RNA–Protein interactions for RNA: ENST00000517373.1

EBF1-203, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 2,277 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-203ENST00000517373 SLKQ9H2G2 1235 aaPredicted RBP9.57□□□□□ -0.88
EBF1-203ENST00000517373 SMC4Q9NTJ3 1288 aa9.57□□□□□ -0.88
EBF1-203ENST00000517373 PTPRGP23470 1445 aa9.56□□□□□ -0.88
EBF1-203ENST00000517373 CARMIL2Q6F5E8 1435 aa9.56□□□□□ -0.88
EBF1-203ENST00000517373 SHROOM2Q13796 1616 aa9.56□□□□□ -0.88
EBF1-203ENST00000517373 SAMD9Q5K651 1589 aa9.56□□□□□ -0.88
EBF1-203ENST00000517373 PLB1Q6P1J6 1458 aa9.56□□□□□ -0.88
EBF1-203ENST00000517373 NLRP1Q9C000 1473 aa9.56□□□□□ -0.88
EBF1-203ENST00000517373 KIAA1107Q9UPP5 1409 aa9.56□□□□□ -0.88
EBF1-203ENST00000517373 ZMYM3Q14202 1370 aa9.56□□□□□ -0.88
EBF1-203ENST00000517373 SLFN14P0C7P3 912 aa9.56□□□□□ -0.88
EBF1-203ENST00000517373 GAS2L3Q86XJ1 694 aa9.56□□□□□ -0.88
EBF1-203ENST00000517373 PDCL2Q8N4E4 241 aa9.56□□□□□ -0.88
EBF1-203ENST00000517373 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.56□□□□□ -0.88
EBF1-203ENST00000517373 LOC102724159A0A0B4J2E5 919 aa9.55□□□□□ -0.88
EBF1-203ENST00000517373 CCDC172P0C7W6 258 aa9.55□□□□□ -0.88
EBF1-203ENST00000517373 XPCQ01831 940 aaPredicted RBP9.55□□□□□ -0.88
EBF1-203ENST00000517373 PWP2Q15269 919 aaKnown RBP9.55□□□□□ -0.88
EBF1-203ENST00000517373 NBPF11Q86T75 865 aa9.55□□□□□ -0.88
EBF1-203ENST00000517373 ZNF592Q92610 1267 aa9.55□□□□□ -0.88
EBF1-203ENST00000517373 KIAA0556O60303 1618 aa9.55□□□□□ -0.88
EBF1-203ENST00000517373 FEZ2Q9UHY8 353 aaPredicted RBP9.54□□□□□ -0.88
EBF1-203ENST00000517373 KIF1CO43896 1103 aaKnown RBP9.53□□□□□ -0.88
EBF1-203ENST00000517373 SIRT1Q96EB6 747 aa9.53□□□□□ -0.88
EBF1-203ENST00000517373 UPF2Q9HAU5 1272 aaKnown RBP9.53□□□□□ -0.88
EBF1-203ENST00000517373 CCDC39Q9UFE4 941 aa9.53□□□□□ -0.88
EBF1-203ENST00000517373 CCDC7Q96M83 1385 aa9.53□□□□□ -0.88
EBF1-203ENST00000517373 TTC36A6NLP5 189 aa9.53□□□□□ -0.88
EBF1-203ENST00000517373 NOP2P46087 812 aaKnown RBP9.53□□□□□ -0.88
EBF1-203ENST00000517373 ANKRD7Q92527 254 aa9.53□□□□□ -0.88
EBF1-203ENST00000517373 RBM28Q9NW13 759 aaKnown RBP9.53□□□□□ -0.88
EBF1-203ENST00000517373 EFCAB5A4FU69 1503 aa9.53□□□□□ -0.88
EBF1-203ENST00000517373 KDM5BQ9UGL1 1544 aa9.53□□□□□ -0.88
EBF1-203ENST00000517373 NPM1P06748 294 aaKnown RBP eCLIP9.52□□□□□ -0.89
EBF1-203ENST00000517373 TNNT3P45378 269 aaPredicted RBP9.52□□□□□ -0.89
EBF1-203ENST00000517373 GTF2A1P52655 376 aaPredicted RBP9.52□□□□□ -0.89
EBF1-203ENST00000517373 MAP2K1Q02750 393 aaPredicted RBP9.52□□□□□ -0.89
EBF1-203ENST00000517373 PANK3Q9H999 370 aa9.52□□□□□ -0.89
EBF1-203ENST00000517373 KIF16BQ96L93 1317 aa9.52□□□□□ -0.89
EBF1-203ENST00000517373 ARHGAP31Q2M1Z3 1444 aa9.52□□□□□ -0.89
EBF1-203ENST00000517373 PRR29P0C7W0 189 aa9.52□□□□□ -0.89
EBF1-203ENST00000517373 PUS7Q96PZ0 661 aaKnown RBP9.52□□□□□ -0.89
EBF1-203ENST00000517373 BSDC1Q9NW68 430 aaPredicted RBP9.52□□□□□ -0.89
EBF1-203ENST00000517373 SH3BP1Q9Y3L3 701 aa9.52□□□□□ -0.89
EBF1-203ENST00000517373 LRPPRCP42704 1394 aaKnown RBP9.52□□□□□ -0.89
EBF1-203ENST00000517373 FMN1Q68DA7 1419 aa9.51□□□□□ -0.89
EBF1-203ENST00000517373 ARHGEF11O15085 1522 aa9.51□□□□□ -0.89
EBF1-203ENST00000517373 SYCP1Q15431 976 aa9.51□□□□□ -0.89
EBF1-203ENST00000517373 TERF2Q15554 542 aa9.51□□□□□ -0.89
EBF1-203ENST00000517373 NBPF9Q3BBW0 867 aa9.51□□□□□ -0.89
EBF1-203ENST00000517373 PSMD1Q99460 953 aa9.51□□□□□ -0.89
EBF1-203ENST00000517373 RIMBP3CA6NJZ7 1639 aa9.51□□□□□ -0.89
EBF1-203ENST00000517373 RIMBP3BA6NNM3 1639 aa9.51□□□□□ -0.89
EBF1-203ENST00000517373 RIMBP3Q9UFD9 1639 aa9.51□□□□□ -0.89
EBF1-203ENST00000517373 CT47A1Q5JQC4 288 aaPredicted RBP9.51□□□□□ -0.89
EBF1-203ENST00000517373 ICE2Q659A1 982 aa9.51□□□□□ -0.89
EBF1-203ENST00000517373 CHMP4CQ96CF2 233 aa9.51□□□□□ -0.89
EBF1-203ENST00000517373 SLC26A8Q96RN1 970 aa9.51□□□□□ -0.89
EBF1-203ENST00000517373 TBC1D2Q9BYX2 928 aa9.51□□□□□ -0.89
EBF1-203ENST00000517373 DONSONQ9NYP3 566 aa9.51□□□□□ -0.89
EBF1-203ENST00000517373 CIZ1Q9ULV3 898 aaPredicted RBP9.51□□□□□ -0.89
EBF1-203ENST00000517373 ROCK2O75116 1388 aaKnown RBP9.5□□□□□ -0.89
EBF1-203ENST00000517373 MNS1Q8NEH6 495 aa9.5□□□□□ -0.89
EBF1-203ENST00000517373 GBP4Q96PP9 640 aa9.5□□□□□ -0.89
EBF1-203ENST00000517373 CASKIN1Q8WXD9 1431 aa9.5□□□□□ -0.89
EBF1-203ENST00000517373 GUCY2CP25092 1073 aa9.49□□□□□ -0.89
EBF1-203ENST00000517373 KIAA2012Q0VF49 1180 aa9.49□□□□□ -0.89
EBF1-203ENST00000517373 PCF11O94913 1555 aaKnown RBP9.49□□□□□ -0.89
EBF1-203ENST00000517373 ZNF445P59923 1031 aa9.49□□□□□ -0.89
EBF1-203ENST00000517373 NCOA3Q9Y6Q9 1424 aa9.49□□□□□ -0.89
EBF1-203ENST00000517373 GOLIM4O00461 696 aa9.48□□□□□ -0.89
EBF1-203ENST00000517373 HSPA5P11021 654 aaKnown RBP9.48□□□□□ -0.89
EBF1-203ENST00000517373 EIF4G2P78344 907 aaKnown RBP eCLIP9.48□□□□□ -0.89
EBF1-203ENST00000517373 TBC1D32Q96NH3 1257 aa9.48□□□□□ -0.89
EBF1-203ENST00000517373 INSRP06213 1382 aa9.48□□□□□ -0.89
EBF1-203ENST00000517373 SPDYE4A6NLX3 237 aa9.48□□□□□ -0.89
EBF1-203ENST00000517373 DHX16O60231 1041 aaKnown RBP9.48□□□□□ -0.89
EBF1-203ENST00000517373 NBPF10Q6P3W6 841 aaKnown RBP9.48□□□□□ -0.89
EBF1-203ENST00000517373 BCL2L12Q9HB09 334 aa9.48□□□□□ -0.89
EBF1-203ENST00000517373 MORC2Q9Y6X9 1032 aaPredicted RBP9.48□□□□□ -0.89
EBF1-203ENST00000517373 NUP153P49790 1475 aaKnown RBP9.48□□□□□ -0.89
EBF1-203ENST00000517373 MAPK8IP3Q9UPT6 1336 aa9.48□□□□□ -0.89
EBF1-203ENST00000517373 CDK13Q14004 1512 aaKnown RBP9.47□□□□□ -0.89
EBF1-203ENST00000517373 ZMYM4Q5VZL5 1548 aa9.47□□□□□ -0.89
EBF1-203ENST00000517373 NPC1L1Q9UHC9 1359 aa9.47□□□□□ -0.89
EBF1-203ENST00000517373 UACAQ9BZF9 1416 aa9.47□□□□□ -0.89
EBF1-203ENST00000517373 SSR1P43307 286 aaKnown RBP9.47□□□□□ -0.89
EBF1-203ENST00000517373 PNISRQ8TF01 805 aaKnown RBP9.47□□□□□ -0.89
EBF1-203ENST00000517373 RASSF4Q9H2L5 321 aa9.47□□□□□ -0.89
EBF1-203ENST00000517373 CRBNQ96SW2 442 aa9.47□□□□□ -0.89
EBF1-203ENST00000517373 MED4Q9NPJ6 270 aa9.47□□□□□ -0.89
EBF1-203ENST00000517373 SPINK5Q9NQ38 1064 aaPredicted RBP9.47□□□□□ -0.89
EBF1-203ENST00000517373 ATP10BO94823 1461 aa9.46□□□□□ -0.89
EBF1-203ENST00000517373 DCAF8L1A6NGE4 600 aa9.46□□□□□ -0.9
EBF1-203ENST00000517373 IRF6O14896 467 aa9.46□□□□□ -0.9
EBF1-203ENST00000517373 CTIFO43310 598 aaKnown RBP9.46□□□□□ -0.9
EBF1-203ENST00000517373 CALRP27797 417 aaKnown RBP9.46□□□□□ -0.9
EBF1-203ENST00000517373 ZKSCAN8Q15776 578 aaPredicted RBP9.46□□□□□ -0.9
EBF1-203ENST00000517373 DDX41Q9UJV9 622 aaKnown RBP9.46□□□□□ -0.9
EBF1-203ENST00000517373 DDIT3P35638 169 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms