RNA–Protein interactions for RNA: ENST00000517386.1

HMBOX1-204, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-204ENST00000517386 DIP2AQ14689 1571 aa11.92□□□□□ -0.5
HMBOX1-204ENST00000517386 SPATA31A6Q5VVP1 1343 aa11.92□□□□□ -0.5
HMBOX1-204ENST00000517386 NCOA3Q9Y6Q9 1424 aa11.92□□□□□ -0.5
HMBOX1-204ENST00000517386 NRXN3Q9Y4C0 1643 aa11.91□□□□□ -0.5
HMBOX1-204ENST00000517386 AHDC1Q5TGY3 1603 aaPredicted RBP11.9□□□□□ -0.5
HMBOX1-204ENST00000517386 ZNF772Q68DY9 489 aaPredicted RBP11.9□□□□□ -0.5
HMBOX1-204ENST00000517386 AFF2P51816 1311 aa11.89□□□□□ -0.51
HMBOX1-204ENST00000517386 SPHKAPQ2M3C7 1700 aa11.89□□□□□ -0.51
HMBOX1-204ENST00000517386 MST1RQ04912 1400 aa11.89□□□□□ -0.51
HMBOX1-204ENST00000517386 C8orf37Q96NL8 207 aa11.89□□□□□ -0.51
HMBOX1-204ENST00000517386 ASXL1Q8IXJ9 1541 aa11.89□□□□□ -0.51
HMBOX1-204ENST00000517386 CLTCL1P53675 1640 aa11.89□□□□□ -0.51
HMBOX1-204ENST00000517386 RXRBP28702 533 aa11.88□□□□□ -0.51
HMBOX1-204ENST00000517386 CHADLQ6NUI6 762 aa11.88□□□□□ -0.51
HMBOX1-204ENST00000517386 XRN1Q8IZH2 1706 aaKnown RBP11.88□□□□□ -0.51
HMBOX1-204ENST00000517386 SETBP1Q9Y6X0 1596 aa11.88□□□□□ -0.51
HMBOX1-204ENST00000517386 ADAMTS2O95450 1211 aa11.87□□□□□ -0.51
HMBOX1-204ENST00000517386 POTEGQ6S5H5 508 aa11.87□□□□□ -0.51
HMBOX1-204ENST00000517386 UPF1Q92900 1129 aaKnown RBP eCLIP11.87□□□□□ -0.51
HMBOX1-204ENST00000517386 SHPRHQ149N8 1683 aa11.87□□□□□ -0.51
HMBOX1-204ENST00000517386 ORAI2Q96SN7 254 aa11.86□□□□□ -0.51
HMBOX1-204ENST00000517386 SRCAPQ6ZRS2 3230 aa11.86□□□□□ -0.51
HMBOX1-204ENST00000517386 NEXMIFQ5QGS0 1516 aa11.86□□□□□ -0.51
HMBOX1-204ENST00000517386 NAIPQ13075 1403 aa11.86□□□□□ -0.51
HMBOX1-204ENST00000517386 LRRC59Q96AG4 307 aaKnown RBP11.85□□□□□ -0.51
HMBOX1-204ENST00000517386 DCCP43146 1447 aa11.85□□□□□ -0.51
HMBOX1-204ENST00000517386 ADGRL3Q9HAR2 1447 aa11.85□□□□□ -0.51
HMBOX1-204ENST00000517386 ROBO2Q9HCK4 1378 aa11.84□□□□□ -0.51
HMBOX1-204ENST00000517386 SPDYE1Q8NFV5 336 aaPredicted RBP11.84□□□□□ -0.51
HMBOX1-204ENST00000517386 NALCNQ8IZF0 1738 aa11.83□□□□□ -0.52
HMBOX1-204ENST00000517386 PNPLA6Q8IY17 1366 aa11.83□□□□□ -0.52
HMBOX1-204ENST00000517386 NUTM2FA1L443 756 aa11.83□□□□□ -0.52
HMBOX1-204ENST00000517386 OTUD5Q96G74 571 aa11.83□□□□□ -0.52
HMBOX1-204ENST00000517386 NGLY1Q96IV0 654 aa11.83□□□□□ -0.52
HMBOX1-204ENST00000517386 QTRT2Q9H974 415 aaKnown RBP11.83□□□□□ -0.52
HMBOX1-204ENST00000517386 SETD5Q9C0A6 1442 aa11.83□□□□□ -0.52
HMBOX1-204ENST00000517386 C1orf167Q5SNV9 1468 aa11.83□□□□□ -0.52
HMBOX1-204ENST00000517386 XPCQ01831 940 aaPredicted RBP11.82□□□□□ -0.52
HMBOX1-204ENST00000517386 STK26Q9P289 416 aa11.82□□□□□ -0.52
HMBOX1-204ENST00000517386 RRBP1Q9P2E9 1410 aaKnown RBP11.81□□□□□ -0.52
HMBOX1-204ENST00000517386 VGFO15240 615 aaPredicted RBP11.81□□□□□ -0.52
HMBOX1-204ENST00000517386 RGL3Q3MIN7 710 aa11.81□□□□□ -0.52
HMBOX1-204ENST00000517386 NHSL1Q5SYE7 1610 aa11.81□□□□□ -0.52
HMBOX1-204ENST00000517386 KIF1BO60333 1816 aa11.81□□□□□ -0.52
HMBOX1-204ENST00000517386 RGS12O14924 1447 aa11.79□□□□□ -0.52
HMBOX1-204ENST00000517386 PLEKHG5O94827 1062 aa11.79□□□□□ -0.52
HMBOX1-204ENST00000517386 RBM6P78332 1123 aaKnown RBP11.78□□□□□ -0.52
HMBOX1-204ENST00000517386 ESCO1Q5FWF5 840 aa11.78□□□□□ -0.52
HMBOX1-204ENST00000517386 WAPLQ7Z5K2 1190 aa11.78□□□□□ -0.52
HMBOX1-204ENST00000517386 FOXD4L1Q9NU39 408 aa11.78□□□□□ -0.52
HMBOX1-204ENST00000517386 ADGRF5Q8IZF2 1346 aa11.78□□□□□ -0.52
HMBOX1-204ENST00000517386 SPDYE2BA6NHP3 402 aa11.77□□□□□ -0.53
HMBOX1-204ENST00000517386 SPDYE6P0CI01 402 aa11.77□□□□□ -0.53
HMBOX1-204ENST00000517386 SPDYE2Q495Y8 402 aa11.77□□□□□ -0.53
HMBOX1-204ENST00000517386 TMEM132EQ6IEE7 984 aa11.77□□□□□ -0.53
HMBOX1-204ENST00000517386 USP21Q9UK80 565 aa11.77□□□□□ -0.53
HMBOX1-204ENST00000517386 PTCH1Q13635 1447 aa11.77□□□□□ -0.53
HMBOX1-204ENST00000517386 FOXO3O43524 673 aa11.76□□□□□ -0.53
HMBOX1-204ENST00000517386 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
HMBOX1-204ENST00000517386 SOS2Q07890 1332 aaPredicted RBP11.76□□□□□ -0.53
HMBOX1-204ENST00000517386 HFM1A2PYH4 1435 aa11.76□□□□□ -0.53
HMBOX1-204ENST00000517386 RPGRIP1LQ68CZ1 1315 aa11.75□□□□□ -0.53
HMBOX1-204ENST00000517386 EP400Q96L91 3159 aa11.74□□□□□ -0.53
HMBOX1-204ENST00000517386 PLEKHH1Q9ULM0 1364 aa11.74□□□□□ -0.53
HMBOX1-204ENST00000517386 CDK12Q9NYV4 1490 aaPredicted RBP11.74□□□□□ -0.53
HMBOX1-204ENST00000517386 ZBTB22O15209 634 aa11.73□□□□□ -0.53
HMBOX1-204ENST00000517386 PPLO60437 1756 aa11.73□□□□□ -0.53
HMBOX1-204ENST00000517386 SAFB2Q14151 953 aaKnown RBP eCLIP11.72□□□□□ -0.53
HMBOX1-204ENST00000517386 MPHOSPH9Q99550 1183 aa11.72□□□□□ -0.53
HMBOX1-204ENST00000517386 TRPC5Q9UL62 973 aaPredicted RBP11.72□□□□□ -0.53
HMBOX1-204ENST00000517386 CCDC144AA2RUR9 1427 aa11.71□□□□□ -0.53
HMBOX1-204ENST00000517386 NPHP3Q7Z494 1330 aa11.71□□□□□ -0.53
HMBOX1-204ENST00000517386 POTEB2H3BUK9 544 aa11.71□□□□□ -0.53
HMBOX1-204ENST00000517386 CD44P16070 742 aaKnown RBP11.71□□□□□ -0.53
HMBOX1-204ENST00000517386 FNBP4Q8N3X1 1017 aaPredicted RBP11.7□□□□□ -0.54
HMBOX1-204ENST00000517386 PXDNQ92626 1479 aa11.69□□□□□ -0.54
HMBOX1-204ENST00000517386 LRPPRCP42704 1394 aaKnown RBP11.68□□□□□ -0.54
HMBOX1-204ENST00000517386 ATAD2Q6PL18 1390 aa11.68□□□□□ -0.54
HMBOX1-204ENST00000517386 LAMC1P11047 1609 aa11.68□□□□□ -0.54
HMBOX1-204ENST00000517386 LMOD2Q6P5Q4 547 aa11.68□□□□□ -0.54
HMBOX1-204ENST00000517386 CABLES1Q8TDN4 633 aa11.68□□□□□ -0.54
HMBOX1-204ENST00000517386 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
HMBOX1-204ENST00000517386 MYOM2P54296 1465 aa11.68□□□□□ -0.54
HMBOX1-204ENST00000517386 ATRNO75882 1429 aa11.68□□□□□ -0.54
HMBOX1-204ENST00000517386 SPATA31E1Q6ZUB1 1445 aa11.68□□□□□ -0.54
HMBOX1-204ENST00000517386 CDC42BPGQ6DT37 1551 aa11.67□□□□□ -0.54
HMBOX1-204ENST00000517386 CFAP70Q5T0N1 1121 aa11.67□□□□□ -0.54
HMBOX1-204ENST00000517386 BCL9LQ86UU0 1499 aa11.67□□□□□ -0.54
HMBOX1-204ENST00000517386 PRAG1Q86YV5 1406 aa11.67□□□□□ -0.54
HMBOX1-204ENST00000517386 HAP1P54257 671 aaPredicted RBP11.66□□□□□ -0.54
HMBOX1-204ENST00000517386 KRT28Q7Z3Y7 464 aa11.66□□□□□ -0.54
HMBOX1-204ENST00000517386 ANKRD30BQ9BXX2 1392 aa11.66□□□□□ -0.54
HMBOX1-204ENST00000517386 COL22A1Q8NFW1 1626 aaPredicted RBP11.65□□□□□ -0.54
HMBOX1-204ENST00000517386 GJD4Q96KN9 370 aaPredicted RBP11.65□□□□□ -0.54
HMBOX1-204ENST00000517386 YTHDC2Q9H6S0 1430 aaKnown RBP11.65□□□□□ -0.54
HMBOX1-204ENST00000517386 ABCC11Q96J66 1382 aa11.65□□□□□ -0.55
HMBOX1-204ENST00000517386 SPATA31A3Q5VYP0 1347 aa11.64□□□□□ -0.55
HMBOX1-204ENST00000517386 PIK3C2GO75747 1445 aa11.64□□□□□ -0.55
HMBOX1-204ENST00000517386 PMFBP1Q8TBY8 1022 aa11.64□□□□□ -0.55
HMBOX1-204ENST00000517386 PRAM1Q96QH2 718 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms