RNA–Protein interactions for RNA: ENST00000517402.1

HOXA11-202, Transcript of homeobox A11, humanhuman

TSL 1 (best)

Gene HOXA11, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-202ENST00000517402 ERICH6BQ5W0A0 696 aa26.24■■□□□ 1.79
HOXA11-202ENST00000517402 MINK1Q8N4C8 1332 aaPredicted RBP26.24■■□□□ 1.79
HOXA11-202ENST00000517402 SETD1AO15047 1707 aaKnown RBP26.23■■□□□ 1.79
HOXA11-202ENST00000517402 PPP4R2Q9NY27 417 aa26.23■■□□□ 1.79
HOXA11-202ENST00000517402 USP32Q8NFA0 1604 aa26.22■■□□□ 1.79
HOXA11-202ENST00000517402 TNNT2P45379 298 aaPredicted RBP26.21■■□□□ 1.79
HOXA11-202ENST00000517402 SRPK2P78362 688 aaKnown RBP26.2■■□□□ 1.79
HOXA11-202ENST00000517402 POGKQ9P215 609 aa26.2■■□□□ 1.79
HOXA11-202ENST00000517402 PDE3BQ13370 1112 aa26.2■■□□□ 1.78
HOXA11-202ENST00000517402 ANKRD36BQ8N2N9 1353 aa26.19■■□□□ 1.78
HOXA11-202ENST00000517402 NRXN3Q9Y4C0 1643 aa26.19■■□□□ 1.78
HOXA11-202ENST00000517402 PUS7Q96PZ0 661 aaKnown RBP26.18■■□□□ 1.78
HOXA11-202ENST00000517402 MORC1Q86VD1 984 aa26.18■■□□□ 1.78
HOXA11-202ENST00000517402 PLEKHH1Q9ULM0 1364 aa26.18■■□□□ 1.78
HOXA11-202ENST00000517402 B4GALNT3Q6L9W6 998 aa26.17■■□□□ 1.78
HOXA11-202ENST00000517402 CCDC146Q8IYE0 955 aa26.17■■□□□ 1.78
HOXA11-202ENST00000517402 A0A1W2PP64 1363 aa26.15■■□□□ 1.78
HOXA11-202ENST00000517402 CGNL1Q0VF96 1302 aa26.15■■□□□ 1.78
HOXA11-202ENST00000517402 TNRQ92752 1358 aa26.15■■□□□ 1.78
HOXA11-202ENST00000517402 RCAN3Q9UKA8 241 aa26.13■■□□□ 1.77
HOXA11-202ENST00000517402 SHPRHQ149N8 1683 aa26.12■■□□□ 1.77
HOXA11-202ENST00000517402 WAPLQ7Z5K2 1190 aa26.11■■□□□ 1.77
HOXA11-202ENST00000517402 POLR3AO14802 1390 aaPredicted RBP26.11■■□□□ 1.77
HOXA11-202ENST00000517402 UBR1Q8IWV7 1749 aa26.11■■□□□ 1.77
HOXA11-202ENST00000517402 ATAD2Q6PL18 1390 aa26.09■■□□□ 1.77
HOXA11-202ENST00000517402 DLC1Q96QB1 1528 aa26.09■■□□□ 1.77
HOXA11-202ENST00000517402 RRP1P56182 461 aaKnown RBP26.09■■□□□ 1.77
HOXA11-202ENST00000517402 METP08581 1390 aa26.09■■□□□ 1.77
HOXA11-202ENST00000517402 CD163L1Q9NR16 1453 aa26.09■■□□□ 1.77
HOXA11-202ENST00000517402 NINLQ9Y2I6 1382 aa26.08■■□□□ 1.77
HOXA11-202ENST00000517402 CDK19Q9BWU1 502 aa26.07■■□□□ 1.76
HOXA11-202ENST00000517402 ZNF521Q96K83 1311 aa26.07■■□□□ 1.76
HOXA11-202ENST00000517402 ABCC11Q96J66 1382 aa26.07■■□□□ 1.76
HOXA11-202ENST00000517402 APAF1O14727 1248 aa26.06■■□□□ 1.76
HOXA11-202ENST00000517402 CEBPAP49715 358 aaPredicted RBP26.06■■□□□ 1.76
HOXA11-202ENST00000517402 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.05■■□□□ 1.76
HOXA11-202ENST00000517402 NSD2O96028 1365 aa26.04■■□□□ 1.76
HOXA11-202ENST00000517402 MTHFSP49914 203 aa26.03■■□□□ 1.76
HOXA11-202ENST00000517402 TMEM2Q9UHN6 1383 aa26.03■■□□□ 1.76
HOXA11-202ENST00000517402 GGNBP2Q9H3C7 697 aa26.02■■□□□ 1.76
HOXA11-202ENST00000517402 PLPPR3Q6T4P5 718 aa26.01■■□□□ 1.75
HOXA11-202ENST00000517402 CABP1Q9NZU7 370 aa26■■□□□ 1.75
HOXA11-202ENST00000517402 DUSP27Q5VZP5 1158 aa25.99■■□□□ 1.75
HOXA11-202ENST00000517402 TXNDC2Q86VQ3 553 aa25.99■■□□□ 1.75
HOXA11-202ENST00000517402 TERF2IPQ9NYB0 399 aa25.99■■□□□ 1.75
HOXA11-202ENST00000517402 C3P01024 1663 aa25.99■■□□□ 1.75
HOXA11-202ENST00000517402 GOLGA2Q08379 1002 aa25.99■■□□□ 1.75
HOXA11-202ENST00000517402 NLRP1Q9C000 1473 aa25.98■■□□□ 1.75
HOXA11-202ENST00000517402 ANKRD26Q9UPS8 1709 aa25.98■■□□□ 1.75
HOXA11-202ENST00000517402 FER1L4A9Z1Z3 1794 aa25.98■■□□□ 1.75
HOXA11-202ENST00000517402 KNDC1Q76NI1 1749 aa25.97■■□□□ 1.75
HOXA11-202ENST00000517402 PLIN1O60240 522 aa25.97■■□□□ 1.75
HOXA11-202ENST00000517402 SPINK5Q9NQ38 1064 aaPredicted RBP25.96■■□□□ 1.75
HOXA11-202ENST00000517402 FYB1O15117 783 aa25.95■■□□□ 1.74
HOXA11-202ENST00000517402 EXOC6Q8TAG9 804 aa25.95■■□□□ 1.74
HOXA11-202ENST00000517402 CCDC136Q96JN2 1154 aa25.95■■□□□ 1.74
HOXA11-202ENST00000517402 KIF20BQ96Q89 1820 aa25.94■■□□□ 1.74
HOXA11-202ENST00000517402 HDGFP51858 240 aaKnown RBP25.94■■□□□ 1.74
HOXA11-202ENST00000517402 HDGFL2Q7Z4V5 671 aaPredicted RBP25.94■■□□□ 1.74
HOXA11-202ENST00000517402 DMRT2Q9Y5R5 561 aa25.94■■□□□ 1.74
HOXA11-202ENST00000517402 ADAMTS13Q76LX8 1427 aa25.93■■□□□ 1.74
HOXA11-202ENST00000517402 LTKP29376 864 aa25.93■■□□□ 1.74
HOXA11-202ENST00000517402 CPS1P31327 1500 aa25.92■■□□□ 1.74
HOXA11-202ENST00000517402 SLFN5Q08AF3 891 aa25.92■■□□□ 1.74
HOXA11-202ENST00000517402 CFAP53Q96M91 514 aa25.92■■□□□ 1.74
HOXA11-202ENST00000517402 TECPR2O15040 1411 aa25.91■■□□□ 1.74
HOXA11-202ENST00000517402 IQSEC2Q5JU85 1478 aa25.9■■□□□ 1.74
HOXA11-202ENST00000517402 ATP7BP35670 1465 aa25.89■■□□□ 1.74
HOXA11-202ENST00000517402 WASLO00401 505 aaPredicted RBP25.89■■□□□ 1.74
HOXA11-202ENST00000517402 RRP7AQ9Y3A4 280 aaKnown RBP25.89■■□□□ 1.74
HOXA11-202ENST00000517402 MED14O60244 1454 aa25.89■■□□□ 1.73
HOXA11-202ENST00000517402 NEUROD2Q15784 382 aa25.88■■□□□ 1.73
HOXA11-202ENST00000517402 RBM19Q9Y4C8 960 aaKnown RBP25.88■■□□□ 1.73
HOXA11-202ENST00000517402 FAM135BQ49AJ0 1406 aa25.88■■□□□ 1.73
HOXA11-202ENST00000517402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.88■■□□□ 1.73
HOXA11-202ENST00000517402 ROBO2Q9HCK4 1378 aa25.88■■□□□ 1.73
HOXA11-202ENST00000517402 NCKAP5LQ9HCH0 1330 aa25.87■■□□□ 1.73
HOXA11-202ENST00000517402 PPIP5K1Q6PFW1 1433 aa25.87■■□□□ 1.73
HOXA11-202ENST00000517402 RUNDC1Q96C34 613 aa25.87■■□□□ 1.73
HOXA11-202ENST00000517402 TRMT2AQ8IZ69 625 aaKnown RBP25.86■■□□□ 1.73
HOXA11-202ENST00000517402 PLEKHG1Q9ULL1 1385 aa25.86■■□□□ 1.73
HOXA11-202ENST00000517402 COL3A1P02461 1466 aaPredicted RBP25.85■■□□□ 1.73
HOXA11-202ENST00000517402 WWC1Q8IX03 1113 aa25.85■■□□□ 1.73
HOXA11-202ENST00000517402 TCP11L2Q8N4U5 519 aa25.85■■□□□ 1.73
HOXA11-202ENST00000517402 U2AF1L5P0DN76 240 aaPredicted RBP25.84■■□□□ 1.73
HOXA11-202ENST00000517402 U2AF1Q01081 240 aaKnown RBP eCLIP25.84■■□□□ 1.73
HOXA11-202ENST00000517402 SLC26A8Q96RN1 970 aa25.84■■□□□ 1.73
HOXA11-202ENST00000517402 C20orf194Q5TEA3 1177 aa25.83■■□□□ 1.73
HOXA11-202ENST00000517402 NKTRP30414 1462 aaKnown RBP25.83■■□□□ 1.73
HOXA11-202ENST00000517402 E9PSI1 815 aa25.82■■□□□ 1.72
HOXA11-202ENST00000517402 FBLN1P23142 703 aa25.81■■□□□ 1.72
HOXA11-202ENST00000517402 CPSF1Q10570 1443 aaKnown RBP25.81■■□□□ 1.72
HOXA11-202ENST00000517402 NUDT16Q96DE0 195 aaKnown RBP25.81■■□□□ 1.72
HOXA11-202ENST00000517402 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.81■■□□□ 1.72
HOXA11-202ENST00000517402 NGEFQ8N5V2 710 aa25.8■■□□□ 1.72
HOXA11-202ENST00000517402 CRBNQ96SW2 442 aa25.8■■□□□ 1.72
HOXA11-202ENST00000517402 SLIT1O75093 1534 aa25.8■■□□□ 1.72
HOXA11-202ENST00000517402 SIRT1Q96EB6 747 aa25.79■■□□□ 1.72
HOXA11-202ENST00000517402 CDC42BPGQ6DT37 1551 aa25.79■■□□□ 1.72
HOXA11-202ENST00000517402 U2SURPO15042 1029 aaKnown RBP25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms