RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 NRXN3Q9Y4C0 1643 aa13.57□□□□□ -0.24
PVT1-207ENST00000518528 FOXO3O43524 673 aa13.57□□□□□ -0.24
PVT1-207ENST00000518528 ITGAEP38570 1179 aa13.57□□□□□ -0.24
PVT1-207ENST00000518528 HAP1P54257 671 aaPredicted RBP13.56□□□□□ -0.24
PVT1-207ENST00000518528 DEFB132Q7Z7B7 95 aa13.56□□□□□ -0.24
PVT1-207ENST00000518528 LAMC1P11047 1609 aa13.56□□□□□ -0.24
PVT1-207ENST00000518528 XPCQ01831 940 aaPredicted RBP13.55□□□□□ -0.24
PVT1-207ENST00000518528 SEPT12Q8IYM1 358 aa13.55□□□□□ -0.24
PVT1-207ENST00000518528 RPGRIP1LQ68CZ1 1315 aa13.55□□□□□ -0.24
PVT1-207ENST00000518528 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
PVT1-207ENST00000518528 RALGAPBQ86X10 1494 aa13.54□□□□□ -0.24
PVT1-207ENST00000518528 NALCNQ8IZF0 1738 aa13.53□□□□□ -0.24
PVT1-207ENST00000518528 BAG6P46379 1132 aa13.53□□□□□ -0.24
PVT1-207ENST00000518528 PRAG1Q86YV5 1406 aa13.53□□□□□ -0.24
PVT1-207ENST00000518528 VPS72Q15906 364 aa13.52□□□□□ -0.25
PVT1-207ENST00000518528 KRT27Q7Z3Y8 459 aa13.52□□□□□ -0.25
PVT1-207ENST00000518528 NEXMIFQ5QGS0 1516 aa13.52□□□□□ -0.25
PVT1-207ENST00000518528 COL22A1Q8NFW1 1626 aaPredicted RBP13.52□□□□□ -0.25
PVT1-207ENST00000518528 A0A0G2JS52 829 aa13.51□□□□□ -0.25
PVT1-207ENST00000518528 MYT1Q01538 1121 aa13.51□□□□□ -0.25
PVT1-207ENST00000518528 PXDNQ92626 1479 aa13.5□□□□□ -0.25
PVT1-207ENST00000518528 SPATA31A3Q5VYP0 1347 aa13.5□□□□□ -0.25
PVT1-207ENST00000518528 SLIT2O94813 1529 aa13.49□□□□□ -0.25
PVT1-207ENST00000518528 NUTM2FA1L443 756 aa13.49□□□□□ -0.25
PVT1-207ENST00000518528 HRCP23327 699 aa13.49□□□□□ -0.25
PVT1-207ENST00000518528 PSME1Q06323 249 aa13.49□□□□□ -0.25
PVT1-207ENST00000518528 PSDA5PKW4 1024 aaPredicted RBP13.48□□□□□ -0.25
PVT1-207ENST00000518528 ONECUT3O60422 494 aaPredicted RBP13.48□□□□□ -0.25
PVT1-207ENST00000518528 KRT28Q7Z3Y7 464 aa13.48□□□□□ -0.25
PVT1-207ENST00000518528 EP400Q96L91 3159 aa13.48□□□□□ -0.25
PVT1-207ENST00000518528 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
PVT1-207ENST00000518528 NAIPQ13075 1403 aa13.47□□□□□ -0.25
PVT1-207ENST00000518528 STK26Q9P289 416 aa13.47□□□□□ -0.25
PVT1-207ENST00000518528 SPHKAPQ2M3C7 1700 aa13.47□□□□□ -0.25
PVT1-207ENST00000518528 CDC42BPGQ6DT37 1551 aa13.46□□□□□ -0.25
PVT1-207ENST00000518528 LMOD2Q6P5Q4 547 aa13.45□□□□□ -0.26
PVT1-207ENST00000518528 LRP5O75197 1615 aa13.45□□□□□ -0.26
PVT1-207ENST00000518528 CLTCL1P53675 1640 aa13.44□□□□□ -0.26
PVT1-207ENST00000518528 WAPLQ7Z5K2 1190 aa13.44□□□□□ -0.26
PVT1-207ENST00000518528 GLI3P10071 1580 aa13.44□□□□□ -0.26
PVT1-207ENST00000518528 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
PVT1-207ENST00000518528 ARHGEF10O15013 1369 aa13.43□□□□□ -0.26
PVT1-207ENST00000518528 PHF8Q9UPP1 1060 aa13.42□□□□□ -0.26
PVT1-207ENST00000518528 ABCC11Q96J66 1382 aa13.42□□□□□ -0.26
PVT1-207ENST00000518528 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.42□□□□□ -0.26
PVT1-207ENST00000518528 TNS3Q68CZ2 1445 aa13.41□□□□□ -0.26
PVT1-207ENST00000518528 EN1Q05925 392 aaPredicted RBP13.41□□□□□ -0.26
PVT1-207ENST00000518528 R3HDM1Q15032 1099 aaKnown RBP13.41□□□□□ -0.26
PVT1-207ENST00000518528 FAM98CQ17RN3 349 aaKnown RBP13.41□□□□□ -0.26
PVT1-207ENST00000518528 CABLES1Q8TDN4 633 aa13.41□□□□□ -0.26
PVT1-207ENST00000518528 SLC4A1APQ9BWU0 796 aaKnown RBP13.41□□□□□ -0.26
PVT1-207ENST00000518528 DCAF8L1A6NGE4 600 aa13.4□□□□□ -0.26
PVT1-207ENST00000518528 SBNO1A3KN83 1393 aa13.4□□□□□ -0.26
PVT1-207ENST00000518528 TECPR2O15040 1411 aa13.39□□□□□ -0.27
PVT1-207ENST00000518528 FAM83GA6ND36 823 aa13.39□□□□□ -0.27
PVT1-207ENST00000518528 YY1P25490 414 aa13.39□□□□□ -0.27
PVT1-207ENST00000518528 ADGRF5Q8IZF2 1346 aa13.39□□□□□ -0.27
PVT1-207ENST00000518528 ANKRD30BQ9BXX2 1392 aa13.38□□□□□ -0.27
PVT1-207ENST00000518528 SIRT1Q96EB6 747 aa13.38□□□□□ -0.27
PVT1-207ENST00000518528 KIF1BO60333 1816 aa13.38□□□□□ -0.27
PVT1-207ENST00000518528 MARF1Q9Y4F3 1742 aaKnown RBP13.38□□□□□ -0.27
PVT1-207ENST00000518528 USP32Q8NFA0 1604 aa13.38□□□□□ -0.27
PVT1-207ENST00000518528 RGL3Q3MIN7 710 aa13.37□□□□□ -0.27
PVT1-207ENST00000518528 TMEM132EQ6IEE7 984 aa13.37□□□□□ -0.27
PVT1-207ENST00000518528 BTG4Q9NY30 223 aa13.37□□□□□ -0.27
PVT1-207ENST00000518528 RRBP1Q9P2E9 1410 aaKnown RBP13.36□□□□□ -0.27
PVT1-207ENST00000518528 PLEKHH1Q9ULM0 1364 aa13.35□□□□□ -0.27
PVT1-207ENST00000518528 KIF1AQ12756 1690 aa13.34□□□□□ -0.27
PVT1-207ENST00000518528 DISP2A7MBM2 1401 aa13.34□□□□□ -0.27
PVT1-207ENST00000518528 FAM196AQ6ZSG2 479 aa13.34□□□□□ -0.27
PVT1-207ENST00000518528 YTHDC2Q9H6S0 1430 aaKnown RBP13.33□□□□□ -0.28
PVT1-207ENST00000518528 EZH2Q15910 746 aaKnown RBP13.33□□□□□ -0.28
PVT1-207ENST00000518528 NBPF8Q3BBV2 869 aa13.33□□□□□ -0.28
PVT1-207ENST00000518528 NBPF14Q5TI25 921 aa13.33□□□□□ -0.28
PVT1-207ENST00000518528 SPATA31A5Q5VU36 1347 aa13.33□□□□□ -0.28
PVT1-207ENST00000518528 SPATA31A7Q8IWB4 1347 aa13.33□□□□□ -0.28
PVT1-207ENST00000518528 GPRASP1Q5JY77 1395 aa13.32□□□□□ -0.28
PVT1-207ENST00000518528 PARD3Q8TEW0 1356 aa13.32□□□□□ -0.28
PVT1-207ENST00000518528 FAM182BQ5T319 152 aa13.32□□□□□ -0.28
PVT1-207ENST00000518528 POGKQ9P215 609 aa13.32□□□□□ -0.28
PVT1-207ENST00000518528 PPP1R1BQ9UD71 204 aaPredicted RBP13.32□□□□□ -0.28
PVT1-207ENST00000518528 DHX57Q6P158 1386 aaKnown RBP13.32□□□□□ -0.28
PVT1-207ENST00000518528 APBA3O96018 575 aa13.31□□□□□ -0.28
PVT1-207ENST00000518528 PMFBP1Q8TBY8 1022 aa13.31□□□□□ -0.28
PVT1-207ENST00000518528 CAMKK2Q96RR4 588 aa13.31□□□□□ -0.28
PVT1-207ENST00000518528 PRDM11Q9NQV5 511 aa13.31□□□□□ -0.28
PVT1-207ENST00000518528 BRWD3Q6RI45 1802 aa13.31□□□□□ -0.28
PVT1-207ENST00000518528 NWD2Q9ULI1 1742 aa13.3□□□□□ -0.28
PVT1-207ENST00000518528 NRXN1Q9ULB1 1477 aa13.3□□□□□ -0.28
PVT1-207ENST00000518528 TRIM37O94972 964 aa13.3□□□□□ -0.28
PVT1-207ENST00000518528 SAFB2Q14151 953 aaKnown RBP eCLIP13.3□□□□□ -0.28
PVT1-207ENST00000518528 PPARGC1BQ86YN6 1023 aaKnown RBP13.3□□□□□ -0.28
PVT1-207ENST00000518528 PRAM1Q96QH2 718 aa13.29□□□□□ -0.28
PVT1-207ENST00000518528 C14orf93Q9H972 538 aaKnown RBP13.29□□□□□ -0.28
PVT1-207ENST00000518528 ANKARQ7Z5J8 1434 aa13.29□□□□□ -0.28
PVT1-207ENST00000518528 PDE3BQ13370 1112 aa13.28□□□□□ -0.28
PVT1-207ENST00000518528 SPON1Q9HCB6 807 aa13.28□□□□□ -0.28
PVT1-207ENST00000518528 EIF3AQ14152 1382 aaKnown RBP13.28□□□□□ -0.28
PVT1-207ENST00000518528 PIK3C2GO75747 1445 aa13.28□□□□□ -0.28
PVT1-207ENST00000518528 FMN2Q9NZ56 1722 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms