RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 TULP4Q9NRJ4 1543 aa14.01□□□□□ -0.17
CLN8-202ENST00000517514 CENPJQ9HC77 1338 aaPredicted RBP14.01□□□□□ -0.17
CLN8-202ENST00000517514 ST20-MTHFSA0A0A6YYL1 179 aa14.01□□□□□ -0.17
CLN8-202ENST00000517514 HSPA5P11021 654 aaKnown RBP14.01□□□□□ -0.17
CLN8-202ENST00000517514 FMN2Q9NZ56 1722 aa14.01□□□□□ -0.17
CLN8-202ENST00000517514 RGPD8O14715 1765 aaPredicted RBP14□□□□□ -0.17
CLN8-202ENST00000517514 USP32Q8NFA0 1604 aa14□□□□□ -0.17
CLN8-202ENST00000517514 CDC42BPGQ6DT37 1551 aa14□□□□□ -0.17
CLN8-202ENST00000517514 SBNO2Q9Y2G9 1366 aa13.99□□□□□ -0.17
CLN8-202ENST00000517514 HIRIP3Q9BW71 556 aaPredicted RBP13.99□□□□□ -0.17
CLN8-202ENST00000517514 POGKQ9P215 609 aa13.99□□□□□ -0.17
CLN8-202ENST00000517514 EIF3AQ14152 1382 aaKnown RBP13.98□□□□□ -0.17
CLN8-202ENST00000517514 MINK1Q8N4C8 1332 aaPredicted RBP13.98□□□□□ -0.17
CLN8-202ENST00000517514 EIF4G2P78344 907 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLN8-202ENST00000517514 IQSEC2Q5JU85 1478 aa13.96□□□□□ -0.17
CLN8-202ENST00000517514 CERKQ8TCT0 537 aa13.96□□□□□ -0.17
CLN8-202ENST00000517514 C11orf95C9JLR9 678 aaPredicted RBP13.95□□□□□ -0.18
CLN8-202ENST00000517514 C19orf44Q9H6X5 657 aa13.95□□□□□ -0.18
CLN8-202ENST00000517514 DCCP43146 1447 aa13.95□□□□□ -0.18
CLN8-202ENST00000517514 DISP3Q9P2K9 1392 aa13.95□□□□□ -0.18
CLN8-202ENST00000517514 MST1RQ04912 1400 aa13.94□□□□□ -0.18
CLN8-202ENST00000517514 TOPAZ1Q8N9V7 1692 aa13.94□□□□□ -0.18
CLN8-202ENST00000517514 PRR36Q9H6K5 1346 aa13.93□□□□□ -0.18
CLN8-202ENST00000517514 WASLO00401 505 aaPredicted RBP13.93□□□□□ -0.18
CLN8-202ENST00000517514 MSH6P52701 1360 aa13.93□□□□□ -0.18
CLN8-202ENST00000517514 ATP7BP35670 1465 aa13.93□□□□□ -0.18
CLN8-202ENST00000517514 CDK19Q9BWU1 502 aa13.92□□□□□ -0.18
CLN8-202ENST00000517514 MYOM1P52179 1685 aa13.91□□□□□ -0.18
CLN8-202ENST00000517514 C14orf37Q86TY3 774 aa13.91□□□□□ -0.18
CLN8-202ENST00000517514 C1orf167Q5SNV9 1468 aa13.9□□□□□ -0.18
CLN8-202ENST00000517514 NUTM2FA1L443 756 aa13.89□□□□□ -0.19
CLN8-202ENST00000517514 CABP2Q9NPB3 220 aa13.89□□□□□ -0.19
CLN8-202ENST00000517514 ITSN1Q15811 1721 aa13.89□□□□□ -0.19
CLN8-202ENST00000517514 ANKARQ7Z5J8 1434 aa13.89□□□□□ -0.19
CLN8-202ENST00000517514 EVC2Q86UK5 1308 aa13.89□□□□□ -0.19
CLN8-202ENST00000517514 CADPS2Q86UW7 1296 aa13.88□□□□□ -0.19
CLN8-202ENST00000517514 ATF3P18847 181 aa13.87□□□□□ -0.19
CLN8-202ENST00000517514 NUDT16Q96DE0 195 aaKnown RBP13.87□□□□□ -0.19
CLN8-202ENST00000517514 ROBO1Q9Y6N7 1651 aa13.87□□□□□ -0.19
CLN8-202ENST00000517514 TMF1P82094 1093 aa13.86□□□□□ -0.19
CLN8-202ENST00000517514 ORAI2Q96SN7 254 aa13.86□□□□□ -0.19
CLN8-202ENST00000517514 SLAIN2Q9P270 581 aa13.86□□□□□ -0.19
CLN8-202ENST00000517514 KIF7Q2M1P5 1343 aa13.86□□□□□ -0.19
CLN8-202ENST00000517514 AKAP12Q02952 1782 aa13.86□□□□□ -0.19
CLN8-202ENST00000517514 PUS7Q96PZ0 661 aaKnown RBP13.85□□□□□ -0.19
CLN8-202ENST00000517514 NHSL1Q5SYE7 1610 aa13.85□□□□□ -0.19
CLN8-202ENST00000517514 CD163L1Q9NR16 1453 aa13.85□□□□□ -0.19
CLN8-202ENST00000517514 WASHC2AQ641Q2 1341 aa13.85□□□□□ -0.19
CLN8-202ENST00000517514 SRPK2P78362 688 aaKnown RBP13.84□□□□□ -0.19
CLN8-202ENST00000517514 KIF1AQ12756 1690 aa13.84□□□□□ -0.19
CLN8-202ENST00000517514 CCDC7Q96M83 1385 aa13.83□□□□□ -0.19
CLN8-202ENST00000517514 UBAP1LF5GYI3 381 aa13.83□□□□□ -0.2
CLN8-202ENST00000517514 BRINP3Q76B58 766 aa13.83□□□□□ -0.2
CLN8-202ENST00000517514 PPIP5K1Q6PFW1 1433 aa13.82□□□□□ -0.2
CLN8-202ENST00000517514 PLEKHG3A1L390 1219 aa13.82□□□□□ -0.2
CLN8-202ENST00000517514 SLC24A1O60721 1099 aa13.82□□□□□ -0.2
CLN8-202ENST00000517514 CCDC61Q9Y6R9 512 aa13.82□□□□□ -0.2
CLN8-202ENST00000517514 ATAD2Q6PL18 1390 aa13.82□□□□□ -0.2
CLN8-202ENST00000517514 MON2Q7Z3U7 1717 aa13.81□□□□□ -0.2
CLN8-202ENST00000517514 TRPM3Q9HCF6 1732 aaPredicted RBP13.81□□□□□ -0.2
CLN8-202ENST00000517514 SLC12A5Q9H2X9 1139 aa13.81□□□□□ -0.2
CLN8-202ENST00000517514 CABP1Q9NZU7 370 aa13.81□□□□□ -0.2
CLN8-202ENST00000517514 POLR3AO14802 1390 aaPredicted RBP13.81□□□□□ -0.2
CLN8-202ENST00000517514 NRKQ7Z2Y5 1582 aa13.8□□□□□ -0.2
CLN8-202ENST00000517514 AHDC1Q5TGY3 1603 aaPredicted RBP13.8□□□□□ -0.2
CLN8-202ENST00000517514 TOM1O60784 492 aa13.8□□□□□ -0.2
CLN8-202ENST00000517514 ESCO1Q5FWF5 840 aa13.8□□□□□ -0.2
CLN8-202ENST00000517514 PMFBP1Q8TBY8 1022 aa13.8□□□□□ -0.2
CLN8-202ENST00000517514 DDX17Q92841 729 aaKnown RBP13.8□□□□□ -0.2
CLN8-202ENST00000517514 PHF8Q9UPP1 1060 aa13.8□□□□□ -0.2
CLN8-202ENST00000517514 CPSF1Q10570 1443 aaKnown RBP13.8□□□□□ -0.2
CLN8-202ENST00000517514 PXDNQ92626 1479 aa13.79□□□□□ -0.2
CLN8-202ENST00000517514 CDCA8Q53HL2 280 aa13.78□□□□□ -0.2
CLN8-202ENST00000517514 ACEP12821 1306 aa13.78□□□□□ -0.2
CLN8-202ENST00000517514 PHLPP1O60346 1717 aa13.77□□□□□ -0.21
CLN8-202ENST00000517514 PIP4K2BP78356 416 aa13.77□□□□□ -0.21
CLN8-202ENST00000517514 COL16A1Q07092 1604 aaPredicted RBP13.77□□□□□ -0.21
CLN8-202ENST00000517514 SSH2Q76I76 1423 aa13.77□□□□□ -0.21
CLN8-202ENST00000517514 ALS2Q96Q42 1657 aa13.76□□□□□ -0.21
CLN8-202ENST00000517514 A0A1W2PP64 1363 aa13.76□□□□□ -0.21
CLN8-202ENST00000517514 NINLQ9Y2I6 1382 aa13.76□□□□□ -0.21
CLN8-202ENST00000517514 ZNF316A6NFI3 1004 aaPredicted RBP13.76□□□□□ -0.21
CLN8-202ENST00000517514 FOXO3O43524 673 aa13.76□□□□□ -0.21
CLN8-202ENST00000517514 MARF1Q9Y4F3 1742 aaKnown RBP13.76□□□□□ -0.21
CLN8-202ENST00000517514 TMC1Q8TDI8 760 aa13.75□□□□□ -0.21
CLN8-202ENST00000517514 POLR3GLQ9BT43 218 aa13.75□□□□□ -0.21
CLN8-202ENST00000517514 CARD14Q9BXL6 1004 aa13.75□□□□□ -0.21
CLN8-202ENST00000517514 USP6P35125 1406 aa13.74□□□□□ -0.21
CLN8-202ENST00000517514 ANKRD36BQ8N2N9 1353 aa13.74□□□□□ -0.21
CLN8-202ENST00000517514 SOS2Q07890 1332 aaPredicted RBP13.74□□□□□ -0.21
CLN8-202ENST00000517514 XPCQ01831 940 aaPredicted RBP13.74□□□□□ -0.21
CLN8-202ENST00000517514 PIK3C2AO00443 1686 aa13.73□□□□□ -0.21
CLN8-202ENST00000517514 KRT28Q7Z3Y7 464 aa13.72□□□□□ -0.21
CLN8-202ENST00000517514 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
CLN8-202ENST00000517514 PANK3Q9H999 370 aa13.72□□□□□ -0.21
CLN8-202ENST00000517514 CRYBG1Q9Y4K1 1723 aa13.72□□□□□ -0.21
CLN8-202ENST00000517514 NPHP3Q7Z494 1330 aa13.71□□□□□ -0.21
CLN8-202ENST00000517514 SCAF1Q9H7N4 1312 aaKnown RBP13.71□□□□□ -0.21
CLN8-202ENST00000517514 FBXO41Q8TF61 875 aa13.71□□□□□ -0.21
CLN8-202ENST00000517514 USP54Q70EL1 1684 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms