RNA–Protein interactions for RNA: ENST00000517684.2

RNF139-202, Transcript of ring finger protein 139, humanhuman

TSL 3

Gene RNF139, Length 467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-202ENST00000517684 IRX2Q9BZI1 471 aaPredicted RBP9.79□□□□□ -0.84
RNF139-202ENST00000517684 FDX1P10109 184 aa9.78□□□□□ -0.84
RNF139-202ENST00000517684 USB1Q9BQ65 265 aaKnown RBP9.78□□□□□ -0.84
RNF139-202ENST00000517684 PRDM9Q9NQV7 894 aa9.78□□□□□ -0.84
RNF139-202ENST00000517684 MOXD2PA6NHM9 499 aa9.77□□□□□ -0.85
RNF139-202ENST00000517684 NDUFV2P19404 249 aa9.77□□□□□ -0.85
RNF139-202ENST00000517684 DIXDC1Q155Q3 683 aa9.77□□□□□ -0.85
RNF139-202ENST00000517684 MSS51Q4VC12 460 aa9.77□□□□□ -0.85
RNF139-202ENST00000517684 SLC19A1P41440 591 aa9.76□□□□□ -0.85
RNF139-202ENST00000517684 SYMPKQ92797 1274 aaKnown RBP9.76□□□□□ -0.85
RNF139-202ENST00000517684 TBC1D2Q9BYX2 928 aa9.76□□□□□ -0.85
RNF139-202ENST00000517684 PCDHGC3Q9UN70 934 aa9.75□□□□□ -0.85
RNF139-202ENST00000517684 FCF1Q9Y324 198 aaKnown RBP9.75□□□□□ -0.85
RNF139-202ENST00000517684 C6orf229H3BNL8 230 aa9.74□□□□□ -0.85
RNF139-202ENST00000517684 EMID1Q96A84 441 aaPredicted RBP9.74□□□□□ -0.85
RNF139-202ENST00000517684 FAM117AQ9C073 453 aa9.74□□□□□ -0.85
RNF139-202ENST00000517684 PLA2G2CQ5R387 149 aa9.73□□□□□ -0.85
RNF139-202ENST00000517684 LIAT1Q6ZQX7 453 aa9.73□□□□□ -0.85
RNF139-202ENST00000517684 MMP16P51512 607 aa9.71□□□□□ -0.86
RNF139-202ENST00000517684 SPRYD7Q5W111 196 aa9.71□□□□□ -0.86
RNF139-202ENST00000517684 RETREG3Q86VR2 466 aa9.71□□□□□ -0.86
RNF139-202ENST00000517684 RSBN1LQ6PCB5 846 aaPredicted RBP9.7□□□□□ -0.86
RNF139-202ENST00000517684 GFRA3O60609 400 aa9.69□□□□□ -0.86
RNF139-202ENST00000517684 DXOO77932 396 aaKnown RBP9.69□□□□□ -0.86
RNF139-202ENST00000517684 RIC3Q7Z5B4 369 aa9.69□□□□□ -0.86
RNF139-202ENST00000517684 SPTLC1O15269 473 aa9.68□□□□□ -0.86
RNF139-202ENST00000517684 GJA5P36382 358 aa9.68□□□□□ -0.86
RNF139-202ENST00000517684 MTMR2Q13614 643 aa9.68□□□□□ -0.86
RNF139-202ENST00000517684 ZNF598Q86UK7 904 aaKnown RBP9.68□□□□□ -0.86
RNF139-202ENST00000517684 DDRGK1Q96HY6 314 aa9.68□□□□□ -0.86
RNF139-202ENST00000517684 TIMELESSQ9UNS1 1208 aa9.68□□□□□ -0.86
RNF139-202ENST00000517684 PCDHB15Q9Y5E8 787 aa9.68□□□□□ -0.86
RNF139-202ENST00000517684 ZBTB24O43167 697 aaPredicted RBP9.67□□□□□ -0.86
RNF139-202ENST00000517684 JUNDP17535 347 aa9.67□□□□□ -0.86
RNF139-202ENST00000517684 MYSM1Q5VVJ2 828 aa9.67□□□□□ -0.86
RNF139-202ENST00000517684 CCDC24Q8N4L8 307 aa9.67□□□□□ -0.86
RNF139-202ENST00000517684 PLEKHG3A1L390 1219 aa9.66□□□□□ -0.86
RNF139-202ENST00000517684 SPDYE5A6NIY4 337 aa9.66□□□□□ -0.86
RNF139-202ENST00000517684 CD2BP2O95400 341 aaKnown RBP9.66□□□□□ -0.86
RNF139-202ENST00000517684 RPIAP49247 311 aa9.66□□□□□ -0.86
RNF139-202ENST00000517684 LAPTM4AQ15012 233 aa9.66□□□□□ -0.86
RNF139-202ENST00000517684 CSPP1Q1MSJ5 1256 aa9.66□□□□□ -0.86
RNF139-202ENST00000517684 ZNF697Q5TEC3 545 aa9.66□□□□□ -0.86
RNF139-202ENST00000517684 RSPH6AQ9H0K4 717 aa9.66□□□□□ -0.86
RNF139-202ENST00000517684 PDZRN3Q9UPQ7 1066 aa9.66□□□□□ -0.86
RNF139-202ENST00000517684 PRR7Q8TB68 274 aa9.65□□□□□ -0.86
RNF139-202ENST00000517684 LIMD1Q9UGP4 676 aa9.64□□□□□ -0.87
RNF139-202ENST00000517684 HRCP23327 699 aa9.63□□□□□ -0.87
RNF139-202ENST00000517684 ZBTB3Q9H5J0 574 aa9.63□□□□□ -0.87
RNF139-202ENST00000517684 POLR3EQ9NVU0 708 aa9.63□□□□□ -0.87
RNF139-202ENST00000517684 Q6ZNB5 142 aa9.62□□□□□ -0.87
RNF139-202ENST00000517684 ERICH6Q7L0X2 663 aa9.62□□□□□ -0.87
RNF139-202ENST00000517684 CABLES1Q8TDN4 633 aa9.62□□□□□ -0.87
RNF139-202ENST00000517684 NUDT12Q9BQG2 462 aa9.62□□□□□ -0.87
RNF139-202ENST00000517684 NUTM2BA6NNL0 878 aaPredicted RBP9.61□□□□□ -0.87
RNF139-202ENST00000517684 NUTM2EB1AL46 878 aaPredicted RBP9.61□□□□□ -0.87
RNF139-202ENST00000517684 NRG2O14511 850 aaPredicted RBP9.61□□□□□ -0.87
RNF139-202ENST00000517684 CLK2P49760 499 aaKnown RBP9.61□□□□□ -0.87
RNF139-202ENST00000517684 NUTM2DQ5VT03 806 aaPredicted RBP9.61□□□□□ -0.87
RNF139-202ENST00000517684 PRPF38BQ5VTL8 546 aaKnown RBP9.61□□□□□ -0.87
RNF139-202ENST00000517684 TRIM67Q6ZTA4 783 aa9.61□□□□□ -0.87
RNF139-202ENST00000517684 C14orf37Q86TY3 774 aa9.61□□□□□ -0.87
RNF139-202ENST00000517684 NUTM2AQ8IVF1 878 aaPredicted RBP9.61□□□□□ -0.87
RNF139-202ENST00000517684 TNFRSF10AO00220 468 aa9.6□□□□□ -0.87
RNF139-202ENST00000517684 FOXC1Q12948 553 aa9.6□□□□□ -0.87
RNF139-202ENST00000517684 ATP1B4Q9UN42 357 aaPredicted RBP9.6□□□□□ -0.87
RNF139-202ENST00000517684 TRIM32Q13049 653 aa9.59□□□□□ -0.87
RNF139-202ENST00000517684 QPCTQ16769 361 aa9.59□□□□□ -0.87
RNF139-202ENST00000517684 TUSC1Q2TAM9 212 aa9.59□□□□□ -0.87
RNF139-202ENST00000517684 DESI1Q6ICB0 168 aa9.59□□□□□ -0.87
RNF139-202ENST00000517684 CFAP99D6REC4 459 aa9.58□□□□□ -0.88
RNF139-202ENST00000517684 GDF9O60383 454 aa9.58□□□□□ -0.88
RNF139-202ENST00000517684 CCNYL3P0C7X3 344 aa9.58□□□□□ -0.88
RNF139-202ENST00000517684 PTPRNQ16849 979 aa9.58□□□□□ -0.88
RNF139-202ENST00000517684 LILRB3O75022 631 aa9.57□□□□□ -0.88
RNF139-202ENST00000517684 PRR20EP86478 221 aa9.57□□□□□ -0.88
RNF139-202ENST00000517684 PRR20CP86479 221 aa9.57□□□□□ -0.88
RNF139-202ENST00000517684 PRR20DP86480 221 aa9.57□□□□□ -0.88
RNF139-202ENST00000517684 PRR20BP86481 221 aa9.57□□□□□ -0.88
RNF139-202ENST00000517684 PRR20AP86496 221 aa9.57□□□□□ -0.88
RNF139-202ENST00000517684 TSC1Q92574 1164 aa9.57□□□□□ -0.88
RNF139-202ENST00000517684 SKIV2LQ15477 1246 aaKnown RBP9.56□□□□□ -0.88
RNF139-202ENST00000517684 PTCRAQ6ISU1 281 aaPredicted RBP9.56□□□□□ -0.88
RNF139-202ENST00000517684 PKD2L1Q9P0L9 805 aa9.56□□□□□ -0.88
RNF139-202ENST00000517684 SH3D19Q5HYK7 790 aa9.55□□□□□ -0.88
RNF139-202ENST00000517684 EVA1BQ9NVM1 165 aa9.55□□□□□ -0.88
RNF139-202ENST00000517684 LCE2BO14633 110 aa9.54□□□□□ -0.88
RNF139-202ENST00000517684 RTL5Q5HYW3 569 aaPredicted RBP9.54□□□□□ -0.88
RNF139-202ENST00000517684 LYPD8Q6UX82 237 aa9.54□□□□□ -0.88
RNF139-202ENST00000517684 CTHP32929 405 aa9.53□□□□□ -0.88
RNF139-202ENST00000517684 KCNH2Q12809 1159 aa9.53□□□□□ -0.88
RNF139-202ENST00000517684 PROCA1Q8NCQ7 364 aaPredicted RBP9.53□□□□□ -0.88
RNF139-202ENST00000517684 PCMTD1Q96MG8 357 aaPredicted RBP9.53□□□□□ -0.88
RNF139-202ENST00000517684 GOPCQ9HD26 462 aa9.53□□□□□ -0.88
RNF139-202ENST00000517684 WNT7AO00755 349 aa9.51□□□□□ -0.89
RNF139-202ENST00000517684 PKDCCQ504Y2 493 aa9.51□□□□□ -0.89
RNF139-202ENST00000517684 TRAF7Q6Q0C0 670 aa9.51□□□□□ -0.89
RNF139-202ENST00000517684 CYP4X1Q8N118 509 aa9.51□□□□□ -0.89
RNF139-202ENST00000517684 HELBQ8NG08 1087 aaPredicted RBP9.51□□□□□ -0.89
RNF139-202ENST00000517684 UNC93B1Q9H1C4 597 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms