RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 FBXO31Q5XUX0 539 aaPredicted RBP13.21□□□□□ -0.29
SNORA48.9-201ENST00000516419 SPNS2Q8IVW8 549 aa13.21□□□□□ -0.29
SNORA48.9-201ENST00000516419 CABLES1Q8TDN4 633 aa13.21□□□□□ -0.29
SNORA48.9-201ENST00000516419 SPDYE5A6NIY4 337 aa13.2□□□□□ -0.3
SNORA48.9-201ENST00000516419 NR1I2O75469 434 aa13.2□□□□□ -0.3
SNORA48.9-201ENST00000516419 MTMR2Q13614 643 aa13.2□□□□□ -0.3
SNORA48.9-201ENST00000516419 TMEM259Q4ZIN3 620 aa13.19□□□□□ -0.3
SNORA48.9-201ENST00000516419 RTL5Q5HYW3 569 aaPredicted RBP13.19□□□□□ -0.3
SNORA48.9-201ENST00000516419 C6orf229H3BNL8 230 aa13.18□□□□□ -0.3
SNORA48.9-201ENST00000516419 FLIIQ13045 1269 aa13.18□□□□□ -0.3
SNORA48.9-201ENST00000516419 BLOC1S3Q6QNY0 202 aa13.17□□□□□ -0.3
SNORA48.9-201ENST00000516419 SCUBE3Q8IX30 993 aa13.17□□□□□ -0.3
SNORA48.9-201ENST00000516419 SALL2Q9Y467 1007 aaPredicted RBP13.17□□□□□ -0.3
SNORA48.9-201ENST00000516419 BANK1Q8NDB2 785 aa13.16□□□□□ -0.3
SNORA48.9-201ENST00000516419 RNF166Q96A37 237 aaPredicted RBP13.16□□□□□ -0.3
SNORA48.9-201ENST00000516419 C14orf37Q86TY3 774 aa13.14□□□□□ -0.31
SNORA48.9-201ENST00000516419 SYMPKQ92797 1274 aaKnown RBP13.14□□□□□ -0.31
SNORA48.9-201ENST00000516419 FMNL1O95466 1100 aaPredicted RBP13.13□□□□□ -0.31
SNORA48.9-201ENST00000516419 BRICD5Q6PL45 260 aa13.13□□□□□ -0.31
SNORA48.9-201ENST00000516419 RETREG3Q86VR2 466 aa13.13□□□□□ -0.31
SNORA48.9-201ENST00000516419 COPS2P61201 443 aa13.12□□□□□ -0.31
SNORA48.9-201ENST00000516419 RNF19BQ6ZMZ0 732 aa13.12□□□□□ -0.31
SNORA48.9-201ENST00000516419 THAP11Q96EK4 314 aa13.12□□□□□ -0.31
SNORA48.9-201ENST00000516419 HCSTQ9UBK5 93 aa13.12□□□□□ -0.31
SNORA48.9-201ENST00000516419 TIMELESSQ9UNS1 1208 aa13.12□□□□□ -0.31
SNORA48.9-201ENST00000516419 AP1G2O75843 785 aa13.1□□□□□ -0.31
SNORA48.9-201ENST00000516419 PRR7Q8TB68 274 aa13.1□□□□□ -0.31
SNORA48.9-201ENST00000516419 MTRQ99707 1265 aa13.1□□□□□ -0.31
SNORA48.9-201ENST00000516419 USB1Q9BQ65 265 aaKnown RBP13.1□□□□□ -0.31
SNORA48.9-201ENST00000516419 CFAP99D6REC4 459 aa13.09□□□□□ -0.31
SNORA48.9-201ENST00000516419 HELBQ8NG08 1087 aaPredicted RBP13.09□□□□□ -0.31
SNORA48.9-201ENST00000516419 ZPR1O75312 459 aa13.08□□□□□ -0.32
SNORA48.9-201ENST00000516419 MCM6Q14566 821 aa13.08□□□□□ -0.32
SNORA48.9-201ENST00000516419 TJAP1Q5JTD0 557 aa13.08□□□□□ -0.32
SNORA48.9-201ENST00000516419 IL21Q9HBE4 155 aa13.08□□□□□ -0.32
SNORA48.9-201ENST00000516419 TSC1Q92574 1164 aa13.06□□□□□ -0.32
SNORA48.9-201ENST00000516419 DESI1Q6ICB0 168 aa13.05□□□□□ -0.32
SNORA48.9-201ENST00000516419 SPSB2Q99619 263 aa13.05□□□□□ -0.32
SNORA48.9-201ENST00000516419 USP17L8P0C7I0 530 aa13.04□□□□□ -0.32
SNORA48.9-201ENST00000516419 SNRKQ9NRH2 765 aa13.04□□□□□ -0.32
SNORA48.9-201ENST00000516419 SOCS7O14512 581 aa13.03□□□□□ -0.32
SNORA48.9-201ENST00000516419 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
SNORA48.9-201ENST00000516419 MSS51Q4VC12 460 aa13.03□□□□□ -0.32
SNORA48.9-201ENST00000516419 MMRN1Q13201 1228 aa13.02□□□□□ -0.33
SNORA48.9-201ENST00000516419 ZNF516Q92618 1163 aa13.02□□□□□ -0.33
SNORA48.9-201ENST00000516419 ADH1BP00325 375 aa13.01□□□□□ -0.33
SNORA48.9-201ENST00000516419 APBB1O00213 710 aa13□□□□□ -0.33
SNORA48.9-201ENST00000516419 TLL1O43897 1013 aa13□□□□□ -0.33
SNORA48.9-201ENST00000516419 UBTFP17480 764 aaKnown RBP13□□□□□ -0.33
SNORA48.9-201ENST00000516419 FAM160A2Q8N612 972 aaPredicted RBP13□□□□□ -0.33
SNORA48.9-201ENST00000516419 JUNDP17535 347 aa12.99□□□□□ -0.33
SNORA48.9-201ENST00000516419 MTMR14Q8NCE2 650 aa12.99□□□□□ -0.33
SNORA48.9-201ENST00000516419 ZMYND15Q9H091 742 aa12.98□□□□□ -0.33
SNORA48.9-201ENST00000516419 LYPD8Q6UX82 237 aa12.97□□□□□ -0.33
SNORA48.9-201ENST00000516419 ITGBL1O95965 494 aaPredicted RBP12.96□□□□□ -0.33
SNORA48.9-201ENST00000516419 LRRN4Q8WUT4 740 aa12.96□□□□□ -0.33
SNORA48.9-201ENST00000516419 PER1O15534 1290 aaPredicted RBP12.95□□□□□ -0.34
SNORA48.9-201ENST00000516419 DXOO77932 396 aaKnown RBP12.95□□□□□ -0.34
SNORA48.9-201ENST00000516419 MMP16P51512 607 aa12.95□□□□□ -0.34
SNORA48.9-201ENST00000516419 KCNC4Q03721 635 aa12.95□□□□□ -0.34
SNORA48.9-201ENST00000516419 PRM3Q9NNZ6 103 aa12.95□□□□□ -0.34
SNORA48.9-201ENST00000516419 SLC6A16Q9GZN6 736 aa12.94□□□□□ -0.34
SNORA48.9-201ENST00000516419 RAD21O60216 631 aa12.93□□□□□ -0.34
SNORA48.9-201ENST00000516419 PTPRNQ16849 979 aa12.93□□□□□ -0.34
SNORA48.9-201ENST00000516419 NKX2-3Q8TAU0 364 aa12.93□□□□□ -0.34
SNORA48.9-201ENST00000516419 HMX1Q9NP08 348 aaPredicted RBP12.93□□□□□ -0.34
SNORA48.9-201ENST00000516419 PRDM9Q9NQV7 894 aa12.93□□□□□ -0.34
SNORA48.9-201ENST00000516419 GJD4Q96KN9 370 aaPredicted RBP12.92□□□□□ -0.34
SNORA48.9-201ENST00000516419 A6NJR5 290 aa12.91□□□□□ -0.34
SNORA48.9-201ENST00000516419 CLUAP1Q96AJ1 413 aa12.91□□□□□ -0.34
SNORA48.9-201ENST00000516419 COG6Q9Y2V7 657 aa12.9□□□□□ -0.34
SNORA48.9-201ENST00000516419 POM121Q96HA1 1249 aa12.89□□□□□ -0.35
SNORA48.9-201ENST00000516419 TRIM34Q9BYJ4 488 aa12.89□□□□□ -0.35
SNORA48.9-201ENST00000516419 NDUFB9Q9Y6M9 179 aa12.89□□□□□ -0.35
SNORA48.9-201ENST00000516419 CCNYL3P0C7X3 344 aa12.88□□□□□ -0.35
SNORA48.9-201ENST00000516419 NUDT12Q9BQG2 462 aa12.88□□□□□ -0.35
SNORA48.9-201ENST00000516419 S1PR4O95977 384 aa12.87□□□□□ -0.35
SNORA48.9-201ENST00000516419 NR6A1Q15406 480 aa12.87□□□□□ -0.35
SNORA48.9-201ENST00000516419 F12P00748 615 aaPredicted RBP12.86□□□□□ -0.35
SNORA48.9-201ENST00000516419 GDPD2Q9HCC8 539 aa12.86□□□□□ -0.35
SNORA48.9-201ENST00000516419 EVA1BQ9NVM1 165 aa12.86□□□□□ -0.35
SNORA48.9-201ENST00000516419 TBC1D2BQ9UPU7 963 aa12.86□□□□□ -0.35
SNORA48.9-201ENST00000516419 CTHP32929 405 aa12.84□□□□□ -0.35
SNORA48.9-201ENST00000516419 PNMA1Q8ND90 353 aa12.84□□□□□ -0.35
SNORA48.9-201ENST00000516419 EPS8L1Q8TE68 723 aa12.84□□□□□ -0.35
SNORA48.9-201ENST00000516419 KCNH2Q12809 1159 aa12.83□□□□□ -0.36
SNORA48.9-201ENST00000516419 PROSER2Q86WR7 435 aaPredicted RBP12.83□□□□□ -0.36
SNORA48.9-201ENST00000516419 MAP10Q9P2G4 905 aa12.82□□□□□ -0.36
SNORA48.9-201ENST00000516419 GGCXP38435 758 aa12.81□□□□□ -0.36
SNORA48.9-201ENST00000516419 ABL2P42684 1182 aa12.81□□□□□ -0.36
SNORA48.9-201ENST00000516419 WWC1Q8IX03 1113 aa12.81□□□□□ -0.36
SNORA48.9-201ENST00000516419 CCDC24Q8N4L8 307 aa12.81□□□□□ -0.36
SNORA48.9-201ENST00000516419 IFFO2Q5TF58 517 aa12.8□□□□□ -0.36
SNORA48.9-201ENST00000516419 FNBP4Q8N3X1 1017 aaPredicted RBP12.8□□□□□ -0.36
SNORA48.9-201ENST00000516419 TRAK2O60296 914 aa12.79□□□□□ -0.36
SNORA48.9-201ENST00000516419 FCF1Q9Y324 198 aaKnown RBP12.79□□□□□ -0.36
SNORA48.9-201ENST00000516419 ARMC2Q8NEN0 867 aa12.78□□□□□ -0.36
SNORA48.9-201ENST00000516419 FKBPLQ9UIM3 349 aa12.78□□□□□ -0.36
SNORA48.9-201ENST00000516419 GPR37L1O60883 481 aa12.77□□□□□ -0.37
SNORA48.9-201ENST00000516419 ZC3H4Q9UPT8 1303 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms