RNA–Protein interactions for RNA: ENST00000518462.1

REPIN1-216, Transcript of replication initiator 1, humanhuman

TSL 4

Gene REPIN1, Length 621 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-216ENST00000518462 SCAF1Q9H7N4 1312 aaKnown RBP25.83■■□□□ 1.73
REPIN1-216ENST00000518462 GPRASP1Q5JY77 1395 aa25.82■■□□□ 1.72
REPIN1-216ENST00000518462 ROBO1Q9Y6N7 1651 aa25.82■■□□□ 1.72
REPIN1-216ENST00000518462 ARHGEF28Q8N1W1 1705 aaKnown RBP25.82■■□□□ 1.72
REPIN1-216ENST00000518462 ADGRB2O60241 1585 aa25.82■■□□□ 1.72
REPIN1-216ENST00000518462 NBPF1Q3BBV0 1214 aa25.81■■□□□ 1.72
REPIN1-216ENST00000518462 PRAM1Q96QH2 718 aa25.81■■□□□ 1.72
REPIN1-216ENST00000518462 TRAK1Q9UPV9 953 aa25.81■■□□□ 1.72
REPIN1-216ENST00000518462 RALGAPBQ86X10 1494 aa25.8■■□□□ 1.72
REPIN1-216ENST00000518462 CCER1Q8TC90 406 aaPredicted RBP25.79■■□□□ 1.72
REPIN1-216ENST00000518462 NBPF8Q3BBV2 869 aa25.78■■□□□ 1.72
REPIN1-216ENST00000518462 C1orf167Q5SNV9 1468 aa25.78■■□□□ 1.72
REPIN1-216ENST00000518462 POGKQ9P215 609 aa25.77■■□□□ 1.72
REPIN1-216ENST00000518462 ROCK2O75116 1388 aaKnown RBP25.77■■□□□ 1.72
REPIN1-216ENST00000518462 HSPA1LP34931 641 aa25.74■■□□□ 1.71
REPIN1-216ENST00000518462 FMN2Q9NZ56 1722 aa25.74■■□□□ 1.71
REPIN1-216ENST00000518462 AHDC1Q5TGY3 1603 aaPredicted RBP25.74■■□□□ 1.71
REPIN1-216ENST00000518462 BRINP3Q76B58 766 aa25.73■■□□□ 1.71
REPIN1-216ENST00000518462 ANKARQ7Z5J8 1434 aa25.7■■□□□ 1.7
REPIN1-216ENST00000518462 EIF3AQ14152 1382 aaKnown RBP25.69■■□□□ 1.7
REPIN1-216ENST00000518462 SAFB2Q14151 953 aaKnown RBP eCLIP25.68■■□□□ 1.7
REPIN1-216ENST00000518462 CENPJQ9HC77 1338 aaPredicted RBP25.67■■□□□ 1.7
REPIN1-216ENST00000518462 NHSL1Q5SYE7 1610 aa25.66■■□□□ 1.7
REPIN1-216ENST00000518462 TULP4Q9NRJ4 1543 aa25.65■■□□□ 1.7
REPIN1-216ENST00000518462 COL16A1Q07092 1604 aaPredicted RBP25.65■■□□□ 1.7
REPIN1-216ENST00000518462 MINK1Q8N4C8 1332 aaPredicted RBP25.64■■□□□ 1.7
REPIN1-216ENST00000518462 PHLPP1O60346 1717 aa25.63■■□□□ 1.69
REPIN1-216ENST00000518462 WASLO00401 505 aaPredicted RBP25.63■■□□□ 1.69
REPIN1-216ENST00000518462 CARD11Q9BXL7 1154 aa25.63■■□□□ 1.69
REPIN1-216ENST00000518462 SBNO2Q9Y2G9 1366 aa25.62■■□□□ 1.69
REPIN1-216ENST00000518462 KIF1AQ12756 1690 aa25.61■■□□□ 1.69
REPIN1-216ENST00000518462 QRICH2Q9H0J4 1663 aa25.61■■□□□ 1.69
REPIN1-216ENST00000518462 USP32Q8NFA0 1604 aa25.6■■□□□ 1.69
REPIN1-216ENST00000518462 ORAI2Q96SN7 254 aa25.6■■□□□ 1.69
REPIN1-216ENST00000518462 HIRIP3Q9BW71 556 aaPredicted RBP25.59■■□□□ 1.69
REPIN1-216ENST00000518462 ESCO1Q5FWF5 840 aa25.57■■□□□ 1.68
REPIN1-216ENST00000518462 ATP7BP35670 1465 aa25.57■■□□□ 1.68
REPIN1-216ENST00000518462 NPHP3Q7Z494 1330 aa25.56■■□□□ 1.68
REPIN1-216ENST00000518462 JCADQ9P266 1359 aa25.56■■□□□ 1.68
REPIN1-216ENST00000518462 SOS2Q07890 1332 aaPredicted RBP25.55■■□□□ 1.68
REPIN1-216ENST00000518462 NUTM2FA1L443 756 aa25.54■■□□□ 1.68
REPIN1-216ENST00000518462 PRR36Q9H6K5 1346 aa25.54■■□□□ 1.68
REPIN1-216ENST00000518462 PXDNQ92626 1479 aa25.53■■□□□ 1.68
REPIN1-216ENST00000518462 CDK19Q9BWU1 502 aa25.52■■□□□ 1.68
REPIN1-216ENST00000518462 PHF8Q9UPP1 1060 aa25.52■■□□□ 1.68
REPIN1-216ENST00000518462 ITSN1Q15811 1721 aa25.51■■□□□ 1.68
REPIN1-216ENST00000518462 SHPRHQ149N8 1683 aa25.51■■□□□ 1.67
REPIN1-216ENST00000518462 TOPAZ1Q8N9V7 1692 aa25.51■■□□□ 1.67
REPIN1-216ENST00000518462 RGPD8O14715 1765 aaPredicted RBP25.49■■□□□ 1.67
REPIN1-216ENST00000518462 EVC2Q86UK5 1308 aa25.49■■□□□ 1.67
REPIN1-216ENST00000518462 LRRC59Q96AG4 307 aaKnown RBP25.49■■□□□ 1.67
REPIN1-216ENST00000518462 NUDT16Q96DE0 195 aaKnown RBP25.48■■□□□ 1.67
REPIN1-216ENST00000518462 FOXO3O43524 673 aa25.47■■□□□ 1.67
REPIN1-216ENST00000518462 SLC24A1O60721 1099 aa25.47■■□□□ 1.67
REPIN1-216ENST00000518462 DDX17Q92841 729 aaKnown RBP25.47■■□□□ 1.67
REPIN1-216ENST00000518462 USP47Q96K76 1375 aa25.46■■□□□ 1.67
REPIN1-216ENST00000518462 CCDC61Q9Y6R9 512 aa25.46■■□□□ 1.67
REPIN1-216ENST00000518462 SPATA31A6Q5VVP1 1343 aa25.45■■□□□ 1.66
REPIN1-216ENST00000518462 MED1Q15648 1581 aaPredicted RBP25.44■■□□□ 1.66
REPIN1-216ENST00000518462 PNPLA6Q8IY17 1366 aa25.44■■□□□ 1.66
REPIN1-216ENST00000518462 SRPK2P78362 688 aaKnown RBP25.43■■□□□ 1.66
REPIN1-216ENST00000518462 POLR3AO14802 1390 aaPredicted RBP25.43■■□□□ 1.66
REPIN1-216ENST00000518462 PLEKHG3A1L390 1219 aa25.42■■□□□ 1.66
REPIN1-216ENST00000518462 SBNO1A3KN83 1393 aa25.42■■□□□ 1.66
REPIN1-216ENST00000518462 TESK2Q96S53 571 aa25.41■■□□□ 1.66
REPIN1-216ENST00000518462 ATAD2Q6PL18 1390 aa25.41■■□□□ 1.66
REPIN1-216ENST00000518462 COL22A1Q8NFW1 1626 aaPredicted RBP25.41■■□□□ 1.66
REPIN1-216ENST00000518462 ST20-MTHFSA0A0A6YYL1 179 aa25.4■■□□□ 1.66
REPIN1-216ENST00000518462 PUS7Q96PZ0 661 aaKnown RBP25.4■■□□□ 1.66
REPIN1-216ENST00000518462 PSME1Q06323 249 aa25.39■■□□□ 1.66
REPIN1-216ENST00000518462 PMFBP1Q8TBY8 1022 aa25.39■■□□□ 1.66
REPIN1-216ENST00000518462 CABP2Q9NPB3 220 aa25.39■■□□□ 1.66
REPIN1-216ENST00000518462 PPIP5K1Q6PFW1 1433 aa25.38■■□□□ 1.65
REPIN1-216ENST00000518462 KRT28Q7Z3Y7 464 aa25.38■■□□□ 1.65
REPIN1-216ENST00000518462 SPATA31A3Q5VYP0 1347 aa25.37■■□□□ 1.65
REPIN1-216ENST00000518462 TNS3Q68CZ2 1445 aa25.37■■□□□ 1.65
REPIN1-216ENST00000518462 TRPM3Q9HCF6 1732 aaPredicted RBP25.36■■□□□ 1.65
REPIN1-216ENST00000518462 NGDNQ8NEJ9 315 aaKnown RBP25.35■■□□□ 1.65
REPIN1-216ENST00000518462 BRD4O60885 1362 aaPredicted RBP25.34■■□□□ 1.65
REPIN1-216ENST00000518462 XPCQ01831 940 aaPredicted RBP25.34■■□□□ 1.65
REPIN1-216ENST00000518462 LRP6O75581 1613 aa25.34■■□□□ 1.65
REPIN1-216ENST00000518462 ARHGEF10O15013 1369 aa25.33■■□□□ 1.65
REPIN1-216ENST00000518462 ACEP12821 1306 aa25.33■■□□□ 1.64
REPIN1-216ENST00000518462 ALS2Q96Q42 1657 aa25.3■■□□□ 1.64
REPIN1-216ENST00000518462 NINLQ9Y2I6 1382 aa25.3■■□□□ 1.64
REPIN1-216ENST00000518462 CABP1Q9NZU7 370 aa25.29■■□□□ 1.64
REPIN1-216ENST00000518462 TMF1P82094 1093 aa25.28■■□□□ 1.64
REPIN1-216ENST00000518462 EIF4G2P78344 907 aaKnown RBP eCLIP25.27■■□□□ 1.64
REPIN1-216ENST00000518462 USP6P35125 1406 aa25.27■■□□□ 1.64
REPIN1-216ENST00000518462 CPSF1Q10570 1443 aaKnown RBP25.27■■□□□ 1.64
REPIN1-216ENST00000518462 DISP3Q9P2K9 1392 aa25.26■■□□□ 1.63
REPIN1-216ENST00000518462 CDCA8Q53HL2 280 aa25.25■■□□□ 1.63
REPIN1-216ENST00000518462 SSH2Q76I76 1423 aa25.24■■□□□ 1.63
REPIN1-216ENST00000518462 ZNF692Q9BU19 519 aaPredicted RBP25.23■■□□□ 1.63
REPIN1-216ENST00000518462 AKAP12Q02952 1782 aa25.22■■□□□ 1.63
REPIN1-216ENST00000518462 CD163L1Q9NR16 1453 aa25.21■■□□□ 1.63
REPIN1-216ENST00000518462 NRKQ7Z2Y5 1582 aa25.19■■□□□ 1.62
REPIN1-216ENST00000518462 NUTM2BA6NNL0 878 aaPredicted RBP25.19■■□□□ 1.62
REPIN1-216ENST00000518462 NUTM2EB1AL46 878 aaPredicted RBP25.19■■□□□ 1.62
REPIN1-216ENST00000518462 HSPA5P11021 654 aaKnown RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms