RNA–Protein interactions for RNA: ENST00000517656.5

CTNNA1-204, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-204ENST00000517656 PIK3C2GO75747 1445 aa12.54□□□□□ -0.4
CTNNA1-204ENST00000517656 RXRBP28702 533 aa12.54□□□□□ -0.4
CTNNA1-204ENST00000517656 IFT172Q9UG01 1749 aa12.54□□□□□ -0.4
CTNNA1-204ENST00000517656 ABCC11Q96J66 1382 aa12.53□□□□□ -0.4
CTNNA1-204ENST00000517656 CDK12Q9NYV4 1490 aaPredicted RBP12.53□□□□□ -0.4
CTNNA1-204ENST00000517656 C8orf37Q96NL8 207 aa12.52□□□□□ -0.41
CTNNA1-204ENST00000517656 STK26Q9P289 416 aa12.52□□□□□ -0.41
CTNNA1-204ENST00000517656 WAPLQ7Z5K2 1190 aa12.51□□□□□ -0.41
CTNNA1-204ENST00000517656 ESCO1Q5FWF5 840 aa12.5□□□□□ -0.41
CTNNA1-204ENST00000517656 TMEM132EQ6IEE7 984 aa12.5□□□□□ -0.41
CTNNA1-204ENST00000517656 NPHP3Q7Z494 1330 aa12.5□□□□□ -0.41
CTNNA1-204ENST00000517656 YTHDC2Q9H6S0 1430 aaKnown RBP12.5□□□□□ -0.41
CTNNA1-204ENST00000517656 KNDC1Q76NI1 1749 aa12.5□□□□□ -0.41
CTNNA1-204ENST00000517656 MYOM2P54296 1465 aa12.49□□□□□ -0.41
CTNNA1-204ENST00000517656 NRXN1Q9ULB1 1477 aa12.49□□□□□ -0.41
CTNNA1-204ENST00000517656 PLEKHH1Q9ULM0 1364 aa12.49□□□□□ -0.41
CTNNA1-204ENST00000517656 ADAMTS2O95450 1211 aa12.49□□□□□ -0.41
CTNNA1-204ENST00000517656 UPF1Q92900 1129 aaKnown RBP eCLIP12.49□□□□□ -0.41
CTNNA1-204ENST00000517656 COL22A1Q8NFW1 1626 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-204ENST00000517656 PXDNQ92626 1479 aa12.48□□□□□ -0.41
CTNNA1-204ENST00000517656 RAB3GAP2Q9H2M9 1393 aa12.48□□□□□ -0.41
CTNNA1-204ENST00000517656 RBM6P78332 1123 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-204ENST00000517656 SIRT1Q96EB6 747 aa12.48□□□□□ -0.41
CTNNA1-204ENST00000517656 NGLY1Q96IV0 654 aa12.48□□□□□ -0.41
CTNNA1-204ENST00000517656 C14orf93Q9H972 538 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-204ENST00000517656 QTRT2Q9H974 415 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-204ENST00000517656 RGS12O14924 1447 aa12.46□□□□□ -0.41
CTNNA1-204ENST00000517656 FOXO3O43524 673 aa12.46□□□□□ -0.41
CTNNA1-204ENST00000517656 FNBP4Q8N3X1 1017 aaPredicted RBP12.46□□□□□ -0.41
CTNNA1-204ENST00000517656 DHX57Q6P158 1386 aaKnown RBP12.45□□□□□ -0.42
CTNNA1-204ENST00000517656 NUTM2FA1L443 756 aa12.45□□□□□ -0.42
CTNNA1-204ENST00000517656 CFAP70Q5T0N1 1121 aa12.45□□□□□ -0.42
CTNNA1-204ENST00000517656 USP21Q9UK80 565 aa12.45□□□□□ -0.42
CTNNA1-204ENST00000517656 FMN2Q9NZ56 1722 aa12.45□□□□□ -0.42
CTNNA1-204ENST00000517656 XPCQ01831 940 aaPredicted RBP12.44□□□□□ -0.42
CTNNA1-204ENST00000517656 TRPC5Q9UL62 973 aaPredicted RBP12.43□□□□□ -0.42
CTNNA1-204ENST00000517656 KIF1AQ12756 1690 aa12.42□□□□□ -0.42
CTNNA1-204ENST00000517656 ATRNO75882 1429 aa12.42□□□□□ -0.42
CTNNA1-204ENST00000517656 DLC1Q96QB1 1528 aa12.42□□□□□ -0.42
CTNNA1-204ENST00000517656 SPATA31A3Q5VYP0 1347 aa12.41□□□□□ -0.42
CTNNA1-204ENST00000517656 PRAM1Q96QH2 718 aa12.41□□□□□ -0.42
CTNNA1-204ENST00000517656 ADGRB1O14514 1584 aa12.4□□□□□ -0.42
CTNNA1-204ENST00000517656 HRCP23327 699 aa12.4□□□□□ -0.42
CTNNA1-204ENST00000517656 KRT28Q7Z3Y7 464 aa12.4□□□□□ -0.42
CTNNA1-204ENST00000517656 PHF8Q9UPP1 1060 aa12.4□□□□□ -0.42
CTNNA1-204ENST00000517656 BCL9LQ86UU0 1499 aa12.4□□□□□ -0.43
CTNNA1-204ENST00000517656 SAFB2Q14151 953 aaKnown RBP eCLIP12.39□□□□□ -0.43
CTNNA1-204ENST00000517656 POGKQ9P215 609 aa12.39□□□□□ -0.43
CTNNA1-204ENST00000517656 ANKARQ7Z5J8 1434 aa12.38□□□□□ -0.43
CTNNA1-204ENST00000517656 PSME1Q06323 249 aa12.38□□□□□ -0.43
CTNNA1-204ENST00000517656 STAC3Q96MF2 364 aa12.38□□□□□ -0.43
CTNNA1-204ENST00000517656 ATAD2Q6PL18 1390 aa12.38□□□□□ -0.43
CTNNA1-204ENST00000517656 ADGRB2O60241 1585 aa12.38□□□□□ -0.43
CTNNA1-204ENST00000517656 TNS3Q68CZ2 1445 aa12.37□□□□□ -0.43
CTNNA1-204ENST00000517656 KCNA4P22459 653 aa12.37□□□□□ -0.43
CTNNA1-204ENST00000517656 DCAF11Q8TEB1 546 aa12.37□□□□□ -0.43
CTNNA1-204ENST00000517656 SBNO1A3KN83 1393 aa12.37□□□□□ -0.43
CTNNA1-204ENST00000517656 EP400Q96L91 3159 aa12.37□□□□□ -0.43
CTNNA1-204ENST00000517656 MARF1Q9Y4F3 1742 aaKnown RBP12.37□□□□□ -0.43
CTNNA1-204ENST00000517656 SLIT2O94813 1529 aa12.37□□□□□ -0.43
CTNNA1-204ENST00000517656 TRAK1Q9UPV9 953 aa12.36□□□□□ -0.43
CTNNA1-204ENST00000517656 UNC5CLQ8IV45 518 aa12.35□□□□□ -0.43
CTNNA1-204ENST00000517656 GJD4Q96KN9 370 aaPredicted RBP12.35□□□□□ -0.43
CTNNA1-204ENST00000517656 KDM2AQ9Y2K7 1162 aa12.35□□□□□ -0.43
CTNNA1-204ENST00000517656 USP32Q8NFA0 1604 aa12.35□□□□□ -0.43
CTNNA1-204ENST00000517656 ARHGEF10O15013 1369 aa12.34□□□□□ -0.43
CTNNA1-204ENST00000517656 EIF3AQ14152 1382 aaKnown RBP12.34□□□□□ -0.43
CTNNA1-204ENST00000517656 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.34□□□□□ -0.43
CTNNA1-204ENST00000517656 RGPD8O14715 1765 aaPredicted RBP12.33□□□□□ -0.44
CTNNA1-204ENST00000517656 SRCAPQ6ZRS2 3230 aa12.33□□□□□ -0.44
CTNNA1-204ENST00000517656 PMFBP1Q8TBY8 1022 aa12.33□□□□□ -0.44
CTNNA1-204ENST00000517656 HIRIP3Q9BW71 556 aaPredicted RBP12.33□□□□□ -0.44
CTNNA1-204ENST00000517656 MINK1Q8N4C8 1332 aaPredicted RBP12.33□□□□□ -0.44
CTNNA1-204ENST00000517656 RALGAPBQ86X10 1494 aa12.33□□□□□ -0.44
CTNNA1-204ENST00000517656 TULP4Q9NRJ4 1543 aa12.32□□□□□ -0.44
CTNNA1-204ENST00000517656 WASLO00401 505 aaPredicted RBP12.32□□□□□ -0.44
CTNNA1-204ENST00000517656 HAP1P54257 671 aaPredicted RBP12.32□□□□□ -0.44
CTNNA1-204ENST00000517656 CABLES1Q8TDN4 633 aa12.32□□□□□ -0.44
CTNNA1-204ENST00000517656 PRR36Q9H6K5 1346 aa12.32□□□□□ -0.44
CTNNA1-204ENST00000517656 LMOD2Q6P5Q4 547 aa12.31□□□□□ -0.44
CTNNA1-204ENST00000517656 GLI3P10071 1580 aa12.3□□□□□ -0.44
CTNNA1-204ENST00000517656 GPRASP1Q5JY77 1395 aa12.3□□□□□ -0.44
CTNNA1-204ENST00000517656 ABCA3Q99758 1704 aa12.29□□□□□ -0.44
CTNNA1-204ENST00000517656 VPS72Q15906 364 aa12.29□□□□□ -0.44
CTNNA1-204ENST00000517656 CCDC125Q86Z20 511 aa12.29□□□□□ -0.44
CTNNA1-204ENST00000517656 TRPM3Q9HCF6 1732 aaPredicted RBP12.28□□□□□ -0.44
CTNNA1-204ENST00000517656 PLEKHG5O94827 1062 aa12.28□□□□□ -0.44
CTNNA1-204ENST00000517656 NWD2Q9ULI1 1742 aa12.28□□□□□ -0.44
CTNNA1-204ENST00000517656 ATP7BP35670 1465 aa12.27□□□□□ -0.44
CTNNA1-204ENST00000517656 PLCH1Q4KWH8 1693 aa12.27□□□□□ -0.45
CTNNA1-204ENST00000517656 FAM83GA6ND36 823 aa12.27□□□□□ -0.45
CTNNA1-204ENST00000517656 NGDNQ8NEJ9 315 aaKnown RBP12.27□□□□□ -0.45
CTNNA1-204ENST00000517656 ARHGEF28Q8N1W1 1705 aaKnown RBP12.27□□□□□ -0.45
CTNNA1-204ENST00000517656 ALS2Q96Q42 1657 aa12.26□□□□□ -0.45
CTNNA1-204ENST00000517656 ONECUT3O60422 494 aaPredicted RBP12.26□□□□□ -0.45
CTNNA1-204ENST00000517656 NUDT16Q96DE0 195 aaKnown RBP12.26□□□□□ -0.45
CTNNA1-204ENST00000517656 SEPT12Q8IYM1 358 aa12.25□□□□□ -0.45
CTNNA1-204ENST00000517656 BLMP54132 1417 aaPredicted RBP12.24□□□□□ -0.45
CTNNA1-204ENST00000517656 CDK19Q9BWU1 502 aa12.24□□□□□ -0.45
CTNNA1-204ENST00000517656 KIAA1210Q9ULL0 1709 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms