RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 PRDM9Q9NQV7 894 aa7.17□□□□□ -1.26
RNU6-1088P-201ENST00000516850 TRIM66O15016 1216 aa7.16□□□□□ -1.26
RNU6-1088P-201ENST00000516850 FDX1P10109 184 aa7.16□□□□□ -1.26
RNU6-1088P-201ENST00000516850 DIXDC1Q155Q3 683 aa7.16□□□□□ -1.26
RNU6-1088P-201ENST00000516850 HLA-CQ95604 372 aa7.16□□□□□ -1.26
RNU6-1088P-201ENST00000516850 C6orf229H3BNL8 230 aa7.15□□□□□ -1.26
RNU6-1088P-201ENST00000516850 SLC24A1O60721 1099 aa7.15□□□□□ -1.26
RNU6-1088P-201ENST00000516850 MMP16P51512 607 aa7.15□□□□□ -1.26
RNU6-1088P-201ENST00000516850 PRR20EP86478 221 aa7.15□□□□□ -1.26
RNU6-1088P-201ENST00000516850 PRR20CP86479 221 aa7.15□□□□□ -1.26
RNU6-1088P-201ENST00000516850 PRR20DP86480 221 aa7.15□□□□□ -1.26
RNU6-1088P-201ENST00000516850 PRR20BP86481 221 aa7.15□□□□□ -1.26
RNU6-1088P-201ENST00000516850 PRR20AP86496 221 aa7.15□□□□□ -1.26
RNU6-1088P-201ENST00000516850 GUCA2AQ02747 115 aa7.15□□□□□ -1.26
RNU6-1088P-201ENST00000516850 FOXC1Q12948 553 aa7.15□□□□□ -1.26
RNU6-1088P-201ENST00000516850 PKDCCQ504Y2 493 aa7.15□□□□□ -1.26
RNU6-1088P-201ENST00000516850 BCANQ96GW7 911 aa7.15□□□□□ -1.26
RNU6-1088P-201ENST00000516850 TNFRSF10AO00220 468 aa7.14□□□□□ -1.27
RNU6-1088P-201ENST00000516850 CCDC24Q8N4L8 307 aa7.14□□□□□ -1.27
RNU6-1088P-201ENST00000516850 SPIRE2Q8WWL2 714 aa7.14□□□□□ -1.27
RNU6-1088P-201ENST00000516850 BEGAINQ9BUH8 593 aa7.14□□□□□ -1.27
RNU6-1088P-201ENST00000516850 GDF9O60383 454 aa7.13□□□□□ -1.27
RNU6-1088P-201ENST00000516850 TRIM67Q6ZTA4 783 aa7.13□□□□□ -1.27
RNU6-1088P-201ENST00000516850 RETREG3Q86VR2 466 aa7.13□□□□□ -1.27
RNU6-1088P-201ENST00000516850 DGAT1O75907 488 aa7.12□□□□□ -1.27
RNU6-1088P-201ENST00000516850 DXOO77932 396 aaKnown RBP7.12□□□□□ -1.27
RNU6-1088P-201ENST00000516850 PARP9Q8IXQ6 854 aa7.12□□□□□ -1.27
RNU6-1088P-201ENST00000516850 SYMPKQ92797 1274 aaKnown RBP7.12□□□□□ -1.27
RNU6-1088P-201ENST00000516850 SLC24A3Q9HC58 644 aa7.12□□□□□ -1.27
RNU6-1088P-201ENST00000516850 FAM187AA6NFU0 413 aa7.11□□□□□ -1.27
RNU6-1088P-201ENST00000516850 JUNDP17535 347 aa7.11□□□□□ -1.27
RNU6-1088P-201ENST00000516850 NDUFV2P19404 249 aa7.11□□□□□ -1.27
RNU6-1088P-201ENST00000516850 MOXD2PA6NHM9 499 aa7.1□□□□□ -1.27
RNU6-1088P-201ENST00000516850 PDE4DQ08499 809 aa7.1□□□□□ -1.27
RNU6-1088P-201ENST00000516850 CYP4X1Q8N118 509 aa7.1□□□□□ -1.27
RNU6-1088P-201ENST00000516850 SPDYE5A6NIY4 337 aa7.09□□□□□ -1.27
RNU6-1088P-201ENST00000516850 TRIM32Q13049 653 aa7.09□□□□□ -1.27
RNU6-1088P-201ENST00000516850 MTMR2Q13614 643 aa7.09□□□□□ -1.27
RNU6-1088P-201ENST00000516850 TBC1D2Q9BYX2 928 aa7.09□□□□□ -1.27
RNU6-1088P-201ENST00000516850 PCDHGC3Q9UN70 934 aa7.09□□□□□ -1.27
RNU6-1088P-201ENST00000516850 TTC24A2A3L6 582 aaPredicted RBP7.08□□□□□ -1.28
RNU6-1088P-201ENST00000516850 MS4A1P11836 297 aa7.08□□□□□ -1.28
RNU6-1088P-201ENST00000516850 NUDT12Q9BQG2 462 aa7.08□□□□□ -1.28
RNU6-1088P-201ENST00000516850 PKD2L1Q9P0L9 805 aa7.08□□□□□ -1.28
RNU6-1088P-201ENST00000516850 GJA5P36382 358 aa7.07□□□□□ -1.28
RNU6-1088P-201ENST00000516850 PRR7Q8TB68 274 aa7.06□□□□□ -1.28
RNU6-1088P-201ENST00000516850 WNT7AO00755 349 aa7.05□□□□□ -1.28
RNU6-1088P-201ENST00000516850 CCNYL3P0C7X3 344 aa7.05□□□□□ -1.28
RNU6-1088P-201ENST00000516850 MYT1Q01538 1121 aa7.05□□□□□ -1.28
RNU6-1088P-201ENST00000516850 ZNF787Q6DD87 383 aa7.05□□□□□ -1.28
RNU6-1088P-201ENST00000516850 RSBN1LQ6PCB5 846 aaPredicted RBP7.05□□□□□ -1.28
RNU6-1088P-201ENST00000516850 RIC3Q7Z5B4 369 aa7.05□□□□□ -1.28
RNU6-1088P-201ENST00000516850 ZBTB3Q9H5J0 574 aa7.05□□□□□ -1.28
RNU6-1088P-201ENST00000516850 LCE2BO14633 110 aa7.04□□□□□ -1.28
RNU6-1088P-201ENST00000516850 SPTLC1O15269 473 aa7.04□□□□□ -1.28
RNU6-1088P-201ENST00000516850 WNT7BP56706 349 aa7.04□□□□□ -1.28
RNU6-1088P-201ENST00000516850 PTPRNQ16849 979 aa7.04□□□□□ -1.28
RNU6-1088P-201ENST00000516850 NUTM2BA6NNL0 878 aaPredicted RBP7.03□□□□□ -1.28
RNU6-1088P-201ENST00000516850 NUTM2EB1AL46 878 aaPredicted RBP7.03□□□□□ -1.28
RNU6-1088P-201ENST00000516850 CSPP1Q1MSJ5 1256 aa7.03□□□□□ -1.28
RNU6-1088P-201ENST00000516850 NUTM2DQ5VT03 806 aaPredicted RBP7.03□□□□□ -1.28
RNU6-1088P-201ENST00000516850 DESI1Q6ICB0 168 aa7.03□□□□□ -1.28
RNU6-1088P-201ENST00000516850 NUTM2AQ8IVF1 878 aaPredicted RBP7.03□□□□□ -1.28
RNU6-1088P-201ENST00000516850 SNIP1Q8TAD8 396 aaKnown RBP7.03□□□□□ -1.28
RNU6-1088P-201ENST00000516850 RSPH6AQ9H0K4 717 aa7.03□□□□□ -1.28
RNU6-1088P-201ENST00000516850 TOR4AQ9NXH8 423 aa7.03□□□□□ -1.28
RNU6-1088P-201ENST00000516850 RC3H1Q5TC82 1133 aaKnown RBP7.02□□□□□ -1.29
RNU6-1088P-201ENST00000516850 PRPF38BQ5VTL8 546 aaKnown RBP7.02□□□□□ -1.29
RNU6-1088P-201ENST00000516850 MRGPRX2Q96LB1 330 aa7.02□□□□□ -1.29
RNU6-1088P-201ENST00000516850 EVA1BQ9NVM1 165 aa7.02□□□□□ -1.29
RNU6-1088P-201ENST00000516850 PCDHB15Q9Y5E8 787 aa7.02□□□□□ -1.29
RNU6-1088P-201ENST00000516850 HRCP23327 699 aa7.01□□□□□ -1.29
RNU6-1088P-201ENST00000516850 CTHP32929 405 aa7.01□□□□□ -1.29
RNU6-1088P-201ENST00000516850 KCNH2Q12809 1159 aa7.01□□□□□ -1.29
RNU6-1088P-201ENST00000516850 ATP1B4Q9UN42 357 aaPredicted RBP7.01□□□□□ -1.29
RNU6-1088P-201ENST00000516850 MYSM1Q5VVJ2 828 aa7□□□□□ -1.29
RNU6-1088P-201ENST00000516850 PTCRAQ6ISU1 281 aaPredicted RBP7□□□□□ -1.29
RNU6-1088P-201ENST00000516850 EHBP1Q8NDI1 1231 aa7□□□□□ -1.29
RNU6-1088P-201ENST00000516850 TSC1Q92574 1164 aa7□□□□□ -1.29
RNU6-1088P-201ENST00000516850 AXIN1O15169 862 aa6.99□□□□□ -1.29
RNU6-1088P-201ENST00000516850 SKOR1P84550 965 aa6.99□□□□□ -1.29
RNU6-1088P-201ENST00000516850 CTC1Q2NKJ3 1217 aa6.99□□□□□ -1.29
RNU6-1088P-201ENST00000516850 UNC93B1Q9H1C4 597 aa6.99□□□□□ -1.29
RNU6-1088P-201ENST00000516850 AAASQ9NRG9 546 aa6.99□□□□□ -1.29
RNU6-1088P-201ENST00000516850 AVPP01185 164 aa6.98□□□□□ -1.29
RNU6-1088P-201ENST00000516850 CLK2P49760 499 aaKnown RBP6.98□□□□□ -1.29
RNU6-1088P-201ENST00000516850 TUSC1Q2TAM9 212 aa6.98□□□□□ -1.29
RNU6-1088P-201ENST00000516850 LYPD8Q6UX82 237 aa6.98□□□□□ -1.29
RNU6-1088P-201ENST00000516850 CABLES1Q8TDN4 633 aa6.98□□□□□ -1.29
RNU6-1088P-201ENST00000516850 CFAP99D6REC4 459 aa6.97□□□□□ -1.29
RNU6-1088P-201ENST00000516850 ST8SIA5O15466 376 aa6.97□□□□□ -1.29
RNU6-1088P-201ENST00000516850 ALDH1A1P00352 501 aa6.97□□□□□ -1.29
RNU6-1088P-201ENST00000516850 HELBQ8NG08 1087 aaPredicted RBP6.97□□□□□ -1.29
RNU6-1088P-201ENST00000516850 BAP1Q92560 729 aa6.97□□□□□ -1.29
RNU6-1088P-201ENST00000516850 LIMD1Q9UGP4 676 aa6.97□□□□□ -1.29
RNU6-1088P-201ENST00000516850 J3QL48 77 aa6.96□□□□□ -1.3
RNU6-1088P-201ENST00000516850 SMPD1P17405 629 aa6.96□□□□□ -1.3
RNU6-1088P-201ENST00000516850 SH3BP2P78314 561 aa6.96□□□□□ -1.3
RNU6-1088P-201ENST00000516850 LINC01559Q495D7 138 aa6.96□□□□□ -1.3
RNU6-1088P-201ENST00000516850 CRIPAKQ8N1N5 446 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms