RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 PREX2Q70Z35 1606 aa9.42□□□□□ -0.9
MRPS28-203ENST00000518371 ARHGEF12Q9NZN5 1544 aa9.42□□□□□ -0.9
MRPS28-203ENST00000518371 PLEKHH2Q8IVE3 1493 aa9.42□□□□□ -0.9
MRPS28-203ENST00000518371 YEATS2Q9ULM3 1422 aa9.42□□□□□ -0.9
MRPS28-203ENST00000518371 KIAA1107Q9UPP5 1409 aa9.42□□□□□ -0.9
MRPS28-203ENST00000518371 RSPH4AQ5TD94 716 aa9.42□□□□□ -0.9
MRPS28-203ENST00000518371 FRMPD1Q5SYB0 1578 aa9.41□□□□□ -0.9
MRPS28-203ENST00000518371 TSPY4P0CV99 314 aa9.41□□□□□ -0.9
MRPS28-203ENST00000518371 TSPY10P0CW01 314 aa9.41□□□□□ -0.9
MRPS28-203ENST00000518371 PPARGC1BQ86YN6 1023 aaKnown RBP9.41□□□□□ -0.9
MRPS28-203ENST00000518371 EMILIN3Q9NT22 766 aa9.41□□□□□ -0.9
MRPS28-203ENST00000518371 SUPT6HQ7KZ85 1726 aaKnown RBP9.41□□□□□ -0.9
MRPS28-203ENST00000518371 ZFYVE16Q7Z3T8 1539 aa9.41□□□□□ -0.9
MRPS28-203ENST00000518371 ATP10AO60312 1499 aa9.4□□□□□ -0.9
MRPS28-203ENST00000518371 CDC42BPAQ5VT25 1732 aa9.4□□□□□ -0.9
MRPS28-203ENST00000518371 RICTORQ6R327 1708 aa9.4□□□□□ -0.9
MRPS28-203ENST00000518371 ABCC1P33527 1531 aa9.4□□□□□ -0.91
MRPS28-203ENST00000518371 ZMYM4Q5VZL5 1548 aa9.4□□□□□ -0.91
MRPS28-203ENST00000518371 SAMD9LQ8IVG5 1584 aa9.39□□□□□ -0.91
MRPS28-203ENST00000518371 GFRA3O60609 400 aa9.39□□□□□ -0.91
MRPS28-203ENST00000518371 SYCP2Q9BX26 1530 aa9.39□□□□□ -0.91
MRPS28-203ENST00000518371 MLH3Q9UHC1 1453 aa9.39□□□□□ -0.91
MRPS28-203ENST00000518371 MYOM3Q5VTT5 1437 aa9.39□□□□□ -0.91
MRPS28-203ENST00000518371 KCNC4Q03721 635 aa9.38□□□□□ -0.91
MRPS28-203ENST00000518371 SPRYD3Q8NCJ5 442 aa9.38□□□□□ -0.91
MRPS28-203ENST00000518371 ANKK1Q8NFD2 765 aa9.38□□□□□ -0.91
MRPS28-203ENST00000518371 ANO8Q9HCE9 1232 aaPredicted RBP9.38□□□□□ -0.91
MRPS28-203ENST00000518371 C9orf84Q5VXU9 1444 aa9.38□□□□□ -0.91
MRPS28-203ENST00000518371 MIA2Q96PC5 1412 aa9.38□□□□□ -0.91
MRPS28-203ENST00000518371 EVI5O60447 810 aa9.37□□□□□ -0.91
MRPS28-203ENST00000518371 ESF1Q9H501 851 aaKnown RBP9.37□□□□□ -0.91
MRPS28-203ENST00000518371 ARHGEF40Q8TER5 1519 aa9.36□□□□□ -0.91
MRPS28-203ENST00000518371 ITSN2Q9NZM3 1697 aa9.36□□□□□ -0.91
MRPS28-203ENST00000518371 CAMSAP2Q08AD1 1489 aa9.36□□□□□ -0.91
MRPS28-203ENST00000518371 MBD5Q9P267 1494 aa9.36□□□□□ -0.91
MRPS28-203ENST00000518371 FAM50AQ14320 339 aaKnown RBP9.36□□□□□ -0.91
MRPS28-203ENST00000518371 KDM5CP41229 1560 aa9.36□□□□□ -0.91
MRPS28-203ENST00000518371 NYAP1Q6ZVC0 841 aa9.35□□□□□ -0.91
MRPS28-203ENST00000518371 ADAM33Q9BZ11 813 aa9.35□□□□□ -0.91
MRPS28-203ENST00000518371 HECW2Q9P2P5 1572 aa9.34□□□□□ -0.91
MRPS28-203ENST00000518371 BCAMP50895 628 aa9.34□□□□□ -0.91
MRPS28-203ENST00000518371 GGT6Q6P531 493 aa9.34□□□□□ -0.91
MRPS28-203ENST00000518371 ZDHHC16Q969W1 377 aa9.34□□□□□ -0.91
MRPS28-203ENST00000518371 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.34□□□□□ -0.91
MRPS28-203ENST00000518371 RABGEF1Q9UJ41 708 aa9.34□□□□□ -0.91
MRPS28-203ENST00000518371 CCDC141Q6ZP82 1450 aa9.34□□□□□ -0.91
MRPS28-203ENST00000518371 RTEL1-TNFRSF6BF6WH68 1400 aa9.33□□□□□ -0.92
MRPS28-203ENST00000518371 SOWAHBA6NEL2 793 aa9.33□□□□□ -0.92
MRPS28-203ENST00000518371 MAP3K9P80192 1104 aa9.33□□□□□ -0.92
MRPS28-203ENST00000518371 FGD6Q6ZV73 1430 aa9.32□□□□□ -0.92
MRPS28-203ENST00000518371 ATP7AQ04656 1500 aa9.32□□□□□ -0.92
MRPS28-203ENST00000518371 KIF3BO15066 747 aa9.32□□□□□ -0.92
MRPS28-203ENST00000518371 CAMK2BQ13554 666 aa9.32□□□□□ -0.92
MRPS28-203ENST00000518371 CHIC2Q9UKJ5 165 aa9.32□□□□□ -0.92
MRPS28-203ENST00000518371 DHX29Q7Z478 1369 aaKnown RBP9.32□□□□□ -0.92
MRPS28-203ENST00000518371 DIP2CQ9Y2E4 1556 aa9.32□□□□□ -0.92
MRPS28-203ENST00000518371 CEBPAP49715 358 aaPredicted RBP9.31□□□□□ -0.92
MRPS28-203ENST00000518371 A2MP01023 1474 aa9.31□□□□□ -0.92
MRPS28-203ENST00000518371 KIDINS220Q9ULH0 1771 aa9.3□□□□□ -0.92
MRPS28-203ENST00000518371 PTPRMP28827 1452 aa9.3□□□□□ -0.92
MRPS28-203ENST00000518371 PAXIP1Q6ZW49 1069 aaPredicted RBP9.3□□□□□ -0.92
MRPS28-203ENST00000518371 RRP7BPQ9NSQ0 103 aa9.3□□□□□ -0.92
MRPS28-203ENST00000518371 WBP1LQ9NX94 342 aa9.3□□□□□ -0.92
MRPS28-203ENST00000518371 BCORL1Q5H9F3 1711 aa9.3□□□□□ -0.92
MRPS28-203ENST00000518371 ABCA6Q8N139 1617 aa9.3□□□□□ -0.92
MRPS28-203ENST00000518371 ARHGEF5Q12774 1597 aa9.29□□□□□ -0.92
MRPS28-203ENST00000518371 ITGAEP38570 1179 aa9.29□□□□□ -0.92
MRPS28-203ENST00000518371 LAPTM4BQ86VI4 370 aa9.29□□□□□ -0.92
MRPS28-203ENST00000518371 CFAP44Q96MT7 982 aa9.29□□□□□ -0.92
MRPS28-203ENST00000518371 AGLP35573 1532 aa9.29□□□□□ -0.92
MRPS28-203ENST00000518371 ABCC5O15440 1437 aa9.29□□□□□ -0.92
MRPS28-203ENST00000518371 ADAMTSL3P82987 1691 aa9.29□□□□□ -0.92
MRPS28-203ENST00000518371 PTPN23Q9H3S7 1636 aa9.28□□□□□ -0.92
MRPS28-203ENST00000518371 PROX2Q3B8N5 592 aa9.28□□□□□ -0.92
MRPS28-203ENST00000518371 ZNF787Q6DD87 383 aa9.28□□□□□ -0.92
MRPS28-203ENST00000518371 REREQ9P2R6 1566 aa9.28□□□□□ -0.92
MRPS28-203ENST00000518371 TCOF1Q13428 1488 aaKnown RBP9.28□□□□□ -0.92
MRPS28-203ENST00000518371 MADDQ8WXG6 1647 aa9.27□□□□□ -0.92
MRPS28-203ENST00000518371 PPP1R3GB7ZBB8 358 aa9.27□□□□□ -0.93
MRPS28-203ENST00000518371 NRG2O14511 850 aaPredicted RBP9.27□□□□□ -0.93
MRPS28-203ENST00000518371 DPYSL4O14531 572 aa9.27□□□□□ -0.93
MRPS28-203ENST00000518371 DAPK1P53355 1430 aa9.27□□□□□ -0.93
MRPS28-203ENST00000518371 INO80Q9ULG1 1556 aaPredicted RBP9.27□□□□□ -0.93
MRPS28-203ENST00000518371 ANKRD30AQ9BXX3 1397 aa9.26□□□□□ -0.93
MRPS28-203ENST00000518371 SIGLEC1Q9BZZ2 1709 aa9.26□□□□□ -0.93
MRPS28-203ENST00000518371 ZFRQ96KR1 1074 aaKnown RBP9.26□□□□□ -0.93
MRPS28-203ENST00000518371 PCDHGA10Q9Y5H3 936 aa9.26□□□□□ -0.93
MRPS28-203ENST00000518371 WASHC2CQ9Y4E1 1318 aa9.26□□□□□ -0.93
MRPS28-203ENST00000518371 CNTLNQ9NXG0 1405 aa9.25□□□□□ -0.93
MRPS28-203ENST00000518371 RIMS1Q86UR5 1692 aaKnown RBP9.25□□□□□ -0.93
MRPS28-203ENST00000518371 ZMYM3Q14202 1370 aa9.24□□□□□ -0.93
MRPS28-203ENST00000518371 KIF15Q9NS87 1388 aa9.24□□□□□ -0.93
MRPS28-203ENST00000518371 ZNF775Q96BV0 537 aaPredicted RBP9.24□□□□□ -0.93
MRPS28-203ENST00000518371 COL9A1P20849 921 aa9.23□□□□□ -0.93
MRPS28-203ENST00000518371 MAST1Q9Y2H9 1570 aa9.23□□□□□ -0.93
MRPS28-203ENST00000518371 ADGBQ8N7X0 1667 aa9.23□□□□□ -0.93
MRPS28-203ENST00000518371 NCOA1Q15788 1441 aa9.22□□□□□ -0.93
MRPS28-203ENST00000518371 SHANK2Q9UPX8 1470 aa9.22□□□□□ -0.93
MRPS28-203ENST00000518371 PRKD2Q9BZL6 878 aa9.22□□□□□ -0.93
MRPS28-203ENST00000518371 KIAA1468Q9P260 1216 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms