RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 USB1Q9BQ65 265 aaKnown RBP7.63□□□□□ -1.19
SNORA40.12-201ENST00000516329 MSS51Q4VC12 460 aa7.62□□□□□ -1.19
SNORA40.12-201ENST00000516329 ANKLE1Q8NAG6 615 aa7.62□□□□□ -1.19
SNORA40.12-201ENST00000516329 FCF1Q9Y324 198 aaKnown RBP7.62□□□□□ -1.19
SNORA40.12-201ENST00000516329 NEUROD2Q15784 382 aa7.61□□□□□ -1.19
SNORA40.12-201ENST00000516329 CSPP1Q1MSJ5 1256 aa7.61□□□□□ -1.19
SNORA40.12-201ENST00000516329 PLA2G2CQ5R387 149 aa7.61□□□□□ -1.19
SNORA40.12-201ENST00000516329 RSBN1LQ6PCB5 846 aaPredicted RBP7.61□□□□□ -1.19
SNORA40.12-201ENST00000516329 PRKCSHP14314 528 aaPredicted RBP7.6□□□□□ -1.19
SNORA40.12-201ENST00000516329 DIXDC1Q155Q3 683 aa7.6□□□□□ -1.19
SNORA40.12-201ENST00000516329 MYSM1Q5VVJ2 828 aa7.6□□□□□ -1.19
SNORA40.12-201ENST00000516329 EMID1Q96A84 441 aaPredicted RBP7.6□□□□□ -1.19
SNORA40.12-201ENST00000516329 RIC3Q7Z5B4 369 aa7.59□□□□□ -1.19
SNORA40.12-201ENST00000516329 RETREG3Q86VR2 466 aa7.59□□□□□ -1.19
SNORA40.12-201ENST00000516329 FAM117AQ9C073 453 aa7.59□□□□□ -1.19
SNORA40.12-201ENST00000516329 PCDHB15Q9Y5E8 787 aa7.59□□□□□ -1.19
SNORA40.12-201ENST00000516329 SPTLC1O15269 473 aa7.58□□□□□ -1.2
SNORA40.12-201ENST00000516329 SLC19A1P41440 591 aa7.58□□□□□ -1.2
SNORA40.12-201ENST00000516329 MTMR2Q13614 643 aa7.58□□□□□ -1.2
SNORA40.12-201ENST00000516329 LIAT1Q6ZQX7 453 aa7.58□□□□□ -1.2
SNORA40.12-201ENST00000516329 LIMD1Q9UGP4 676 aa7.58□□□□□ -1.2
SNORA40.12-201ENST00000516329 DXOO77932 396 aaKnown RBP7.57□□□□□ -1.2
SNORA40.12-201ENST00000516329 MMP16P51512 607 aa7.57□□□□□ -1.2
SNORA40.12-201ENST00000516329 CABLES1Q8TDN4 633 aa7.57□□□□□ -1.2
SNORA40.12-201ENST00000516329 POLR3EQ9NVU0 708 aa7.57□□□□□ -1.2
SNORA40.12-201ENST00000516329 V9GY48 417 aaPredicted RBP7.57□□□□□ -1.2
SNORA40.12-201ENST00000516329 JUNDP17535 347 aa7.56□□□□□ -1.2
SNORA40.12-201ENST00000516329 CLK2P49760 499 aaKnown RBP7.56□□□□□ -1.2
SNORA40.12-201ENST00000516329 BRPF1P55201 1214 aaPredicted RBP7.56□□□□□ -1.2
SNORA40.12-201ENST00000516329 CCDC24Q8N4L8 307 aa7.56□□□□□ -1.2
SNORA40.12-201ENST00000516329 IRX2Q9BZI1 471 aaPredicted RBP7.56□□□□□ -1.2
SNORA40.12-201ENST00000516329 PLEKHG3A1L390 1219 aa7.55□□□□□ -1.2
SNORA40.12-201ENST00000516329 GJA5P36382 358 aa7.55□□□□□ -1.2
SNORA40.12-201ENST00000516329 PRR7Q8TB68 274 aa7.55□□□□□ -1.2
SNORA40.12-201ENST00000516329 DDRGK1Q96HY6 314 aa7.55□□□□□ -1.2
SNORA40.12-201ENST00000516329 ZBTB3Q9H5J0 574 aa7.55□□□□□ -1.2
SNORA40.12-201ENST00000516329 HRCP23327 699 aa7.54□□□□□ -1.2
SNORA40.12-201ENST00000516329 QPCTQ16769 361 aa7.54□□□□□ -1.2
SNORA40.12-201ENST00000516329 SPRYD7Q5W111 196 aa7.54□□□□□ -1.2
SNORA40.12-201ENST00000516329 RSPH6AQ9H0K4 717 aa7.54□□□□□ -1.2
SNORA40.12-201ENST00000516329 ATP1B4Q9UN42 357 aaPredicted RBP7.54□□□□□ -1.2
SNORA40.12-201ENST00000516329 NUTM2BA6NNL0 878 aaPredicted RBP7.53□□□□□ -1.2
SNORA40.12-201ENST00000516329 NUTM2EB1AL46 878 aaPredicted RBP7.53□□□□□ -1.2
SNORA40.12-201ENST00000516329 CFAP99D6REC4 459 aa7.53□□□□□ -1.2
SNORA40.12-201ENST00000516329 ZNF697Q5TEC3 545 aa7.53□□□□□ -1.2
SNORA40.12-201ENST00000516329 NUTM2DQ5VT03 806 aaPredicted RBP7.53□□□□□ -1.2
SNORA40.12-201ENST00000516329 NUTM2AQ8IVF1 878 aaPredicted RBP7.53□□□□□ -1.2
SNORA40.12-201ENST00000516329 SPDYE5A6NIY4 337 aa7.52□□□□□ -1.21
SNORA40.12-201ENST00000516329 SH3D19Q5HYK7 790 aa7.52□□□□□ -1.21
SNORA40.12-201ENST00000516329 IL27Q8NEV9 243 aa7.52□□□□□ -1.21
SNORA40.12-201ENST00000516329 TSC1Q92574 1164 aa7.52□□□□□ -1.21
SNORA40.12-201ENST00000516329 NUDT12Q9BQG2 462 aa7.52□□□□□ -1.21
SNORA40.12-201ENST00000516329 ZBTB24O43167 697 aaPredicted RBP7.51□□□□□ -1.21
SNORA40.12-201ENST00000516329 PRPF38BQ5VTL8 546 aaKnown RBP7.51□□□□□ -1.21
SNORA40.12-201ENST00000516329 ZNF598Q86UK7 904 aaKnown RBP7.51□□□□□ -1.21
SNORA40.12-201ENST00000516329 RPIAP49247 311 aa7.5□□□□□ -1.21
SNORA40.12-201ENST00000516329 PDZRN3Q9UPQ7 1066 aa7.5□□□□□ -1.21
SNORA40.12-201ENST00000516329 TNFRSF10AO00220 468 aa7.49□□□□□ -1.21
SNORA40.12-201ENST00000516329 GFRA3O60609 400 aa7.49□□□□□ -1.21
SNORA40.12-201ENST00000516329 LILRB3O75022 631 aa7.49□□□□□ -1.21
SNORA40.12-201ENST00000516329 CCNYL3P0C7X3 344 aa7.49□□□□□ -1.21
SNORA40.12-201ENST00000516329 TRIM32Q13049 653 aa7.49□□□□□ -1.21
SNORA40.12-201ENST00000516329 SKIV2LQ15477 1246 aaKnown RBP7.49□□□□□ -1.21
SNORA40.12-201ENST00000516329 TUSC1Q2TAM9 212 aa7.49□□□□□ -1.21
SNORA40.12-201ENST00000516329 RTL5Q5HYW3 569 aaPredicted RBP7.49□□□□□ -1.21
SNORA40.12-201ENST00000516329 PROCA1Q8NCQ7 364 aaPredicted RBP7.49□□□□□ -1.21
SNORA40.12-201ENST00000516329 FOXC1Q12948 553 aa7.48□□□□□ -1.21
SNORA40.12-201ENST00000516329 PTPRNQ16849 979 aa7.48□□□□□ -1.21
SNORA40.12-201ENST00000516329 TRIM67Q6ZTA4 783 aa7.48□□□□□ -1.21
SNORA40.12-201ENST00000516329 CD2BP2O95400 341 aaKnown RBP7.47□□□□□ -1.21
SNORA40.12-201ENST00000516329 FBXO31Q5XUX0 539 aaPredicted RBP7.47□□□□□ -1.21
SNORA40.12-201ENST00000516329 DESI1Q6ICB0 168 aa7.47□□□□□ -1.21
SNORA40.12-201ENST00000516329 PTCRAQ6ISU1 281 aaPredicted RBP7.47□□□□□ -1.21
SNORA40.12-201ENST00000516329 CTHP32929 405 aa7.46□□□□□ -1.22
SNORA40.12-201ENST00000516329 NRG2O14511 850 aaPredicted RBP7.45□□□□□ -1.22
SNORA40.12-201ENST00000516329 PER1O15534 1290 aaPredicted RBP7.45□□□□□ -1.22
SNORA40.12-201ENST00000516329 LYPD8Q6UX82 237 aa7.45□□□□□ -1.22
SNORA40.12-201ENST00000516329 Q6ZNB5 142 aa7.45□□□□□ -1.22
SNORA40.12-201ENST00000516329 HELBQ8NG08 1087 aaPredicted RBP7.45□□□□□ -1.22
SNORA40.12-201ENST00000516329 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.45□□□□□ -1.22
SNORA40.12-201ENST00000516329 PKD2L1Q9P0L9 805 aa7.45□□□□□ -1.22
SNORA40.12-201ENST00000516329 MAP10Q9P2G4 905 aa7.45□□□□□ -1.22
SNORA40.12-201ENST00000516329 GDF9O60383 454 aa7.44□□□□□ -1.22
SNORA40.12-201ENST00000516329 KCNH2Q12809 1159 aa7.44□□□□□ -1.22
SNORA40.12-201ENST00000516329 LAPTM4AQ15012 233 aa7.44□□□□□ -1.22
SNORA40.12-201ENST00000516329 LINC01559Q495D7 138 aa7.44□□□□□ -1.22
SNORA40.12-201ENST00000516329 UNC93B1Q9H1C4 597 aa7.44□□□□□ -1.22
SNORA40.12-201ENST00000516329 EVA1BQ9NVM1 165 aa7.44□□□□□ -1.22
SNORA40.12-201ENST00000516329 PCMTD1Q96MG8 357 aaPredicted RBP7.43□□□□□ -1.22
SNORA40.12-201ENST00000516329 SKOR1P84550 965 aa7.42□□□□□ -1.22
SNORA40.12-201ENST00000516329 PRR20EP86478 221 aa7.42□□□□□ -1.22
SNORA40.12-201ENST00000516329 PRR20CP86479 221 aa7.42□□□□□ -1.22
SNORA40.12-201ENST00000516329 PRR20DP86480 221 aa7.42□□□□□ -1.22
SNORA40.12-201ENST00000516329 PRR20BP86481 221 aa7.42□□□□□ -1.22
SNORA40.12-201ENST00000516329 PRR20AP86496 221 aa7.42□□□□□ -1.22
SNORA40.12-201ENST00000516329 AP1G2O75843 785 aa7.41□□□□□ -1.22
SNORA40.12-201ENST00000516329 F12P00748 615 aaPredicted RBP7.41□□□□□ -1.22
SNORA40.12-201ENST00000516329 CTDSPL2Q05D32 466 aa7.41□□□□□ -1.22
SNORA40.12-201ENST00000516329 BAP1Q92560 729 aa7.41□□□□□ -1.22
SNORA40.12-201ENST00000516329 FAM187AA6NFU0 413 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms