RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 SETQ01105 290 aaPredicted RBP13.36□□□□□ -0.27
TRIM41-209ENST00000515834 RRP12Q5JTH9 1297 aaKnown RBP13.36□□□□□ -0.27
TRIM41-209ENST00000515834 DDX11L8A8MPP1 907 aa13.35□□□□□ -0.27
TRIM41-209ENST00000515834 PDE3BQ13370 1112 aa13.35□□□□□ -0.27
TRIM41-209ENST00000515834 CABP2Q9NPB3 220 aa13.35□□□□□ -0.27
TRIM41-209ENST00000515834 REC8O95072 547 aa13.35□□□□□ -0.27
TRIM41-209ENST00000515834 HOMER1Q86YM7 354 aa13.35□□□□□ -0.27
TRIM41-209ENST00000515834 GPRASP1Q5JY77 1395 aa13.34□□□□□ -0.27
TRIM41-209ENST00000515834 DNAJC2Q99543 621 aaKnown RBP13.34□□□□□ -0.27
TRIM41-209ENST00000515834 CRBNQ96SW2 442 aa13.34□□□□□ -0.27
TRIM41-209ENST00000515834 ERC2O15083 957 aa13.34□□□□□ -0.27
TRIM41-209ENST00000515834 OFD1O75665 1012 aa13.34□□□□□ -0.27
TRIM41-209ENST00000515834 FAM161AQ3B820 660 aa13.34□□□□□ -0.27
TRIM41-209ENST00000515834 API5Q9BZZ5 524 aaKnown RBP13.34□□□□□ -0.27
TRIM41-209ENST00000515834 GGNBP2Q9H3C7 697 aa13.33□□□□□ -0.27
TRIM41-209ENST00000515834 TBC1D2BQ9UPU7 963 aa13.33□□□□□ -0.27
TRIM41-209ENST00000515834 CNNM1Q9NRU3 951 aa13.33□□□□□ -0.28
TRIM41-209ENST00000515834 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
TRIM41-209ENST00000515834 ATP2B1P20020 1258 aa13.33□□□□□ -0.28
TRIM41-209ENST00000515834 SMC3Q9UQE7 1217 aa13.33□□□□□ -0.28
TRIM41-209ENST00000515834 TOM1L2Q6ZVM7 507 aa13.32□□□□□ -0.28
TRIM41-209ENST00000515834 XBP1P17861 261 aa13.32□□□□□ -0.28
TRIM41-209ENST00000515834 ROCK1Q13464 1354 aa13.32□□□□□ -0.28
TRIM41-209ENST00000515834 UBTFL1P0CB47 393 aaPredicted RBP13.32□□□□□ -0.28
TRIM41-209ENST00000515834 DDX19BQ9UMR2 479 aa13.32□□□□□ -0.28
TRIM41-209ENST00000515834 CDK5RAP3Q96JB5 506 aa13.31□□□□□ -0.28
TRIM41-209ENST00000515834 GPS2Q13227 327 aa13.31□□□□□ -0.28
TRIM41-209ENST00000515834 TMEM132EQ6IEE7 984 aa13.31□□□□□ -0.28
TRIM41-209ENST00000515834 TXNDC2Q86VQ3 553 aa13.31□□□□□ -0.28
TRIM41-209ENST00000515834 PAXIP1Q6ZW49 1069 aaPredicted RBP13.31□□□□□ -0.28
TRIM41-209ENST00000515834 CENPQQ7L2Z9 268 aaPredicted RBP13.31□□□□□ -0.28
TRIM41-209ENST00000515834 RAPGEF2Q9Y4G8 1499 aa13.31□□□□□ -0.28
TRIM41-209ENST00000515834 HSP90AB4PQ58FF6 505 aa13.31□□□□□ -0.28
TRIM41-209ENST00000515834 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
TRIM41-209ENST00000515834 DZIP1LQ8IYY4 767 aaKnown RBP13.3□□□□□ -0.28
TRIM41-209ENST00000515834 IPO9Q96P70 1041 aaKnown RBP13.3□□□□□ -0.28
TRIM41-209ENST00000515834 PRDM2Q13029 1718 aa13.3□□□□□ -0.28
TRIM41-209ENST00000515834 KRT18P05783 430 aaKnown RBP13.3□□□□□ -0.28
TRIM41-209ENST00000515834 SLC3A2P08195 630 aaKnown RBP13.3□□□□□ -0.28
TRIM41-209ENST00000515834 SASS6Q6UVJ0 657 aa13.3□□□□□ -0.28
TRIM41-209ENST00000515834 FSD1Q9BTV5 496 aa13.3□□□□□ -0.28
TRIM41-209ENST00000515834 TTC39AQ5SRH9 613 aa13.29□□□□□ -0.28
TRIM41-209ENST00000515834 TTLL5Q6EMB2 1281 aa13.29□□□□□ -0.28
TRIM41-209ENST00000515834 SART3Q15020 963 aaKnown RBP13.29□□□□□ -0.28
TRIM41-209ENST00000515834 PDILTQ8N807 584 aa13.29□□□□□ -0.28
TRIM41-209ENST00000515834 BICDL1Q6ZP65 573 aa13.29□□□□□ -0.28
TRIM41-209ENST00000515834 ZSCAN29Q8IWY8 852 aaPredicted RBP13.29□□□□□ -0.28
TRIM41-209ENST00000515834 CABP4P57796 275 aa13.28□□□□□ -0.28
TRIM41-209ENST00000515834 SKIDA1Q1XH10 827 aa13.28□□□□□ -0.28
TRIM41-209ENST00000515834 VSIG10Q8N0Z9 540 aa13.28□□□□□ -0.28
TRIM41-209ENST00000515834 EXOC6Q8TAG9 804 aa13.28□□□□□ -0.28
TRIM41-209ENST00000515834 GNAI1P63096 354 aa13.28□□□□□ -0.28
TRIM41-209ENST00000515834 CCDC73Q6ZRK6 1079 aa13.28□□□□□ -0.28
TRIM41-209ENST00000515834 RUFY1Q96T51 708 aa13.28□□□□□ -0.28
TRIM41-209ENST00000515834 MPHOSPH10O00566 681 aaKnown RBP13.28□□□□□ -0.28
TRIM41-209ENST00000515834 TATP17735 454 aaPredicted RBP13.28□□□□□ -0.28
TRIM41-209ENST00000515834 CHMP4BP1P59074 171 aa13.27□□□□□ -0.28
TRIM41-209ENST00000515834 PLEKHO1Q53GL0 409 aaPredicted RBP13.27□□□□□ -0.28
TRIM41-209ENST00000515834 LNPKQ9C0E8 428 aa13.27□□□□□ -0.28
TRIM41-209ENST00000515834 OLFM4Q6UX06 510 aa13.27□□□□□ -0.29
TRIM41-209ENST00000515834 INTS3Q68E01 1043 aaKnown RBP13.27□□□□□ -0.29
TRIM41-209ENST00000515834 GNL3LQ9NVN8 582 aaKnown RBP13.27□□□□□ -0.29
TRIM41-209ENST00000515834 RUNDC1Q96C34 613 aa13.26□□□□□ -0.29
TRIM41-209ENST00000515834 ZHX3Q9H4I2 956 aa13.26□□□□□ -0.29
TRIM41-209ENST00000515834 USP47Q96K76 1375 aa13.26□□□□□ -0.29
TRIM41-209ENST00000515834 SYCP1Q15431 976 aa13.25□□□□□ -0.29
TRIM41-209ENST00000515834 MIA2Q96PC5 1412 aa13.25□□□□□ -0.29
TRIM41-209ENST00000515834 MYCNP04198 464 aaPredicted RBP13.25□□□□□ -0.29
TRIM41-209ENST00000515834 SMG6Q86US8 1419 aaKnown RBP13.25□□□□□ -0.29
TRIM41-209ENST00000515834 PPM1FP49593 454 aaPredicted RBP13.25□□□□□ -0.29
TRIM41-209ENST00000515834 MYL6BP14649 208 aa13.25□□□□□ -0.29
TRIM41-209ENST00000515834 CADPSQ9ULU8 1353 aa13.24□□□□□ -0.29
TRIM41-209ENST00000515834 NINLQ9Y2I6 1382 aa13.24□□□□□ -0.29
TRIM41-209ENST00000515834 CNTROBQ8N137 903 aa13.24□□□□□ -0.29
TRIM41-209ENST00000515834 MATR3P43243 847 aaKnown RBP eCLIP13.24□□□□□ -0.29
TRIM41-209ENST00000515834 CAGE1Q8TC20 777 aa13.24□□□□□ -0.29
TRIM41-209ENST00000515834 RRP1P56182 461 aaKnown RBP13.24□□□□□ -0.29
TRIM41-209ENST00000515834 CCDC173Q0VFZ6 552 aa13.23□□□□□ -0.29
TRIM41-209ENST00000515834 SKOR2Q2VWA4 1001 aaPredicted RBP13.23□□□□□ -0.29
TRIM41-209ENST00000515834 SURF6O75683 361 aaKnown RBP13.23□□□□□ -0.29
TRIM41-209ENST00000515834 BRPF1P55201 1214 aaPredicted RBP13.23□□□□□ -0.29
TRIM41-209ENST00000515834 CCDC30Q5VVM6 783 aa13.23□□□□□ -0.29
TRIM41-209ENST00000515834 XPCQ01831 940 aaPredicted RBP13.23□□□□□ -0.29
TRIM41-209ENST00000515834 CCDC158Q5M9N0 1113 aa13.23□□□□□ -0.29
TRIM41-209ENST00000515834 PDCL3Q9H2J4 239 aa13.23□□□□□ -0.29
TRIM41-209ENST00000515834 RDXP35241 583 aaKnown RBP13.23□□□□□ -0.29
TRIM41-209ENST00000515834 SIL1Q9H173 461 aa13.23□□□□□ -0.29
TRIM41-209ENST00000515834 SPINK5Q9NQ38 1064 aaPredicted RBP13.22□□□□□ -0.29
TRIM41-209ENST00000515834 AK7Q96M32 723 aa13.22□□□□□ -0.29
TRIM41-209ENST00000515834 MPHOSPH8Q99549 860 aa13.22□□□□□ -0.29
TRIM41-209ENST00000515834 CLASRPQ8N2M8 674 aaKnown RBP13.21□□□□□ -0.29
TRIM41-209ENST00000515834 SDF4Q9BRK5 362 aa13.21□□□□□ -0.29
TRIM41-209ENST00000515834 PDE4AP27815 886 aa13.21□□□□□ -0.29
TRIM41-209ENST00000515834 MROH2BQ7Z745 1585 aa13.21□□□□□ -0.29
TRIM41-209ENST00000515834 PSMA5P28066 241 aa13.21□□□□□ -0.3
TRIM41-209ENST00000515834 MAGEC2Q9UBF1 373 aaPredicted RBP13.21□□□□□ -0.3
TRIM41-209ENST00000515834 GAS2L2Q8NHY3 880 aa13.21□□□□□ -0.3
TRIM41-209ENST00000515834 CDR1P51861 262 aa13.2□□□□□ -0.3
TRIM41-209ENST00000515834 TXLNAP40222 546 aa13.2□□□□□ -0.3
TRIM41-209ENST00000515834 TTLL12Q14166 644 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms