TRAM1-202ENST00000518678 EIF3AQ14152 1382 aaKnown RBP25.09■■□□□ 1.61
TRAM1-202ENST00000518678 POGKQ9P215 609 aa25.09■■□□□ 1.61
TRAM1-202ENST00000518678 CENPJQ9HC77 1338 aaPredicted RBP25.06■■□□□ 1.6
TRAM1-202ENST00000518678 PHLPP1O60346 1717 aa25.06■■□□□ 1.6
TRAM1-202ENST00000518678 NALCNQ8IZF0 1738 aa25.06■■□□□ 1.6
TRAM1-202ENST00000518678 USP47Q96K76 1375 aa25.05■■□□□ 1.6
TRAM1-202ENST00000518678 ADGRL3Q9HAR2 1447 aa25.05■■□□□ 1.6
TRAM1-202ENST00000518678 SAFB2Q14151 953 aaKnown RBP eCLIP25.04■■□□□ 1.6
TRAM1-202ENST00000518678 SLAIN2Q9P270 581 aa25.04■■□□□ 1.6
TRAM1-202ENST00000518678 QRICH2Q9H0J4 1663 aa25.04■■□□□ 1.6
TRAM1-202ENST00000518678 C14orf37Q86TY3 774 aa25.03■■□□□ 1.6
TRAM1-202ENST00000518678 SOCS7O14512 581 aa25.01■■□□□ 1.59
TRAM1-202ENST00000518678 C19orf44Q9H6X5 657 aa25■■□□□ 1.59
TRAM1-202ENST00000518678 ADGRB2O60241 1585 aa25■■□□□ 1.59
TRAM1-202ENST00000518678 COL16A1Q07092 1604 aaPredicted RBP24.99■■□□□ 1.59
TRAM1-202ENST00000518678 MINK1Q8N4C8 1332 aaPredicted RBP24.99■■□□□ 1.59
TRAM1-202ENST00000518678 CDC42BPGQ6DT37 1551 aa24.98■■□□□ 1.59
TRAM1-202ENST00000518678 DCCP43146 1447 aa24.98■■□□□ 1.59
TRAM1-202ENST00000518678 ST20-MTHFSA0A0A6YYL1 179 aa24.98■■□□□ 1.59
TRAM1-202ENST00000518678 EIF4G2P78344 907 aaKnown RBP eCLIP24.98■■□□□ 1.59
TRAM1-202ENST00000518678 SBNO2Q9Y2G9 1366 aa24.97■■□□□ 1.59
TRAM1-202ENST00000518678 PHF23Q9BUL5 403 aaPredicted RBP24.95■■□□□ 1.58
TRAM1-202ENST00000518678 HSPA5P11021 654 aaKnown RBP24.94■■□□□ 1.58
TRAM1-202ENST00000518678 HIRIP3Q9BW71 556 aaPredicted RBP24.94■■□□□ 1.58
TRAM1-202ENST00000518678 RGS17Q9UGC6 210 aaPredicted RBP24.94■■□□□ 1.58
TRAM1-202ENST00000518678 ATF3P18847 181 aa24.92■■□□□ 1.58
TRAM1-202ENST00000518678 CADPS2Q86UW7 1296 aa24.92■■□□□ 1.58
TRAM1-202ENST00000518678 TESK2Q96S53 571 aa24.92■■□□□ 1.58
TRAM1-202ENST00000518678 FMN2Q9NZ56 1722 aa24.91■■□□□ 1.58
TRAM1-202ENST00000518678 WASLO00401 505 aaPredicted RBP24.9■■□□□ 1.58
TRAM1-202ENST00000518678 TULP4Q9NRJ4 1543 aa24.9■■□□□ 1.58
TRAM1-202ENST00000518678 MST1RQ04912 1400 aa24.89■■□□□ 1.58
TRAM1-202ENST00000518678 SLC24A1O60721 1099 aa24.89■■□□□ 1.58
TRAM1-202ENST00000518678 AHDC1Q5TGY3 1603 aaPredicted RBP24.89■■□□□ 1.57
TRAM1-202ENST00000518678 EVC2Q86UK5 1308 aa24.87■■□□□ 1.57
TRAM1-202ENST00000518678 BRINP3Q76B58 766 aa24.87■■□□□ 1.57
TRAM1-202ENST00000518678 CDK19Q9BWU1 502 aa24.86■■□□□ 1.57
TRAM1-202ENST00000518678 LRP6O75581 1613 aa24.85■■□□□ 1.57
TRAM1-202ENST00000518678 NHSL1Q5SYE7 1610 aa24.84■■□□□ 1.57
TRAM1-202ENST00000518678 DDX17Q92841 729 aaKnown RBP24.84■■□□□ 1.57
TRAM1-202ENST00000518678 ANKARQ7Z5J8 1434 aa24.83■■□□□ 1.57
TRAM1-202ENST00000518678 C1orf167Q5SNV9 1468 aa24.83■■□□□ 1.56
TRAM1-202ENST00000518678 USP32Q8NFA0 1604 aa24.83■■□□□ 1.56
TRAM1-202ENST00000518678 TMF1P82094 1093 aa24.82■■□□□ 1.56
TRAM1-202ENST00000518678 JCADQ9P266 1359 aa24.81■■□□□ 1.56
TRAM1-202ENST00000518678 NUTM2FA1L443 756 aa24.81■■□□□ 1.56
TRAM1-202ENST00000518678 SRPK2P78362 688 aaKnown RBP24.81■■□□□ 1.56
TRAM1-202ENST00000518678 SHPRHQ149N8 1683 aa24.81■■□□□ 1.56
TRAM1-202ENST00000518678 CABP2Q9NPB3 220 aa24.8■■□□□ 1.56
TRAM1-202ENST00000518678 ATP7BP35670 1465 aa24.8■■□□□ 1.56
TRAM1-202ENST00000518678 PRR36Q9H6K5 1346 aa24.8■■□□□ 1.56
TRAM1-202ENST00000518678 POTEAQ6S8J7 498 aa24.79■■□□□ 1.56
TRAM1-202ENST00000518678 RGPD8O14715 1765 aaPredicted RBP24.78■■□□□ 1.56
TRAM1-202ENST00000518678 NUDT16Q96DE0 195 aaKnown RBP24.78■■□□□ 1.56
TRAM1-202ENST00000518678 PUS7Q96PZ0 661 aaKnown RBP24.78■■□□□ 1.56
TRAM1-202ENST00000518678 TOPAZ1Q8N9V7 1692 aa24.76■■□□□ 1.55
TRAM1-202ENST00000518678 ITSN1Q15811 1721 aa24.76■■□□□ 1.55
TRAM1-202ENST00000518678 CDCA8Q53HL2 280 aa24.75■■□□□ 1.55
TRAM1-202ENST00000518678 ATAD2Q6PL18 1390 aa24.75■■□□□ 1.55
TRAM1-202ENST00000518678 ESCO1Q5FWF5 840 aa24.73■■□□□ 1.55
TRAM1-202ENST00000518678 ORAI2Q96SN7 254 aa24.73■■□□□ 1.55
TRAM1-202ENST00000518678 CCDC61Q9Y6R9 512 aa24.73■■□□□ 1.55
TRAM1-202ENST00000518678 KIF1AQ12756 1690 aa24.72■■□□□ 1.55
TRAM1-202ENST00000518678 C11orf95C9JLR9 678 aaPredicted RBP24.71■■□□□ 1.55
TRAM1-202ENST00000518678 PPIP5K1Q6PFW1 1433 aa24.7■■□□□ 1.55
TRAM1-202ENST00000518678 PHF8Q9UPP1 1060 aa24.7■■□□□ 1.54
TRAM1-202ENST00000518678 PLEKHG3A1L390 1219 aa24.67■■□□□ 1.54
TRAM1-202ENST00000518678 NUTM2BA6NNL0 878 aaPredicted RBP24.67■■□□□ 1.54
TRAM1-202ENST00000518678 NUTM2EB1AL46 878 aaPredicted RBP24.67■■□□□ 1.54
TRAM1-202ENST00000518678 NUTM2AQ8IVF1 878 aaPredicted RBP24.67■■□□□ 1.54
TRAM1-202ENST00000518678 PMFBP1Q8TBY8 1022 aa24.66■■□□□ 1.54
TRAM1-202ENST00000518678 CABP1Q9NZU7 370 aa24.66■■□□□ 1.54
TRAM1-202ENST00000518678 KIF7Q2M1P5 1343 aa24.65■■□□□ 1.54
TRAM1-202ENST00000518678 NINLQ9Y2I6 1382 aa24.65■■□□□ 1.54
TRAM1-202ENST00000518678 SPATA31A6Q5VVP1 1343 aa24.64■■□□□ 1.54
TRAM1-202ENST00000518678 POLR3AO14802 1390 aaPredicted RBP24.64■■□□□ 1.53
TRAM1-202ENST00000518678 MYOM1P52179 1685 aa24.63■■□□□ 1.53
TRAM1-202ENST00000518678 TMC1Q8TDI8 760 aa24.63■■□□□ 1.53
TRAM1-202ENST00000518678 MEX3CQ5U5Q3 659 aaKnown RBP24.62■■□□□ 1.53
TRAM1-202ENST00000518678 POLR3GLQ9BT43 218 aa24.62■■□□□ 1.53
TRAM1-202ENST00000518678 PNPLA6Q8IY17 1366 aa24.62■■□□□ 1.53
TRAM1-202ENST00000518678 CCDC7Q96M83 1385 aa24.62■■□□□ 1.53
TRAM1-202ENST00000518678 ACEP12821 1306 aa24.61■■□□□ 1.53
TRAM1-202ENST00000518678 WASHC2AQ641Q2 1341 aa24.61■■□□□ 1.53
TRAM1-202ENST00000518678 FOXO3O43524 673 aa24.61■■□□□ 1.53
TRAM1-202ENST00000518678 NGDNQ8NEJ9 315 aaKnown RBP24.61■■□□□ 1.53
TRAM1-202ENST00000518678 SLC12A5Q9H2X9 1139 aa24.61■■□□□ 1.53
TRAM1-202ENST00000518678 NPHP3Q7Z494 1330 aa24.61■■□□□ 1.53
TRAM1-202ENST00000518678 AKAP12Q02952 1782 aa24.59■■□□□ 1.53
TRAM1-202ENST00000518678 CD163L1Q9NR16 1453 aa24.58■■□□□ 1.53
TRAM1-202ENST00000518678 CPSF1Q10570 1443 aaKnown RBP24.58■■□□□ 1.53
TRAM1-202ENST00000518678 PXDNQ92626 1479 aa24.58■■□□□ 1.52
TRAM1-202ENST00000518678 XPCQ01831 940 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms