RNA–Protein interactions for RNA: ENST00000518081.1

EFCAB13-204, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-204ENST00000518081 MTMR2Q13614 643 aa12.86□□□□□ -0.35
EFCAB13-204ENST00000518081 TMEM259Q4ZIN3 620 aa12.86□□□□□ -0.35
EFCAB13-204ENST00000518081 SYMPKQ92797 1274 aaKnown RBP12.86□□□□□ -0.35
EFCAB13-204ENST00000518081 PCDHB3Q9Y5E6 796 aa12.86□□□□□ -0.35
EFCAB13-204ENST00000518081 C6orf229H3BNL8 230 aa12.85□□□□□ -0.35
EFCAB13-204ENST00000518081 BANK1Q8NDB2 785 aa12.84□□□□□ -0.35
EFCAB13-204ENST00000518081 PCDH10Q9P2E7 1040 aa12.84□□□□□ -0.35
EFCAB13-204ENST00000518081 MYT1LQ9UL68 1186 aa12.84□□□□□ -0.35
EFCAB13-204ENST00000518081 PTPN5P54829 565 aa12.83□□□□□ -0.36
EFCAB13-204ENST00000518081 MCM6Q14566 821 aa12.82□□□□□ -0.36
EFCAB13-204ENST00000518081 BLOC1S3Q6QNY0 202 aa12.82□□□□□ -0.36
EFCAB13-204ENST00000518081 SCUBE3Q8IX30 993 aa12.82□□□□□ -0.36
EFCAB13-204ENST00000518081 SPDYE5A6NIY4 337 aa12.81□□□□□ -0.36
EFCAB13-204ENST00000518081 AP1G2O75843 785 aa12.81□□□□□ -0.36
EFCAB13-204ENST00000518081 Q3C1V9 767 aa12.81□□□□□ -0.36
EFCAB13-204ENST00000518081 SNRKQ9NRH2 765 aa12.81□□□□□ -0.36
EFCAB13-204ENST00000518081 NR1I2O75469 434 aa12.8□□□□□ -0.36
EFCAB13-204ENST00000518081 NYAP1Q6ZVC0 841 aa12.8□□□□□ -0.36
EFCAB13-204ENST00000518081 CFAP99D6REC4 459 aa12.79□□□□□ -0.36
EFCAB13-204ENST00000518081 RNF19BQ6ZMZ0 732 aa12.79□□□□□ -0.36
EFCAB13-204ENST00000518081 BRICD5Q6PL45 260 aa12.78□□□□□ -0.36
EFCAB13-204ENST00000518081 RETREG3Q86VR2 466 aa12.78□□□□□ -0.36
EFCAB13-204ENST00000518081 ZMYND15Q9H091 742 aa12.78□□□□□ -0.36
EFCAB13-204ENST00000518081 SALL2Q9Y467 1007 aaPredicted RBP12.78□□□□□ -0.36
EFCAB13-204ENST00000518081 COPS2P61201 443 aa12.77□□□□□ -0.37
EFCAB13-204ENST00000518081 PRR7Q8TB68 274 aa12.77□□□□□ -0.37
EFCAB13-204ENST00000518081 THAP11Q96EK4 314 aa12.77□□□□□ -0.37
EFCAB13-204ENST00000518081 SPNS2Q8IVW8 549 aa12.76□□□□□ -0.37
EFCAB13-204ENST00000518081 FMNL1O95466 1100 aaPredicted RBP12.75□□□□□ -0.37
EFCAB13-204ENST00000518081 CTDSPL2Q05D32 466 aa12.75□□□□□ -0.37
EFCAB13-204ENST00000518081 USP17L8P0C7I0 530 aa12.74□□□□□ -0.37
EFCAB13-204ENST00000518081 TSC1Q92574 1164 aa12.74□□□□□ -0.37
EFCAB13-204ENST00000518081 USB1Q9BQ65 265 aaKnown RBP12.74□□□□□ -0.37
EFCAB13-204ENST00000518081 UBTFP17480 764 aaKnown RBP12.73□□□□□ -0.37
EFCAB13-204ENST00000518081 HELBQ8NG08 1087 aaPredicted RBP12.73□□□□□ -0.37
EFCAB13-204ENST00000518081 MTMR14Q8NCE2 650 aa12.72□□□□□ -0.37
EFCAB13-204ENST00000518081 MTRQ99707 1265 aa12.72□□□□□ -0.37
EFCAB13-204ENST00000518081 TJAP1Q5JTD0 557 aa12.7□□□□□ -0.38
EFCAB13-204ENST00000518081 RNF166Q96A37 237 aaPredicted RBP12.7□□□□□ -0.38
EFCAB13-204ENST00000518081 CLUAP1Q96AJ1 413 aa12.7□□□□□ -0.38
EFCAB13-204ENST00000518081 ZPR1O75312 459 aa12.69□□□□□ -0.38
EFCAB13-204ENST00000518081 DESI1Q6ICB0 168 aa12.69□□□□□ -0.38
EFCAB13-204ENST00000518081 LRRN4Q8WUT4 740 aa12.68□□□□□ -0.38
EFCAB13-204ENST00000518081 ZNF516Q92618 1163 aa12.68□□□□□ -0.38
EFCAB13-204ENST00000518081 POM121Q96HA1 1249 aa12.68□□□□□ -0.38
EFCAB13-204ENST00000518081 SPSB2Q99619 263 aa12.68□□□□□ -0.38
EFCAB13-204ENST00000518081 SOCS7O14512 581 aa12.67□□□□□ -0.38
EFCAB13-204ENST00000518081 FAM160A2Q8N612 972 aaPredicted RBP12.67□□□□□ -0.38
EFCAB13-204ENST00000518081 IL21Q9HBE4 155 aa12.67□□□□□ -0.38
EFCAB13-204ENST00000518081 HCSTQ9UBK5 93 aa12.67□□□□□ -0.38
EFCAB13-204ENST00000518081 A6NJR5 290 aa12.66□□□□□ -0.38
EFCAB13-204ENST00000518081 PER1O15534 1290 aaPredicted RBP12.66□□□□□ -0.38
EFCAB13-204ENST00000518081 HMX1Q9NP08 348 aaPredicted RBP12.66□□□□□ -0.38
EFCAB13-204ENST00000518081 TLL1O43897 1013 aa12.65□□□□□ -0.38
EFCAB13-204ENST00000518081 LYPD8Q6UX82 237 aa12.65□□□□□ -0.38
EFCAB13-204ENST00000518081 GJD4Q96KN9 370 aaPredicted RBP12.65□□□□□ -0.38
EFCAB13-204ENST00000518081 COG6Q9Y2V7 657 aa12.65□□□□□ -0.38
EFCAB13-204ENST00000518081 RAD21O60216 631 aa12.64□□□□□ -0.39
EFCAB13-204ENST00000518081 MSS51Q4VC12 460 aa12.64□□□□□ -0.39
EFCAB13-204ENST00000518081 ADH1BP00325 375 aa12.63□□□□□ -0.39
EFCAB13-204ENST00000518081 JUNDP17535 347 aa12.63□□□□□ -0.39
EFCAB13-204ENST00000518081 APBB1O00213 710 aa12.62□□□□□ -0.39
EFCAB13-204ENST00000518081 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
EFCAB13-204ENST00000518081 TRIM34Q9BYJ4 488 aa12.62□□□□□ -0.39
EFCAB13-204ENST00000518081 GDPD2Q9HCC8 539 aa12.61□□□□□ -0.39
EFCAB13-204ENST00000518081 PRDM9Q9NQV7 894 aa12.6□□□□□ -0.39
EFCAB13-204ENST00000518081 DXOO77932 396 aaKnown RBP12.59□□□□□ -0.39
EFCAB13-204ENST00000518081 MMP16P51512 607 aa12.59□□□□□ -0.39
EFCAB13-204ENST00000518081 NKX2-3Q8TAU0 364 aa12.59□□□□□ -0.39
EFCAB13-204ENST00000518081 EPS8L1Q8TE68 723 aa12.59□□□□□ -0.39
EFCAB13-204ENST00000518081 PRM3Q9NNZ6 103 aa12.59□□□□□ -0.39
EFCAB13-204ENST00000518081 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
EFCAB13-204ENST00000518081 NR6A1Q15406 480 aa12.58□□□□□ -0.4
EFCAB13-204ENST00000518081 TRAK2O60296 914 aa12.57□□□□□ -0.4
EFCAB13-204ENST00000518081 MMRN1Q13201 1228 aa12.57□□□□□ -0.4
EFCAB13-204ENST00000518081 PTPRNQ16849 979 aa12.57□□□□□ -0.4
EFCAB13-204ENST00000518081 PROSER2Q86WR7 435 aaPredicted RBP12.57□□□□□ -0.4
EFCAB13-204ENST00000518081 FNBP4Q8N3X1 1017 aaPredicted RBP12.57□□□□□ -0.4
EFCAB13-204ENST00000518081 NDUFB9Q9Y6M9 179 aa12.57□□□□□ -0.4
EFCAB13-204ENST00000518081 SLC6A16Q9GZN6 736 aa12.56□□□□□ -0.4
EFCAB13-204ENST00000518081 ABL2P42684 1182 aa12.55□□□□□ -0.4
EFCAB13-204ENST00000518081 F12P00748 615 aaPredicted RBP12.54□□□□□ -0.4
EFCAB13-204ENST00000518081 KCNC4Q03721 635 aa12.54□□□□□ -0.4
EFCAB13-204ENST00000518081 ITGBL1O95965 494 aaPredicted RBP12.53□□□□□ -0.4
EFCAB13-204ENST00000518081 GPR37L1O60883 481 aa12.52□□□□□ -0.41
EFCAB13-204ENST00000518081 CCNYL3P0C7X3 344 aa12.52□□□□□ -0.41
EFCAB13-204ENST00000518081 NUDT12Q9BQG2 462 aa12.52□□□□□ -0.41
EFCAB13-204ENST00000518081 EVA1BQ9NVM1 165 aa12.52□□□□□ -0.41
EFCAB13-204ENST00000518081 MAP10Q9P2G4 905 aa12.52□□□□□ -0.41
EFCAB13-204ENST00000518081 S1PR4O95977 384 aa12.51□□□□□ -0.41
EFCAB13-204ENST00000518081 CTHP32929 405 aa12.5□□□□□ -0.41
EFCAB13-204ENST00000518081 IRF5Q13568 498 aa12.5□□□□□ -0.41
EFCAB13-204ENST00000518081 KCNH2Q12809 1159 aa12.49□□□□□ -0.41
EFCAB13-204ENST00000518081 ZNF330Q9Y3S2 320 aaPredicted RBP12.48□□□□□ -0.41
EFCAB13-204ENST00000518081 ARID3CA6NKF2 412 aa12.47□□□□□ -0.41
EFCAB13-204ENST00000518081 WWC1Q8IX03 1113 aa12.47□□□□□ -0.41
EFCAB13-204ENST00000518081 CCDC24Q8N4L8 307 aa12.47□□□□□ -0.41
EFCAB13-204ENST00000518081 ZNF777Q9ULD5 760 aaPredicted RBP12.47□□□□□ -0.41
EFCAB13-204ENST00000518081 PTCRAQ6ISU1 281 aaPredicted RBP12.45□□□□□ -0.42
EFCAB13-204ENST00000518081 C1orf115Q9H7X2 142 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms