RNA–Protein interactions for RNA: ENST00000515835.2

PDE4D-225, Transcript of phosphodiesterase 4D, humanhuman

TSL 4 BASIC

Gene PDE4D, Length 590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-225ENST00000515835 SALL2Q9Y467 1007 aaPredicted RBP12.21□□□□□ -0.45
PDE4D-225ENST00000515835 PRPF38BQ5VTL8 546 aaKnown RBP12.2□□□□□ -0.46
PDE4D-225ENST00000515835 IL21Q9HBE4 155 aa12.2□□□□□ -0.46
PDE4D-225ENST00000515835 ATP1B4Q9UN42 357 aaPredicted RBP12.19□□□□□ -0.46
PDE4D-225ENST00000515835 PCDHB15Q9Y5E8 787 aa12.19□□□□□ -0.46
PDE4D-225ENST00000515835 ZPR1O75312 459 aa12.18□□□□□ -0.46
PDE4D-225ENST00000515835 ZBTB3Q9H5J0 574 aa12.17□□□□□ -0.46
PDE4D-225ENST00000515835 SPDYE5A6NIY4 337 aa12.16□□□□□ -0.46
PDE4D-225ENST00000515835 LILRB3O75022 631 aa12.16□□□□□ -0.46
PDE4D-225ENST00000515835 FMNL1O95466 1100 aaPredicted RBP12.16□□□□□ -0.46
PDE4D-225ENST00000515835 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
PDE4D-225ENST00000515835 MTMR2Q13614 643 aa12.16□□□□□ -0.46
PDE4D-225ENST00000515835 CSPP1Q1MSJ5 1256 aa12.16□□□□□ -0.46
PDE4D-225ENST00000515835 BRICD5Q6PL45 260 aa12.16□□□□□ -0.46
PDE4D-225ENST00000515835 THAP11Q96EK4 314 aa12.16□□□□□ -0.46
PDE4D-225ENST00000515835 C6orf229H3BNL8 230 aa12.15□□□□□ -0.46
PDE4D-225ENST00000515835 PPP2R2DQ66LE6 453 aa12.15□□□□□ -0.46
PDE4D-225ENST00000515835 DCAF1Q9Y4B6 1507 aa12.15□□□□□ -0.46
PDE4D-225ENST00000515835 HRCP23327 699 aa12.14□□□□□ -0.47
PDE4D-225ENST00000515835 QPCTQ16769 361 aa12.14□□□□□ -0.47
PDE4D-225ENST00000515835 RNF19BQ6ZMZ0 732 aa12.14□□□□□ -0.47
PDE4D-225ENST00000515835 ZCCHC6Q5VYS8 1495 aaKnown RBP12.14□□□□□ -0.47
PDE4D-225ENST00000515835 NUTM2BA6NNL0 878 aaPredicted RBP12.13□□□□□ -0.47
PDE4D-225ENST00000515835 NUTM2EB1AL46 878 aaPredicted RBP12.13□□□□□ -0.47
PDE4D-225ENST00000515835 KCNC4Q03721 635 aa12.13□□□□□ -0.47
PDE4D-225ENST00000515835 NUTM2DQ5VT03 806 aaPredicted RBP12.13□□□□□ -0.47
PDE4D-225ENST00000515835 NUTM2AQ8IVF1 878 aaPredicted RBP12.13□□□□□ -0.47
PDE4D-225ENST00000515835 CABLES1Q8TDN4 633 aa12.13□□□□□ -0.47
PDE4D-225ENST00000515835 ZNF516Q92618 1163 aa12.13□□□□□ -0.47
PDE4D-225ENST00000515835 RETREG3Q86VR2 466 aa12.12□□□□□ -0.47
PDE4D-225ENST00000515835 SYMPKQ92797 1274 aaKnown RBP12.11□□□□□ -0.47
PDE4D-225ENST00000515835 SPSB2Q99619 263 aa12.11□□□□□ -0.47
PDE4D-225ENST00000515835 USB1Q9BQ65 265 aaKnown RBP12.11□□□□□ -0.47
PDE4D-225ENST00000515835 ADH1BP00325 375 aa12.1□□□□□ -0.47
PDE4D-225ENST00000515835 TLL1O43897 1013 aa12.09□□□□□ -0.47
PDE4D-225ENST00000515835 RTL5Q5HYW3 569 aaPredicted RBP12.09□□□□□ -0.47
PDE4D-225ENST00000515835 MSS51Q4VC12 460 aa12.08□□□□□ -0.48
PDE4D-225ENST00000515835 FBXO31Q5XUX0 539 aaPredicted RBP12.08□□□□□ -0.48
PDE4D-225ENST00000515835 RFC5P40937 340 aa12.07□□□□□ -0.48
PDE4D-225ENST00000515835 PRR7Q8TB68 274 aa12.07□□□□□ -0.48
PDE4D-225ENST00000515835 IFFO2Q5TF58 517 aa12.06□□□□□ -0.48
PDE4D-225ENST00000515835 FAM160A2Q8N612 972 aaPredicted RBP12.06□□□□□ -0.48
PDE4D-225ENST00000515835 PLSCR2Q9NRY7 297 aa12.06□□□□□ -0.48
PDE4D-225ENST00000515835 TMEM259Q4ZIN3 620 aa12.05□□□□□ -0.48
PDE4D-225ENST00000515835 DESI1Q6ICB0 168 aa12.05□□□□□ -0.48
PDE4D-225ENST00000515835 NKX2-3Q8TAU0 364 aa12.05□□□□□ -0.48
PDE4D-225ENST00000515835 CFAP99D6REC4 459 aa12.04□□□□□ -0.48
PDE4D-225ENST00000515835 HELBQ8NG08 1087 aaPredicted RBP12.03□□□□□ -0.48
PDE4D-225ENST00000515835 BICRAQ9NZM4 1560 aa12.03□□□□□ -0.48
PDE4D-225ENST00000515835 SLC6A16Q9GZN6 736 aa12.02□□□□□ -0.49
PDE4D-225ENST00000515835 JUNDP17535 347 aa12.01□□□□□ -0.49
PDE4D-225ENST00000515835 MMP16P51512 607 aa12.01□□□□□ -0.49
PDE4D-225ENST00000515835 BANK1Q8NDB2 785 aa12.01□□□□□ -0.49
PDE4D-225ENST00000515835 SHROOM4Q9ULL8 1493 aa12.01□□□□□ -0.49
PDE4D-225ENST00000515835 UNC13AQ9UPW8 1703 aa12□□□□□ -0.49
PDE4D-225ENST00000515835 DXOO77932 396 aaKnown RBP12□□□□□ -0.49
PDE4D-225ENST00000515835 PLA2G2EQ9NZK7 142 aa12□□□□□ -0.49
PDE4D-225ENST00000515835 GTF3C3Q9Y5Q9 886 aa12□□□□□ -0.49
PDE4D-225ENST00000515835 AP1G2O75843 785 aa11.99□□□□□ -0.49
PDE4D-225ENST00000515835 S1PR4O95977 384 aa11.98□□□□□ -0.49
PDE4D-225ENST00000515835 TSC1Q92574 1164 aa11.98□□□□□ -0.49
PDE4D-225ENST00000515835 PRDM9Q9NQV7 894 aa11.98□□□□□ -0.49
PDE4D-225ENST00000515835 GGCXP38435 758 aa11.97□□□□□ -0.49
PDE4D-225ENST00000515835 LYPD8Q6UX82 237 aa11.96□□□□□ -0.49
PDE4D-225ENST00000515835 CTDSPL2Q05D32 466 aa11.95□□□□□ -0.5
PDE4D-225ENST00000515835 PTPRNQ16849 979 aa11.95□□□□□ -0.5
PDE4D-225ENST00000515835 USP17L8P0C7I0 530 aa11.94□□□□□ -0.5
PDE4D-225ENST00000515835 SOCS7O14512 581 aa11.92□□□□□ -0.5
PDE4D-225ENST00000515835 PER1O15534 1290 aaPredicted RBP11.92□□□□□ -0.5
PDE4D-225ENST00000515835 FLIIQ13045 1269 aa11.92□□□□□ -0.5
PDE4D-225ENST00000515835 PPP1R18Q6NYC8 613 aa11.92□□□□□ -0.5
PDE4D-225ENST00000515835 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.92□□□□□ -0.5
PDE4D-225ENST00000515835 NUDT12Q9BQG2 462 aa11.91□□□□□ -0.5
PDE4D-225ENST00000515835 RNF223E7ERA6 249 aa11.9□□□□□ -0.5
PDE4D-225ENST00000515835 CCNYL3P0C7X3 344 aa11.9□□□□□ -0.5
PDE4D-225ENST00000515835 ANKLE1Q8NAG6 615 aa11.9□□□□□ -0.5
PDE4D-225ENST00000515835 LRRN4Q8WUT4 740 aa11.89□□□□□ -0.51
PDE4D-225ENST00000515835 A0A0G2JS52 829 aa11.88□□□□□ -0.51
PDE4D-225ENST00000515835 MCM6Q14566 821 aa11.88□□□□□ -0.51
PDE4D-225ENST00000515835 SNRKQ9NRH2 765 aa11.88□□□□□ -0.51
PDE4D-225ENST00000515835 EVA1BQ9NVM1 165 aa11.88□□□□□ -0.51
PDE4D-225ENST00000515835 FCF1Q9Y324 198 aaKnown RBP11.88□□□□□ -0.51
PDE4D-225ENST00000515835 APBB1O00213 710 aa11.87□□□□□ -0.51
PDE4D-225ENST00000515835 PPEF1O14829 653 aaPredicted RBP11.86□□□□□ -0.51
PDE4D-225ENST00000515835 F12P00748 615 aaPredicted RBP11.86□□□□□ -0.51
PDE4D-225ENST00000515835 MTMR14Q8NCE2 650 aa11.86□□□□□ -0.51
PDE4D-225ENST00000515835 KCNH2Q12809 1159 aa11.85□□□□□ -0.51
PDE4D-225ENST00000515835 CCDC24Q8N4L8 307 aa11.85□□□□□ -0.51
PDE4D-225ENST00000515835 SCRIBQ14160 1630 aa11.85□□□□□ -0.51
PDE4D-225ENST00000515835 HMX1Q9NP08 348 aaPredicted RBP11.84□□□□□ -0.51
PDE4D-225ENST00000515835 CTHP32929 405 aa11.83□□□□□ -0.52
PDE4D-225ENST00000515835 MAP10Q9P2G4 905 aa11.82□□□□□ -0.52
PDE4D-225ENST00000515835 GJD4Q96KN9 370 aaPredicted RBP11.81□□□□□ -0.52
PDE4D-225ENST00000515835 TRIM34Q9BYJ4 488 aa11.81□□□□□ -0.52
PDE4D-225ENST00000515835 NR6A1Q15406 480 aa11.8□□□□□ -0.52
PDE4D-225ENST00000515835 PRM3Q9NNZ6 103 aa11.8□□□□□ -0.52
PDE4D-225ENST00000515835 PLA2G2CQ5R387 149 aa11.79□□□□□ -0.52
PDE4D-225ENST00000515835 PTCRAQ6ISU1 281 aaPredicted RBP11.79□□□□□ -0.52
PDE4D-225ENST00000515835 PNMA1Q8ND90 353 aa11.79□□□□□ -0.52
PDE4D-225ENST00000515835 ZBTB24O43167 697 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms