RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 SREK1Q8WXA9 508 aaKnown RBP4.08□□□□□ -1.76
SCARNA11.3-201ENST00000517276 SIRT1Q96EB6 747 aa4.08□□□□□ -1.76
SCARNA11.3-201ENST00000517276 CDCA7LQ96GN5 454 aa4.08□□□□□ -1.76
SCARNA11.3-201ENST00000517276 DRC1Q96MC2 740 aa4.08□□□□□ -1.76
SCARNA11.3-201ENST00000517276 PCDHGC3Q9UN70 934 aa4.08□□□□□ -1.76
SCARNA11.3-201ENST00000517276 NOVA2Q9UNW9 492 aaKnown RBP4.08□□□□□ -1.76
SCARNA11.3-201ENST00000517276 ANKRD33BA6NCL7 494 aa4.07□□□□□ -1.76
SCARNA11.3-201ENST00000517276 FDX1P10109 184 aa4.07□□□□□ -1.76
SCARNA11.3-201ENST00000517276 SSFA2P28290 1259 aa4.07□□□□□ -1.76
SCARNA11.3-201ENST00000517276 GJA5P36382 358 aa4.07□□□□□ -1.76
SCARNA11.3-201ENST00000517276 MARSP56192 900 aaKnown RBP4.07□□□□□ -1.76
SCARNA11.3-201ENST00000517276 MYT1Q01538 1121 aa4.07□□□□□ -1.76
SCARNA11.3-201ENST00000517276 NR6A1Q15406 480 aa4.07□□□□□ -1.76
SCARNA11.3-201ENST00000517276 NPAS4Q8IUM7 802 aa4.07□□□□□ -1.76
SCARNA11.3-201ENST00000517276 CERKQ8TCT0 537 aa4.07□□□□□ -1.76
SCARNA11.3-201ENST00000517276 EYA1Q99502 592 aa4.07□□□□□ -1.76
SCARNA11.3-201ENST00000517276 BIN2Q9UBW5 565 aaPredicted RBP4.07□□□□□ -1.76
SCARNA11.3-201ENST00000517276 CFAP99D6REC4 459 aa4.06□□□□□ -1.76
SCARNA11.3-201ENST00000517276 HOXA2O43364 376 aa4.06□□□□□ -1.76
SCARNA11.3-201ENST00000517276 KDM4AO75164 1064 aa4.06□□□□□ -1.76
SCARNA11.3-201ENST00000517276 ERCC3P19447 782 aa4.06□□□□□ -1.76
SCARNA11.3-201ENST00000517276 ARID4AP29374 1257 aaPredicted RBP4.06□□□□□ -1.76
SCARNA11.3-201ENST00000517276 SOX11P35716 441 aa4.06□□□□□ -1.76
SCARNA11.3-201ENST00000517276 FOSBP53539 338 aa4.06□□□□□ -1.76
SCARNA11.3-201ENST00000517276 ELOAQ14241 798 aaKnown RBP4.06□□□□□ -1.76
SCARNA11.3-201ENST00000517276 SULF1Q8IWU6 871 aa4.06□□□□□ -1.76
SCARNA11.3-201ENST00000517276 DEPDC4Q8N2C3 294 aa4.06□□□□□ -1.76
SCARNA11.3-201ENST00000517276 RDH13Q8NBN7 331 aa4.06□□□□□ -1.76
SCARNA11.3-201ENST00000517276 JPH4Q96JJ6 628 aa4.06□□□□□ -1.76
SCARNA11.3-201ENST00000517276 ADAM33Q9BZ11 813 aa4.06□□□□□ -1.76
SCARNA11.3-201ENST00000517276 RBM27Q9P2N5 1060 aaKnown RBP4.06□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L3A6NCW0 530 aa4.05□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L4A6NCW7 530 aa4.05□□□□□ -1.76
SCARNA11.3-201ENST00000517276 SLC34A2O95436 690 aa4.05□□□□□ -1.76
SCARNA11.3-201ENST00000517276 RECKO95980 971 aa4.05□□□□□ -1.76
SCARNA11.3-201ENST00000517276 PLCG2P16885 1265 aa4.05□□□□□ -1.76
SCARNA11.3-201ENST00000517276 CRTC2Q53ET0 693 aaPredicted RBP4.05□□□□□ -1.76
SCARNA11.3-201ENST00000517276 NAALADL2Q58DX5 795 aa4.05□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L2Q6R6M4 530 aa4.05□□□□□ -1.76
SCARNA11.3-201ENST00000517276 NUDT18Q6ZVK8 323 aa4.05□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L1Q7RTZ2 530 aa4.05□□□□□ -1.76
SCARNA11.3-201ENST00000517276 ZNF454Q8N9F8 522 aa4.05□□□□□ -1.76
SCARNA11.3-201ENST00000517276 HELBQ8NG08 1087 aaPredicted RBP4.05□□□□□ -1.76
SCARNA11.3-201ENST00000517276 SPATA32Q96LK8 384 aa4.05□□□□□ -1.76
SCARNA11.3-201ENST00000517276 C8orf37Q96NL8 207 aa4.05□□□□□ -1.76
SCARNA11.3-201ENST00000517276 PCDHGA4Q9Y5G9 962 aa4.05□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L15C9J2P7 530 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L10C9JJH3 530 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L13C9JLJ4 530 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L12C9JPN9 530 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L11C9JVI0 530 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L21D6R901 530 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L18D6R9N7 530 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L22D6RA61 530 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L17D6RBQ6 530 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L19D6RCP7 530 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L20D6RJB6 530 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 C7P10643 843 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 SKIP12755 728 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 FAM69CQ0P6D2 419 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L24Q0WX57 530 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 ZDHHC16Q969W1 377 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 POLR3GLQ9BT43 218 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 TSKSQ9UJT2 592 aa4.04□□□□□ -1.76
SCARNA11.3-201ENST00000517276 USP17L5A8MUK1 530 aa4.03□□□□□ -1.76
SCARNA11.3-201ENST00000517276 SMAPO00193 183 aa4.03□□□□□ -1.76
SCARNA11.3-201ENST00000517276 PER1O15534 1290 aaPredicted RBP4.03□□□□□ -1.76
SCARNA11.3-201ENST00000517276 COL9A1P20849 921 aa4.03□□□□□ -1.76
SCARNA11.3-201ENST00000517276 ATP2B4P23634 1241 aa4.03□□□□□ -1.76
SCARNA11.3-201ENST00000517276 DNAJB2P25686 324 aa4.03□□□□□ -1.76
SCARNA11.3-201ENST00000517276 ZC3H6P61129 1189 aaKnown RBP4.03□□□□□ -1.76
SCARNA11.3-201ENST00000517276 MTMR2Q13614 643 aa4.03□□□□□ -1.76
SCARNA11.3-201ENST00000517276 CHRDL2Q6WN34 429 aa4.03□□□□□ -1.76
SCARNA11.3-201ENST00000517276 FAM174AQ8TBP5 190 aa4.03□□□□□ -1.76
SCARNA11.3-201ENST00000517276 SYMPKQ92797 1274 aaKnown RBP4.03□□□□□ -1.76
SCARNA11.3-201ENST00000517276 TMEM134Q9H6X4 195 aa4.03□□□□□ -1.76
SCARNA11.3-201ENST00000517276 CWC22Q9HCG8 908 aaKnown RBP4.03□□□□□ -1.76
SCARNA11.3-201ENST00000517276 ANO2Q9NQ90 1003 aa4.03□□□□□ -1.76
SCARNA11.3-201ENST00000517276 PNMA3Q9UL41 463 aa4.03□□□□□ -1.76
SCARNA11.3-201ENST00000517276 TTBK1Q5TCY1 1321 aaPredicted RBP4.02□□□□□ -1.77
SCARNA11.3-201ENST00000517276 KDM4FA0A1W2PPD8 638 aa4.02□□□□□ -1.77
SCARNA11.3-201ENST00000517276 ATMINO43313 823 aaPredicted RBP4.02□□□□□ -1.77
SCARNA11.3-201ENST00000517276 EIF4G2P78344 907 aaKnown RBP eCLIP4.02□□□□□ -1.77
SCARNA11.3-201ENST00000517276 ZNF211Q13398 564 aaPredicted RBP4.02□□□□□ -1.77
SCARNA11.3-201ENST00000517276 TSNAXIP1Q2TAA8 658 aa4.02□□□□□ -1.77
SCARNA11.3-201ENST00000517276 ZNF326Q5BKZ1 582 aaKnown RBP4.02□□□□□ -1.77
SCARNA11.3-201ENST00000517276 C9orf131Q5VYM1 1079 aa4.02□□□□□ -1.77
SCARNA11.3-201ENST00000517276 FBXO33Q7Z6M2 555 aa4.02□□□□□ -1.77
SCARNA11.3-201ENST00000517276 SLF2Q8IX21 1173 aa4.02□□□□□ -1.77
SCARNA11.3-201ENST00000517276 DHX37Q8IY37 1157 aaKnown RBP4.02□□□□□ -1.77
SCARNA11.3-201ENST00000517276 CLP1Q92989 425 aaKnown RBP4.02□□□□□ -1.77
SCARNA11.3-201ENST00000517276 MKRN1Q9UHC7 482 aaKnown RBP4.02□□□□□ -1.77
SCARNA11.3-201ENST00000517276 C19orf67A6NJJ6 358 aa4.01□□□□□ -1.77
SCARNA11.3-201ENST00000517276 FAM196BA6NMK8 535 aa4.01□□□□□ -1.77
SCARNA11.3-201ENST00000517276 C6orf229H3BNL8 230 aa4.01□□□□□ -1.77
SCARNA11.3-201ENST00000517276 ABL1P00519 1130 aa4.01□□□□□ -1.77
SCARNA11.3-201ENST00000517276 FBXO45P0C2W1 286 aa4.01□□□□□ -1.77
SCARNA11.3-201ENST00000517276 RASA1P20936 1047 aa4.01□□□□□ -1.77
SCARNA11.3-201ENST00000517276 VAMP1P23763 118 aa4.01□□□□□ -1.77
SCARNA11.3-201ENST00000517276 GCGRP47871 477 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms