RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 USP32Q8NFA0 1604 aa14.46□□□□□ -0.09
SPIDR-204ENST00000517824 NPHP4O75161 1426 aaPredicted RBP14.45□□□□□ -0.1
SPIDR-204ENST00000517824 ZFYVE9O95405 1425 aa14.45□□□□□ -0.1
SPIDR-204ENST00000517824 PIP4K2BP78356 416 aa14.45□□□□□ -0.1
SPIDR-204ENST00000517824 TOM1O60784 492 aa14.44□□□□□ -0.1
SPIDR-204ENST00000517824 BCANQ96GW7 911 aa14.44□□□□□ -0.1
SPIDR-204ENST00000517824 C14orf93Q9H972 538 aaKnown RBP14.43□□□□□ -0.1
SPIDR-204ENST00000517824 SMG6Q86US8 1419 aaKnown RBP14.42□□□□□ -0.1
SPIDR-204ENST00000517824 ALKQ9UM73 1620 aa14.42□□□□□ -0.1
SPIDR-204ENST00000517824 POTEDQ86YR6 584 aa14.42□□□□□ -0.1
SPIDR-204ENST00000517824 TRAK1Q9UPV9 953 aa14.42□□□□□ -0.1
SPIDR-204ENST00000517824 LRPPRCP42704 1394 aaKnown RBP14.42□□□□□ -0.1
SPIDR-204ENST00000517824 ANKRD26Q9UPS8 1709 aa14.41□□□□□ -0.1
SPIDR-204ENST00000517824 PNISRQ8TF01 805 aaKnown RBP14.41□□□□□ -0.1
SPIDR-204ENST00000517824 KIF20BQ96Q89 1820 aa14.41□□□□□ -0.1
SPIDR-204ENST00000517824 NPC1L1Q9UHC9 1359 aa14.4□□□□□ -0.1
SPIDR-204ENST00000517824 WDR43Q15061 677 aaKnown RBP eCLIP14.4□□□□□ -0.1
SPIDR-204ENST00000517824 INSRP06213 1382 aa14.39□□□□□ -0.11
SPIDR-204ENST00000517824 PER1O15534 1290 aaPredicted RBP14.39□□□□□ -0.11
SPIDR-204ENST00000517824 IDI1Q13907 227 aa14.39□□□□□ -0.11
SPIDR-204ENST00000517824 EVC2Q86UK5 1308 aa14.39□□□□□ -0.11
SPIDR-204ENST00000517824 MED1Q15648 1581 aaPredicted RBP14.39□□□□□ -0.11
SPIDR-204ENST00000517824 KNDC1Q76NI1 1749 aa14.38□□□□□ -0.11
SPIDR-204ENST00000517824 NUTM2DQ5VT03 806 aaPredicted RBP14.38□□□□□ -0.11
SPIDR-204ENST00000517824 SETD1AO15047 1707 aaKnown RBP14.38□□□□□ -0.11
SPIDR-204ENST00000517824 LRRC7Q96NW7 1537 aa14.37□□□□□ -0.11
SPIDR-204ENST00000517824 NUDCQ9Y266 331 aa14.37□□□□□ -0.11
SPIDR-204ENST00000517824 BLMP54132 1417 aaPredicted RBP14.37□□□□□ -0.11
SPIDR-204ENST00000517824 UBR1Q8IWV7 1749 aa14.37□□□□□ -0.11
SPIDR-204ENST00000517824 TULP4Q9NRJ4 1543 aa14.36□□□□□ -0.11
SPIDR-204ENST00000517824 LTKP29376 864 aa14.36□□□□□ -0.11
SPIDR-204ENST00000517824 ERICH6BQ5W0A0 696 aa14.36□□□□□ -0.11
SPIDR-204ENST00000517824 STRCP1A6NGW2 1772 aa14.36□□□□□ -0.11
SPIDR-204ENST00000517824 RIMS2Q9UQ26 1411 aa14.35□□□□□ -0.11
SPIDR-204ENST00000517824 KCNA4P22459 653 aa14.35□□□□□ -0.11
SPIDR-204ENST00000517824 TMEM132EQ6IEE7 984 aa14.35□□□□□ -0.11
SPIDR-204ENST00000517824 ITSN1Q15811 1721 aa14.35□□□□□ -0.11
SPIDR-204ENST00000517824 NINLQ9Y2I6 1382 aa14.34□□□□□ -0.11
SPIDR-204ENST00000517824 NSD3Q9BZ95 1437 aa14.34□□□□□ -0.11
SPIDR-204ENST00000517824 YTHDC2Q9H6S0 1430 aaKnown RBP14.33□□□□□ -0.11
SPIDR-204ENST00000517824 ARHGAP23Q9P227 1491 aa14.33□□□□□ -0.12
SPIDR-204ENST00000517824 DLC1Q96QB1 1528 aa14.33□□□□□ -0.12
SPIDR-204ENST00000517824 PPP2R1AP30153 589 aa14.33□□□□□ -0.12
SPIDR-204ENST00000517824 NCBP3Q53F19 620 aaKnown RBP14.33□□□□□ -0.12
SPIDR-204ENST00000517824 POGKQ9P215 609 aa14.33□□□□□ -0.12
SPIDR-204ENST00000517824 PDE3BQ13370 1112 aa14.32□□□□□ -0.12
SPIDR-204ENST00000517824 AMER1Q5JTC6 1135 aaPredicted RBP14.32□□□□□ -0.12
SPIDR-204ENST00000517824 TXNDC2Q86VQ3 553 aa14.32□□□□□ -0.12
SPIDR-204ENST00000517824 SLIT1O75093 1534 aa14.31□□□□□ -0.12
SPIDR-204ENST00000517824 IRX6P78412 446 aaPredicted RBP14.31□□□□□ -0.12
SPIDR-204ENST00000517824 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.31□□□□□ -0.12
SPIDR-204ENST00000517824 STK26Q9P289 416 aa14.31□□□□□ -0.12
SPIDR-204ENST00000517824 ATAD2Q6PL18 1390 aa14.31□□□□□ -0.12
SPIDR-204ENST00000517824 HDGFP51858 240 aaKnown RBP14.3□□□□□ -0.12
SPIDR-204ENST00000517824 PUS7Q96PZ0 661 aaKnown RBP14.3□□□□□ -0.12
SPIDR-204ENST00000517824 NSD2O96028 1365 aa14.3□□□□□ -0.12
SPIDR-204ENST00000517824 SRPK2P78362 688 aaKnown RBP14.29□□□□□ -0.12
SPIDR-204ENST00000517824 CGNL1Q0VF96 1302 aa14.29□□□□□ -0.12
SPIDR-204ENST00000517824 ANKRD36BQ8N2N9 1353 aa14.29□□□□□ -0.12
SPIDR-204ENST00000517824 NRXN3Q9Y4C0 1643 aa14.29□□□□□ -0.12
SPIDR-204ENST00000517824 SHPRHQ149N8 1683 aa14.28□□□□□ -0.12
SPIDR-204ENST00000517824 MORC1Q86VD1 984 aa14.28□□□□□ -0.12
SPIDR-204ENST00000517824 PPP4R2Q9NY27 417 aa14.28□□□□□ -0.12
SPIDR-204ENST00000517824 TMEM2Q9UHN6 1383 aa14.27□□□□□ -0.12
SPIDR-204ENST00000517824 SAFB2Q14151 953 aaKnown RBP eCLIP14.27□□□□□ -0.13
SPIDR-204ENST00000517824 CFAP53Q96M91 514 aa14.26□□□□□ -0.13
SPIDR-204ENST00000517824 SALL2Q9Y467 1007 aaPredicted RBP14.26□□□□□ -0.13
SPIDR-204ENST00000517824 EID1Q9Y6B2 187 aa14.26□□□□□ -0.13
SPIDR-204ENST00000517824 SENP3-EIF4A1A0A087X0R7 540 aa14.25□□□□□ -0.13
SPIDR-204ENST00000517824 MINK1Q8N4C8 1332 aaPredicted RBP14.24□□□□□ -0.13
SPIDR-204ENST00000517824 PRAM1Q96QH2 718 aa14.24□□□□□ -0.13
SPIDR-204ENST00000517824 TERF2IPQ9NYB0 399 aa14.24□□□□□ -0.13
SPIDR-204ENST00000517824 AKAP12Q02952 1782 aa14.23□□□□□ -0.13
SPIDR-204ENST00000517824 XIRP1Q702N8 1843 aaKnown RBP14.22□□□□□ -0.13
SPIDR-204ENST00000517824 HDGFL2Q7Z4V5 671 aaPredicted RBP14.22□□□□□ -0.13
SPIDR-204ENST00000517824 SLC12A5Q9H2X9 1139 aa14.22□□□□□ -0.13
SPIDR-204ENST00000517824 RGS17Q9UGC6 210 aaPredicted RBP14.22□□□□□ -0.13
SPIDR-204ENST00000517824 MON2Q7Z3U7 1717 aa14.21□□□□□ -0.13
SPIDR-204ENST00000517824 SLC26A8Q96RN1 970 aa14.21□□□□□ -0.13
SPIDR-204ENST00000517824 CABP2Q9NPB3 220 aa14.21□□□□□ -0.13
SPIDR-204ENST00000517824 POLR3AO14802 1390 aaPredicted RBP14.21□□□□□ -0.14
SPIDR-204ENST00000517824 TMEM94Q12767 1356 aa14.21□□□□□ -0.14
SPIDR-204ENST00000517824 ATP7BP35670 1465 aa14.2□□□□□ -0.14
SPIDR-204ENST00000517824 KCNA6P17658 529 aa14.2□□□□□ -0.14
SPIDR-204ENST00000517824 CARD14Q9BXL6 1004 aa14.2□□□□□ -0.14
SPIDR-204ENST00000517824 RCAN3Q9UKA8 241 aa14.2□□□□□ -0.14
SPIDR-204ENST00000517824 ADAMTS8Q9UP79 889 aa14.2□□□□□ -0.14
SPIDR-204ENST00000517824 FAM135BQ49AJ0 1406 aa14.2□□□□□ -0.14
SPIDR-204ENST00000517824 DIP2AQ14689 1571 aa14.19□□□□□ -0.14
SPIDR-204ENST00000517824 RBM33Q96EV2 1170 aaKnown RBP14.19□□□□□ -0.14
SPIDR-204ENST00000517824 A0A1W2PP64 1363 aa14.19□□□□□ -0.14
SPIDR-204ENST00000517824 TNNT2P45379 298 aaPredicted RBP14.18□□□□□ -0.14
SPIDR-204ENST00000517824 NGEFQ8N5V2 710 aa14.18□□□□□ -0.14
SPIDR-204ENST00000517824 ABCC11Q96J66 1382 aa14.18□□□□□ -0.14
SPIDR-204ENST00000517824 MAP2P11137 1827 aaKnown RBP14.18□□□□□ -0.14
SPIDR-204ENST00000517824 ADGRB2O60241 1585 aa14.17□□□□□ -0.14
SPIDR-204ENST00000517824 PROSER2Q86WR7 435 aaPredicted RBP14.16□□□□□ -0.14
SPIDR-204ENST00000517824 CDC42BPGQ6DT37 1551 aa14.16□□□□□ -0.14
SPIDR-204ENST00000517824 TOPAZ1Q8N9V7 1692 aa14.15□□□□□ -0.14
SPIDR-204ENST00000517824 RRP1P56182 461 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms