RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 GLI3P10071 1580 aa15.85■□□□□ 0.13
PDGFRB-203ENST00000517660 HRCP23327 699 aa15.85■□□□□ 0.13
PDGFRB-203ENST00000517660 ZNF326Q5BKZ1 582 aaKnown RBP15.84■□□□□ 0.13
PDGFRB-203ENST00000517660 GJD4Q96KN9 370 aaPredicted RBP15.84■□□□□ 0.13
PDGFRB-203ENST00000517660 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
PDGFRB-203ENST00000517660 METP08581 1390 aa15.84■□□□□ 0.13
PDGFRB-203ENST00000517660 PSDA5PKW4 1024 aaPredicted RBP15.83■□□□□ 0.12
PDGFRB-203ENST00000517660 RALGAPBQ86X10 1494 aa15.81■□□□□ 0.12
PDGFRB-203ENST00000517660 ORAI2Q96SN7 254 aa15.81■□□□□ 0.12
PDGFRB-203ENST00000517660 BRWD3Q6RI45 1802 aa15.8■□□□□ 0.12
PDGFRB-203ENST00000517660 SPHKAPQ2M3C7 1700 aa15.78■□□□□ 0.12
PDGFRB-203ENST00000517660 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.78■□□□□ 0.12
PDGFRB-203ENST00000517660 MARF1Q9Y4F3 1742 aaKnown RBP15.77■□□□□ 0.12
PDGFRB-203ENST00000517660 ACIN1Q9UKV3 1341 aaKnown RBP15.76■□□□□ 0.11
PDGFRB-203ENST00000517660 SLIT2O94813 1529 aa15.76■□□□□ 0.11
PDGFRB-203ENST00000517660 MPHOSPH9Q99550 1183 aa15.75■□□□□ 0.11
PDGFRB-203ENST00000517660 PXDNQ92626 1479 aa15.75■□□□□ 0.11
PDGFRB-203ENST00000517660 RPGRIP1LQ68CZ1 1315 aa15.74■□□□□ 0.11
PDGFRB-203ENST00000517660 VGFO15240 615 aaPredicted RBP15.74■□□□□ 0.11
PDGFRB-203ENST00000517660 YY1P25490 414 aa15.73■□□□□ 0.11
PDGFRB-203ENST00000517660 UNC5CLQ8IV45 518 aa15.72■□□□□ 0.11
PDGFRB-203ENST00000517660 SEPT12Q8IYM1 358 aa15.72■□□□□ 0.11
PDGFRB-203ENST00000517660 CLTCL1P53675 1640 aa15.7■□□□□ 0.1
PDGFRB-203ENST00000517660 SF3B2Q13435 895 aaKnown RBP15.7■□□□□ 0.1
PDGFRB-203ENST00000517660 ROBO2Q9HCK4 1378 aa15.7■□□□□ 0.1
PDGFRB-203ENST00000517660 ONECUT3O60422 494 aaPredicted RBP15.68■□□□□ 0.1
PDGFRB-203ENST00000517660 R3HDM1Q15032 1099 aaKnown RBP15.68■□□□□ 0.1
PDGFRB-203ENST00000517660 XPCQ01831 940 aaPredicted RBP15.67■□□□□ 0.1
PDGFRB-203ENST00000517660 NEXMIFQ5QGS0 1516 aa15.67■□□□□ 0.1
PDGFRB-203ENST00000517660 CCDC144AA2RUR9 1427 aa15.66■□□□□ 0.1
PDGFRB-203ENST00000517660 EN1Q05925 392 aaPredicted RBP15.65■□□□□ 0.1
PDGFRB-203ENST00000517660 RGL3Q3MIN7 710 aa15.65■□□□□ 0.1
PDGFRB-203ENST00000517660 KRT27Q7Z3Y8 459 aa15.65■□□□□ 0.1
PDGFRB-203ENST00000517660 BAG6P46379 1132 aa15.64■□□□□ 0.09
PDGFRB-203ENST00000517660 PRAG1Q86YV5 1406 aa15.64■□□□□ 0.09
PDGFRB-203ENST00000517660 NPHP3Q7Z494 1330 aa15.64■□□□□ 0.09
PDGFRB-203ENST00000517660 VPS72Q15906 364 aa15.63■□□□□ 0.09
PDGFRB-203ENST00000517660 USP32Q8NFA0 1604 aa15.63■□□□□ 0.09
PDGFRB-203ENST00000517660 IFFO2Q5TF58 517 aa15.62■□□□□ 0.09
PDGFRB-203ENST00000517660 RAB3GAP2Q9H2M9 1393 aa15.62■□□□□ 0.09
PDGFRB-203ENST00000517660 FOXO3O43524 673 aa15.61■□□□□ 0.09
PDGFRB-203ENST00000517660 KIF1BO60333 1816 aa15.61■□□□□ 0.09
PDGFRB-203ENST00000517660 ANKRD30BQ9BXX2 1392 aa15.61■□□□□ 0.09
PDGFRB-203ENST00000517660 DISP2A7MBM2 1401 aa15.6■□□□□ 0.09
PDGFRB-203ENST00000517660 ESCO1Q5FWF5 840 aa15.6■□□□□ 0.09
PDGFRB-203ENST00000517660 ADGRF5Q8IZF2 1346 aa15.6■□□□□ 0.09
PDGFRB-203ENST00000517660 SPATA31E1Q6ZUB1 1445 aa15.6■□□□□ 0.09
PDGFRB-203ENST00000517660 CDC42BPGQ6DT37 1551 aa15.59■□□□□ 0.09
PDGFRB-203ENST00000517660 PLCH1Q4KWH8 1693 aa15.59■□□□□ 0.09
PDGFRB-203ENST00000517660 TNS1Q9HBL0 1735 aaKnown RBP15.59■□□□□ 0.09
PDGFRB-203ENST00000517660 SPATA31A3Q5VYP0 1347 aa15.58■□□□□ 0.08
PDGFRB-203ENST00000517660 FAM182BQ5T319 152 aa15.57■□□□□ 0.08
PDGFRB-203ENST00000517660 RGPD1P0DJD0 1748 aa15.57■□□□□ 0.08
PDGFRB-203ENST00000517660 EZH2Q15910 746 aaKnown RBP15.56■□□□□ 0.08
PDGFRB-203ENST00000517660 NWD2Q9ULI1 1742 aa15.55■□□□□ 0.08
PDGFRB-203ENST00000517660 UTRNP46939 3433 aa15.53■□□□□ 0.08
PDGFRB-203ENST00000517660 CABLES1Q8TDN4 633 aa15.53■□□□□ 0.08
PDGFRB-203ENST00000517660 CAMKK2Q96RR4 588 aa15.53■□□□□ 0.08
PDGFRB-203ENST00000517660 STK26Q9P289 416 aa15.53■□□□□ 0.08
PDGFRB-203ENST00000517660 NRAPQ86VF7 1730 aa15.53■□□□□ 0.08
PDGFRB-203ENST00000517660 ABCA3Q99758 1704 aa15.52■□□□□ 0.08
PDGFRB-203ENST00000517660 FAM98CQ17RN3 349 aaKnown RBP15.52■□□□□ 0.08
PDGFRB-203ENST00000517660 TMEM132EQ6IEE7 984 aa15.52■□□□□ 0.08
PDGFRB-203ENST00000517660 C14orf93Q9H972 538 aaKnown RBP15.52■□□□□ 0.08
PDGFRB-203ENST00000517660 CAMTA1Q9Y6Y1 1673 aa15.51■□□□□ 0.07
PDGFRB-203ENST00000517660 CCDC9Q9Y3X0 531 aaKnown RBP15.51■□□□□ 0.07
PDGFRB-203ENST00000517660 LRPPRCP42704 1394 aaKnown RBP15.5■□□□□ 0.07
PDGFRB-203ENST00000517660 ABCC11Q96J66 1382 aa15.5■□□□□ 0.07
PDGFRB-203ENST00000517660 PPLO60437 1756 aa15.5■□□□□ 0.07
PDGFRB-203ENST00000517660 NUTM2FA1L443 756 aa15.5■□□□□ 0.07
PDGFRB-203ENST00000517660 FAM83GA6ND36 823 aa15.5■□□□□ 0.07
PDGFRB-203ENST00000517660 THSD7AQ9UPZ6 1657 aa15.49■□□□□ 0.07
PDGFRB-203ENST00000517660 WAPLQ7Z5K2 1190 aa15.49■□□□□ 0.07
PDGFRB-203ENST00000517660 ZNF784Q8NCA9 323 aaPredicted RBP15.49■□□□□ 0.07
PDGFRB-203ENST00000517660 SIRT1Q96EB6 747 aa15.49■□□□□ 0.07
PDGFRB-203ENST00000517660 PIK3C2GO75747 1445 aa15.49■□□□□ 0.07
PDGFRB-203ENST00000517660 CFAP70Q5T0N1 1121 aa15.48■□□□□ 0.07
PDGFRB-203ENST00000517660 TNS3Q68CZ2 1445 aa15.48■□□□□ 0.07
PDGFRB-203ENST00000517660 RREB1Q92766 1687 aa15.48■□□□□ 0.07
PDGFRB-203ENST00000517660 SENP3-EIF4A1A0A087X0R7 540 aa15.47■□□□□ 0.07
PDGFRB-203ENST00000517660 A0A0G2JS52 829 aa15.47■□□□□ 0.07
PDGFRB-203ENST00000517660 MYT1Q01538 1121 aa15.47■□□□□ 0.07
PDGFRB-203ENST00000517660 TECPR2O15040 1411 aa15.46■□□□□ 0.07
PDGFRB-203ENST00000517660 KRT28Q7Z3Y7 464 aa15.46■□□□□ 0.07
PDGFRB-203ENST00000517660 STAC3Q96MF2 364 aa15.46■□□□□ 0.07
PDGFRB-203ENST00000517660 DHX57Q6P158 1386 aaKnown RBP15.46■□□□□ 0.07
PDGFRB-203ENST00000517660 NINLQ9Y2I6 1382 aa15.46■□□□□ 0.07
PDGFRB-203ENST00000517660 NUP188Q5SRE5 1749 aa15.46■□□□□ 0.06
PDGFRB-203ENST00000517660 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
PDGFRB-203ENST00000517660 KIF1AQ12756 1690 aa15.44■□□□□ 0.06
PDGFRB-203ENST00000517660 YTHDC2Q9H6S0 1430 aaKnown RBP15.44■□□□□ 0.06
PDGFRB-203ENST00000517660 FMN2Q9NZ56 1722 aa15.44■□□□□ 0.06
PDGFRB-203ENST00000517660 DCAF11Q8TEB1 546 aa15.44■□□□□ 0.06
PDGFRB-203ENST00000517660 KDM2AQ9Y2K7 1162 aa15.44■□□□□ 0.06
PDGFRB-203ENST00000517660 PLEKHH1Q9ULM0 1364 aa15.44■□□□□ 0.06
PDGFRB-203ENST00000517660 NRXN1Q9ULB1 1477 aa15.44■□□□□ 0.06
PDGFRB-203ENST00000517660 ADGRB2O60241 1585 aa15.44■□□□□ 0.06
PDGFRB-203ENST00000517660 CEP350Q5VT06 3117 aa15.43■□□□□ 0.06
PDGFRB-203ENST00000517660 TRIM37O94972 964 aa15.43■□□□□ 0.06
PDGFRB-203ENST00000517660 SPATA31A5Q5VU36 1347 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms