RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 WDR43Q15061 677 aaKnown RBP eCLIP35.47■■■■□ 3.27
COL13A1-210ENST00000517713 ANKRD36BQ8N2N9 1353 aa35.46■■■■□ 3.27
COL13A1-210ENST00000517713 HDGFP51858 240 aaKnown RBP35.45■■■■□ 3.27
COL13A1-210ENST00000517713 MINK1Q8N4C8 1332 aaPredicted RBP35.45■■■■□ 3.27
COL13A1-210ENST00000517713 DLC1Q96QB1 1528 aa35.44■■■■□ 3.26
COL13A1-210ENST00000517713 SRPK2P78362 688 aaKnown RBP35.44■■■■□ 3.26
COL13A1-210ENST00000517713 NRXN3Q9Y4C0 1643 aa35.43■■■■□ 3.26
COL13A1-210ENST00000517713 NINLQ9Y2I6 1382 aa35.43■■■■□ 3.26
COL13A1-210ENST00000517713 ERICH6BQ5W0A0 696 aa35.42■■■■□ 3.26
COL13A1-210ENST00000517713 SALL2Q9Y467 1007 aaPredicted RBP35.42■■■■□ 3.26
COL13A1-210ENST00000517713 UBR1Q8IWV7 1749 aa35.42■■■■□ 3.26
COL13A1-210ENST00000517713 PDE3BQ13370 1112 aa35.41■■■■□ 3.26
COL13A1-210ENST00000517713 CGNL1Q0VF96 1302 aa35.39■■■■□ 3.26
COL13A1-210ENST00000517713 ATAD2Q6PL18 1390 aa35.39■■■■□ 3.26
COL13A1-210ENST00000517713 MORC1Q86VD1 984 aa35.39■■■■□ 3.26
COL13A1-210ENST00000517713 ABCC11Q96J66 1382 aa35.37■■■■□ 3.25
COL13A1-210ENST00000517713 TMEM2Q9UHN6 1383 aa35.37■■■■□ 3.25
COL13A1-210ENST00000517713 NLRP1Q9C000 1473 aa35.34■■■■□ 3.25
COL13A1-210ENST00000517713 CEBPAP49715 358 aaPredicted RBP35.32■■■■□ 3.25
COL13A1-210ENST00000517713 CDK19Q9BWU1 502 aa35.32■■■■□ 3.25
COL13A1-210ENST00000517713 METP08581 1390 aa35.32■■■■□ 3.24
COL13A1-210ENST00000517713 NSD2O96028 1365 aa35.31■■■■□ 3.24
COL13A1-210ENST00000517713 RNF123Q5XPI4 1314 aa35.31■■■■□ 3.24
COL13A1-210ENST00000517713 WAPLQ7Z5K2 1190 aa35.31■■■■□ 3.24
COL13A1-210ENST00000517713 C3P01024 1663 aa35.31■■■■□ 3.24
COL13A1-210ENST00000517713 A0A1W2PP64 1363 aa35.3■■■■□ 3.24
COL13A1-210ENST00000517713 POLR3AO14802 1390 aaPredicted RBP35.3■■■■□ 3.24
COL13A1-210ENST00000517713 FER1L4A9Z1Z3 1794 aa35.29■■■■□ 3.24
COL13A1-210ENST00000517713 PLEKHH1Q9ULM0 1364 aa35.28■■■■□ 3.24
COL13A1-210ENST00000517713 TERF2IPQ9NYB0 399 aa35.27■■■■□ 3.24
COL13A1-210ENST00000517713 TNNT2P45379 298 aaPredicted RBP35.25■■■■□ 3.23
COL13A1-210ENST00000517713 KNDC1Q76NI1 1749 aa35.23■■■■□ 3.23
COL13A1-210ENST00000517713 CD163L1Q9NR16 1453 aa35.23■■■■□ 3.23
COL13A1-210ENST00000517713 CDCA7LQ96GN5 454 aa35.23■■■■□ 3.23
COL13A1-210ENST00000517713 PPP4R2Q9NY27 417 aa35.23■■■■□ 3.23
COL13A1-210ENST00000517713 SIRT1Q96EB6 747 aa35.21■■■■□ 3.23
COL13A1-210ENST00000517713 TECPR2O15040 1411 aa35.2■■■■□ 3.23
COL13A1-210ENST00000517713 TXNDC2Q86VQ3 553 aa35.19■■■■□ 3.22
COL13A1-210ENST00000517713 FAM135BQ49AJ0 1406 aa35.19■■■■□ 3.22
COL13A1-210ENST00000517713 HDGFL2Q7Z4V5 671 aaPredicted RBP35.18■■■■□ 3.22
COL13A1-210ENST00000517713 PLEKHG1Q9ULL1 1385 aa35.18■■■■□ 3.22
COL13A1-210ENST00000517713 LTKP29376 864 aa35.17■■■■□ 3.22
COL13A1-210ENST00000517713 CABP1Q9NZU7 370 aa35.17■■■■□ 3.22
COL13A1-210ENST00000517713 CCDC146Q8IYE0 955 aa35.16■■■■□ 3.22
COL13A1-210ENST00000517713 ADAMTS13Q76LX8 1427 aa35.16■■■■□ 3.22
COL13A1-210ENST00000517713 CPS1P31327 1500 aa35.16■■■■□ 3.22
COL13A1-210ENST00000517713 PLPPR3Q6T4P5 718 aa35.15■■■■□ 3.22
COL13A1-210ENST00000517713 MTHFSP49914 203 aa35.15■■■■□ 3.22
COL13A1-210ENST00000517713 RCAN3Q9UKA8 241 aa35.15■■■■□ 3.22
COL13A1-210ENST00000517713 SHPRHQ149N8 1683 aa35.14■■■■□ 3.22
COL13A1-210ENST00000517713 WASLO00401 505 aaPredicted RBP35.12■■■■□ 3.21
COL13A1-210ENST00000517713 EID1Q9Y6B2 187 aa35.12■■■■□ 3.21
COL13A1-210ENST00000517713 ZNF521Q96K83 1311 aa35.12■■■■□ 3.21
COL13A1-210ENST00000517713 CFAP53Q96M91 514 aa35.11■■■■□ 3.21
COL13A1-210ENST00000517713 SLIT1O75093 1534 aa35.11■■■■□ 3.21
COL13A1-210ENST00000517713 MED14O60244 1454 aa35.1■■■■□ 3.21
COL13A1-210ENST00000517713 ANKRD26Q9UPS8 1709 aa35.1■■■■□ 3.21
COL13A1-210ENST00000517713 ATP7BP35670 1465 aa35.09■■■■□ 3.21
COL13A1-210ENST00000517713 FYB1O15117 783 aa35.09■■■■□ 3.21
COL13A1-210ENST00000517713 GGNBP2Q9H3C7 697 aa35.09■■■■□ 3.21
COL13A1-210ENST00000517713 ARHGAP23Q9P227 1491 aa35.09■■■■□ 3.21
COL13A1-210ENST00000517713 APAF1O14727 1248 aa35.08■■■■□ 3.21
COL13A1-210ENST00000517713 RRP1P56182 461 aaKnown RBP35.05■■■■□ 3.2
COL13A1-210ENST00000517713 GOLGA2Q08379 1002 aa35.05■■■■□ 3.2
COL13A1-210ENST00000517713 THEMISQ8N1K5 641 aaPredicted RBP35.04■■■■□ 3.2
COL13A1-210ENST00000517713 NGEFQ8N5V2 710 aa35.04■■■■□ 3.2
COL13A1-210ENST00000517713 ROBO2Q9HCK4 1378 aa35.03■■■■□ 3.2
COL13A1-210ENST00000517713 KIF20BQ96Q89 1820 aa35.02■■■■□ 3.2
COL13A1-210ENST00000517713 PPIP5K1Q6PFW1 1433 aa35.01■■■■□ 3.19
COL13A1-210ENST00000517713 SLC26A8Q96RN1 970 aa34.99■■■■□ 3.19
COL13A1-210ENST00000517713 DUSP27Q5VZP5 1158 aa34.98■■■■□ 3.19
COL13A1-210ENST00000517713 NUDT16Q96DE0 195 aaKnown RBP34.98■■■■□ 3.19
COL13A1-210ENST00000517713 TSHZ2Q9NRE2 1034 aa34.98■■■■□ 3.19
COL13A1-210ENST00000517713 B4GALNT3Q6L9W6 998 aa34.97■■■■□ 3.19
COL13A1-210ENST00000517713 CPSF1Q10570 1443 aaKnown RBP34.97■■■■□ 3.19
COL13A1-210ENST00000517713 RUNDC1Q96C34 613 aa34.96■■■■□ 3.19
COL13A1-210ENST00000517713 SLFN5Q08AF3 891 aa34.95■■■■□ 3.19
COL13A1-210ENST00000517713 TBX22Q9Y458 520 aa34.94■■■■□ 3.18
COL13A1-210ENST00000517713 CCDC61Q9Y6R9 512 aa34.94■■■■□ 3.18
COL13A1-210ENST00000517713 PTPRUQ92729 1446 aa34.94■■■■□ 3.18
COL13A1-210ENST00000517713 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.93■■■■□ 3.18
COL13A1-210ENST00000517713 ADGRB2O60241 1585 aa34.93■■■■□ 3.18
COL13A1-210ENST00000517713 RIMS1Q86UR5 1692 aaKnown RBP34.93■■■■□ 3.18
COL13A1-210ENST00000517713 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.92■■■■□ 3.18
COL13A1-210ENST00000517713 EDC4Q6P2E9 1401 aaKnown RBP34.92■■■■□ 3.18
COL13A1-210ENST00000517713 CDC42BPGQ6DT37 1551 aa34.91■■■■□ 3.18
COL13A1-210ENST00000517713 TRMT2AQ8IZ69 625 aaKnown RBP34.91■■■■□ 3.18
COL13A1-210ENST00000517713 DIP2AQ14689 1571 aa34.89■■■■□ 3.18
COL13A1-210ENST00000517713 CEP170BQ9Y4F5 1589 aaPredicted RBP34.88■■■■□ 3.17
COL13A1-210ENST00000517713 COL3A1P02461 1466 aaPredicted RBP34.88■■■■□ 3.17
COL13A1-210ENST00000517713 IQSEC2Q5JU85 1478 aa34.88■■■■□ 3.17
COL13A1-210ENST00000517713 NCKAP5LQ9HCH0 1330 aa34.87■■■■□ 3.17
COL13A1-210ENST00000517713 U2AF1L5P0DN76 240 aaPredicted RBP34.87■■■■□ 3.17
COL13A1-210ENST00000517713 U2AF1Q01081 240 aaKnown RBP eCLIP34.87■■■■□ 3.17
COL13A1-210ENST00000517713 AMOTL2Q9Y2J4 779 aa34.87■■■■□ 3.17
COL13A1-210ENST00000517713 PRR36Q9H6K5 1346 aa34.86■■■■□ 3.17
COL13A1-210ENST00000517713 E9PSI1 815 aa34.86■■■■□ 3.17
COL13A1-210ENST00000517713 TCP11L2Q8N4U5 519 aa34.85■■■■□ 3.17
COL13A1-210ENST00000517713 WWC1Q8IX03 1113 aa34.84■■■■□ 3.17
COL13A1-210ENST00000517713 SPINK5Q9NQ38 1064 aaPredicted RBP34.84■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms