RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 LRPPRCP42704 1394 aaKnown RBP21.75■■□□□ 1.07
SCARNA20.5-201ENST00000516991 C8orf37Q96NL8 207 aa21.75■■□□□ 1.07
SCARNA20.5-201ENST00000516991 ORAI2Q96SN7 254 aa21.75■■□□□ 1.07
SCARNA20.5-201ENST00000516991 PIK3C2GO75747 1445 aa21.74■■□□□ 1.07
SCARNA20.5-201ENST00000516991 COL22A1Q8NFW1 1626 aaPredicted RBP21.74■■□□□ 1.07
SCARNA20.5-201ENST00000516991 RGL3Q3MIN7 710 aa21.74■■□□□ 1.07
SCARNA20.5-201ENST00000516991 NPHP3Q7Z494 1330 aa21.73■■□□□ 1.07
SCARNA20.5-201ENST00000516991 ABCC11Q96J66 1382 aa21.73■■□□□ 1.07
SCARNA20.5-201ENST00000516991 UPF1Q92900 1129 aaKnown RBP eCLIP21.7■■□□□ 1.06
SCARNA20.5-201ENST00000516991 RBM6P78332 1123 aaKnown RBP21.69■■□□□ 1.06
SCARNA20.5-201ENST00000516991 PXDNQ92626 1479 aa21.69■■□□□ 1.06
SCARNA20.5-201ENST00000516991 ADAMTS2O95450 1211 aa21.68■■□□□ 1.06
SCARNA20.5-201ENST00000516991 ESCO1Q5FWF5 840 aa21.68■■□□□ 1.06
SCARNA20.5-201ENST00000516991 NGLY1Q96IV0 654 aa21.68■■□□□ 1.06
SCARNA20.5-201ENST00000516991 QTRT2Q9H974 415 aaKnown RBP21.68■■□□□ 1.06
SCARNA20.5-201ENST00000516991 STK26Q9P289 416 aa21.68■■□□□ 1.06
SCARNA20.5-201ENST00000516991 RGS12O14924 1447 aa21.68■■□□□ 1.06
SCARNA20.5-201ENST00000516991 MYOM2P54296 1465 aa21.68■■□□□ 1.06
SCARNA20.5-201ENST00000516991 FMN2Q9NZ56 1722 aa21.67■■□□□ 1.06
SCARNA20.5-201ENST00000516991 YTHDC2Q9H6S0 1430 aaKnown RBP21.67■■□□□ 1.06
SCARNA20.5-201ENST00000516991 KIF1AQ12756 1690 aa21.66■■□□□ 1.06
SCARNA20.5-201ENST00000516991 NRXN1Q9ULB1 1477 aa21.65■■□□□ 1.06
SCARNA20.5-201ENST00000516991 TMEM132EQ6IEE7 984 aa21.64■■□□□ 1.05
SCARNA20.5-201ENST00000516991 WAPLQ7Z5K2 1190 aa21.64■■□□□ 1.05
SCARNA20.5-201ENST00000516991 PLEKHH1Q9ULM0 1364 aa21.63■■□□□ 1.05
SCARNA20.5-201ENST00000516991 SIRT1Q96EB6 747 aa21.63■■□□□ 1.05
SCARNA20.5-201ENST00000516991 MARF1Q9Y4F3 1742 aaKnown RBP21.63■■□□□ 1.05
SCARNA20.5-201ENST00000516991 USP21Q9UK80 565 aa21.62■■□□□ 1.05
SCARNA20.5-201ENST00000516991 FNBP4Q8N3X1 1017 aaPredicted RBP21.61■■□□□ 1.05
SCARNA20.5-201ENST00000516991 C14orf93Q9H972 538 aaKnown RBP21.61■■□□□ 1.05
SCARNA20.5-201ENST00000516991 TRPC5Q9UL62 973 aaPredicted RBP21.61■■□□□ 1.05
SCARNA20.5-201ENST00000516991 DHX57Q6P158 1386 aaKnown RBP21.61■■□□□ 1.05
SCARNA20.5-201ENST00000516991 FOXO3O43524 673 aa21.6■■□□□ 1.05
SCARNA20.5-201ENST00000516991 RAB3GAP2Q9H2M9 1393 aa21.6■■□□□ 1.05
SCARNA20.5-201ENST00000516991 ATRNO75882 1429 aa21.59■■□□□ 1.05
SCARNA20.5-201ENST00000516991 DLC1Q96QB1 1528 aa21.57■■□□□ 1.04
SCARNA20.5-201ENST00000516991 NUTM2FA1L443 756 aa21.57■■□□□ 1.04
SCARNA20.5-201ENST00000516991 XPCQ01831 940 aaPredicted RBP21.56■■□□□ 1.04
SCARNA20.5-201ENST00000516991 ATAD2Q6PL18 1390 aa21.56■■□□□ 1.04
SCARNA20.5-201ENST00000516991 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.55■■□□□ 1.04
SCARNA20.5-201ENST00000516991 CFAP70Q5T0N1 1121 aa21.54■■□□□ 1.04
SCARNA20.5-201ENST00000516991 SPATA31A3Q5VYP0 1347 aa21.54■■□□□ 1.04
SCARNA20.5-201ENST00000516991 ADGRB2O60241 1585 aa21.53■■□□□ 1.04
SCARNA20.5-201ENST00000516991 BCL9LQ86UU0 1499 aa21.52■■□□□ 1.04
SCARNA20.5-201ENST00000516991 RGPD8O14715 1765 aaPredicted RBP21.52■■□□□ 1.04
SCARNA20.5-201ENST00000516991 USP32Q8NFA0 1604 aa21.51■■□□□ 1.03
SCARNA20.5-201ENST00000516991 TNS3Q68CZ2 1445 aa21.51■■□□□ 1.03
SCARNA20.5-201ENST00000516991 ANKARQ7Z5J8 1434 aa21.51■■□□□ 1.03
SCARNA20.5-201ENST00000516991 ADGRB1O14514 1584 aa21.5■■□□□ 1.03
SCARNA20.5-201ENST00000516991 KRT28Q7Z3Y7 464 aa21.5■■□□□ 1.03
SCARNA20.5-201ENST00000516991 PRAM1Q96QH2 718 aa21.5■■□□□ 1.03
SCARNA20.5-201ENST00000516991 PHF8Q9UPP1 1060 aa21.5■■□□□ 1.03
SCARNA20.5-201ENST00000516991 PSME1Q06323 249 aa21.49■■□□□ 1.03
SCARNA20.5-201ENST00000516991 SBNO1A3KN83 1393 aa21.48■■□□□ 1.03
SCARNA20.5-201ENST00000516991 SLIT2O94813 1529 aa21.47■■□□□ 1.03
SCARNA20.5-201ENST00000516991 STAC3Q96MF2 364 aa21.47■■□□□ 1.03
SCARNA20.5-201ENST00000516991 POGKQ9P215 609 aa21.47■■□□□ 1.03
SCARNA20.5-201ENST00000516991 EIF3AQ14152 1382 aaKnown RBP21.47■■□□□ 1.03
SCARNA20.5-201ENST00000516991 ARHGEF10O15013 1369 aa21.46■■□□□ 1.03
SCARNA20.5-201ENST00000516991 SAFB2Q14151 953 aaKnown RBP eCLIP21.45■■□□□ 1.02
SCARNA20.5-201ENST00000516991 GJD4Q96KN9 370 aaPredicted RBP21.45■■□□□ 1.02
SCARNA20.5-201ENST00000516991 ABCA3Q99758 1704 aa21.45■■□□□ 1.02
SCARNA20.5-201ENST00000516991 HAP1P54257 671 aaPredicted RBP21.44■■□□□ 1.02
SCARNA20.5-201ENST00000516991 UNC5CLQ8IV45 518 aa21.44■■□□□ 1.02
SCARNA20.5-201ENST00000516991 HRCP23327 699 aa21.43■■□□□ 1.02
SCARNA20.5-201ENST00000516991 NWD2Q9ULI1 1742 aa21.43■■□□□ 1.02
SCARNA20.5-201ENST00000516991 GLI3P10071 1580 aa21.41■■□□□ 1.02
SCARNA20.5-201ENST00000516991 TULP4Q9NRJ4 1543 aa21.41■■□□□ 1.02
SCARNA20.5-201ENST00000516991 RALGAPBQ86X10 1494 aa21.41■■□□□ 1.02
SCARNA20.5-201ENST00000516991 PLCH1Q4KWH8 1693 aa21.4■■□□□ 1.02
SCARNA20.5-201ENST00000516991 TRAK1Q9UPV9 953 aa21.4■■□□□ 1.02
SCARNA20.5-201ENST00000516991 TRPM3Q9HCF6 1732 aaPredicted RBP21.39■■□□□ 1.01
SCARNA20.5-201ENST00000516991 DCAF11Q8TEB1 546 aa21.39■■□□□ 1.01
SCARNA20.5-201ENST00000516991 CCDC125Q86Z20 511 aa21.38■■□□□ 1.01
SCARNA20.5-201ENST00000516991 LMOD2Q6P5Q4 547 aa21.37■■□□□ 1.01
SCARNA20.5-201ENST00000516991 KDM2AQ9Y2K7 1162 aa21.37■■□□□ 1.01
SCARNA20.5-201ENST00000516991 GPRASP1Q5JY77 1395 aa21.36■■□□□ 1.01
SCARNA20.5-201ENST00000516991 ARHGEF28Q8N1W1 1705 aaKnown RBP21.36■■□□□ 1.01
SCARNA20.5-201ENST00000516991 EP400Q96L91 3159 aa21.36■■□□□ 1.01
SCARNA20.5-201ENST00000516991 ALS2Q96Q42 1657 aa21.36■■□□□ 1.01
SCARNA20.5-201ENST00000516991 ITSN1Q15811 1721 aa21.35■■□□□ 1.01
SCARNA20.5-201ENST00000516991 MINK1Q8N4C8 1332 aaPredicted RBP21.35■■□□□ 1.01
SCARNA20.5-201ENST00000516991 PMFBP1Q8TBY8 1022 aa21.35■■□□□ 1.01
SCARNA20.5-201ENST00000516991 CABLES1Q8TDN4 633 aa21.35■■□□□ 1.01
SCARNA20.5-201ENST00000516991 HIRIP3Q9BW71 556 aaPredicted RBP21.35■■□□□ 1.01
SCARNA20.5-201ENST00000516991 VPS72Q15906 364 aa21.34■■□□□ 1.01
SCARNA20.5-201ENST00000516991 WASLO00401 505 aaPredicted RBP21.33■■□□□ 1.01
SCARNA20.5-201ENST00000516991 PRR36Q9H6K5 1346 aa21.32■■□□□ 1
SCARNA20.5-201ENST00000516991 BRWD3Q6RI45 1802 aa21.32■■□□□ 1
SCARNA20.5-201ENST00000516991 NRAPQ86VF7 1730 aa21.31■■□□□ 1
SCARNA20.5-201ENST00000516991 KIAA1210Q9ULL0 1709 aa21.31■■□□□ 1
SCARNA20.5-201ENST00000516991 COL14A1Q05707 1796 aaKnown RBP21.31■■□□□ 1
SCARNA20.5-201ENST00000516991 BLMP54132 1417 aaPredicted RBP21.3■■□□□ 1
SCARNA20.5-201ENST00000516991 ATP7BP35670 1465 aa21.29■■□□□ 1
SCARNA20.5-201ENST00000516991 PLEKHG5O94827 1062 aa21.29■■□□□ 1
SCARNA20.5-201ENST00000516991 CCDC9Q9Y3X0 531 aaKnown RBP21.29■■□□□ 1
SCARNA20.5-201ENST00000516991 NGDNQ8NEJ9 315 aaKnown RBP21.28■■□□□ 1
SCARNA20.5-201ENST00000516991 ZRANB1Q9UGI0 708 aa21.28■■□□□ 1
SCARNA20.5-201ENST00000516991 CRYBG1Q9Y4K1 1723 aa21.28■■□□□ 1
SCARNA20.5-201ENST00000516991 SEPT12Q8IYM1 358 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms