RNA–Protein interactions for RNA: ENST00000515728.1

LINC01216-201, Transcript of long intergenic non-protein coding RNA 1216, humanhuman

TSL 5 BASIC

Gene LINC01216, Length 824 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01216-201ENST00000515728 CD46P15529 392 aa12.52□□□□□ -0.41
LINC01216-201ENST00000515728 USB1Q9BQ65 265 aaKnown RBP12.52□□□□□ -0.41
LINC01216-201ENST00000515728 AXIN1O15169 862 aa12.51□□□□□ -0.41
LINC01216-201ENST00000515728 CRIPAKQ8N1N5 446 aa12.51□□□□□ -0.41
LINC01216-201ENST00000515728 TOR4AQ9NXH8 423 aa12.51□□□□□ -0.41
LINC01216-201ENST00000515728 RNF19BQ6ZMZ0 732 aa12.5□□□□□ -0.41
LINC01216-201ENST00000515728 AVPP01185 164 aa12.49□□□□□ -0.41
LINC01216-201ENST00000515728 CLCN1P35523 988 aa12.48□□□□□ -0.41
LINC01216-201ENST00000515728 MMP16P51512 607 aa12.48□□□□□ -0.41
LINC01216-201ENST00000515728 REPIN1Q9BWE0 567 aaKnown RBP12.48□□□□□ -0.41
LINC01216-201ENST00000515728 KDM2AQ9Y2K7 1162 aa12.48□□□□□ -0.41
LINC01216-201ENST00000515728 WNT7AO00755 349 aa12.47□□□□□ -0.41
LINC01216-201ENST00000515728 MDM2Q00987 491 aaPredicted RBP12.47□□□□□ -0.41
LINC01216-201ENST00000515728 SNIP1Q8TAD8 396 aaKnown RBP12.47□□□□□ -0.41
LINC01216-201ENST00000515728 PRDM9Q9NQV7 894 aa12.47□□□□□ -0.41
LINC01216-201ENST00000515728 ST8SIA5O15466 376 aa12.46□□□□□ -0.41
LINC01216-201ENST00000515728 TRIM32Q13049 653 aa12.45□□□□□ -0.42
LINC01216-201ENST00000515728 NUTM1Q86Y26 1132 aa12.45□□□□□ -0.42
LINC01216-201ENST00000515728 SMCPP49901 116 aaPredicted RBP12.44□□□□□ -0.42
LINC01216-201ENST00000515728 GPCPD1Q9NPB8 672 aa12.44□□□□□ -0.42
LINC01216-201ENST00000515728 POTECB2RU33 542 aa12.43□□□□□ -0.42
LINC01216-201ENST00000515728 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
LINC01216-201ENST00000515728 DXOO77932 396 aaKnown RBP12.42□□□□□ -0.42
LINC01216-201ENST00000515728 C11orf95C9JLR9 678 aaPredicted RBP12.41□□□□□ -0.42
LINC01216-201ENST00000515728 TREML4Q6UXN2 200 aa12.39□□□□□ -0.43
LINC01216-201ENST00000515728 HOXA2O43364 376 aa12.38□□□□□ -0.43
LINC01216-201ENST00000515728 WNT7BP56706 349 aa12.38□□□□□ -0.43
LINC01216-201ENST00000515728 CCDC102AQ96A19 550 aa12.38□□□□□ -0.43
LINC01216-201ENST00000515728 SENP2Q9HC62 589 aa12.37□□□□□ -0.43
LINC01216-201ENST00000515728 MRGPRX2Q96LB1 330 aa12.36□□□□□ -0.43
LINC01216-201ENST00000515728 JUNDP17535 347 aa12.35□□□□□ -0.43
LINC01216-201ENST00000515728 FAM217BQ9NTX9 383 aaPredicted RBP12.35□□□□□ -0.43
LINC01216-201ENST00000515728 GMPR2Q9P2T1 348 aaKnown RBP12.34□□□□□ -0.43
LINC01216-201ENST00000515728 SMPD1P17405 629 aa12.33□□□□□ -0.44
LINC01216-201ENST00000515728 RC3H1Q5TC82 1133 aaKnown RBP12.33□□□□□ -0.44
LINC01216-201ENST00000515728 RETREG3Q86VR2 466 aa12.33□□□□□ -0.44
LINC01216-201ENST00000515728 FDX1P10109 184 aa12.3□□□□□ -0.44
LINC01216-201ENST00000515728 KIFC2Q96AC6 838 aa12.3□□□□□ -0.44
LINC01216-201ENST00000515728 DACH1Q9UI36 760 aa12.3□□□□□ -0.44
LINC01216-201ENST00000515728 C6orf229H3BNL8 230 aa12.29□□□□□ -0.44
LINC01216-201ENST00000515728 WFS1O76024 890 aa12.29□□□□□ -0.44
LINC01216-201ENST00000515728 NUDT12Q9BQG2 462 aa12.29□□□□□ -0.44
LINC01216-201ENST00000515728 ATP13A2Q9NQ11 1180 aa12.29□□□□□ -0.44
LINC01216-201ENST00000515728 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC01216-201ENST00000515728 J3QL48 77 aa12.27□□□□□ -0.45
LINC01216-201ENST00000515728 HLA-CQ95604 372 aa12.27□□□□□ -0.45
LINC01216-201ENST00000515728 MS4A1P11836 297 aa12.26□□□□□ -0.45
LINC01216-201ENST00000515728 SSTR3P32745 418 aaPredicted RBP12.26□□□□□ -0.45
LINC01216-201ENST00000515728 EHBP1Q8NDI1 1231 aa12.26□□□□□ -0.45
LINC01216-201ENST00000515728 SPDYE5A6NIY4 337 aa12.25□□□□□ -0.45
LINC01216-201ENST00000515728 ALDH1A1P00352 501 aa12.25□□□□□ -0.45
LINC01216-201ENST00000515728 TTLL12Q14166 644 aaPredicted RBP12.25□□□□□ -0.45
LINC01216-201ENST00000515728 DIXDC1Q155Q3 683 aa12.25□□□□□ -0.45
LINC01216-201ENST00000515728 WASF2Q9Y6W5 498 aa12.25□□□□□ -0.45
LINC01216-201ENST00000515728 GUCA2AQ02747 115 aa12.24□□□□□ -0.45
LINC01216-201ENST00000515728 CCNYL3P0C7X3 344 aa12.23□□□□□ -0.45
LINC01216-201ENST00000515728 SYMPKQ92797 1274 aaKnown RBP12.23□□□□□ -0.45
LINC01216-201ENST00000515728 TRIM47Q96LD4 638 aa12.23□□□□□ -0.45
LINC01216-201ENST00000515728 HPS1Q92902 700 aa12.22□□□□□ -0.45
LINC01216-201ENST00000515728 SKOR1P84550 965 aa12.21□□□□□ -0.45
LINC01216-201ENST00000515728 INSM1Q01101 510 aaPredicted RBP12.21□□□□□ -0.45
LINC01216-201ENST00000515728 PTPRNQ16849 979 aa12.2□□□□□ -0.46
LINC01216-201ENST00000515728 PLEKHG3A1L390 1219 aa12.19□□□□□ -0.46
LINC01216-201ENST00000515728 SPIRE2Q8WWL2 714 aa12.19□□□□□ -0.46
LINC01216-201ENST00000515728 BARGINQ6ZT62 677 aa12.18□□□□□ -0.46
LINC01216-201ENST00000515728 SLC16A10Q8TF71 515 aa12.18□□□□□ -0.46
LINC01216-201ENST00000515728 EVA1BQ9NVM1 165 aa12.17□□□□□ -0.46
LINC01216-201ENST00000515728 MTMR2Q13614 643 aa12.16□□□□□ -0.46
LINC01216-201ENST00000515728 DESI1Q6ICB0 168 aa12.16□□□□□ -0.46
LINC01216-201ENST00000515728 TERTO14746 1132 aaKnown RBP12.15□□□□□ -0.46
LINC01216-201ENST00000515728 GJA5P36382 358 aa12.15□□□□□ -0.46
LINC01216-201ENST00000515728 LCE2AQ5TA79 106 aaPredicted RBP12.15□□□□□ -0.46
LINC01216-201ENST00000515728 PTCRAQ6ISU1 281 aaPredicted RBP12.15□□□□□ -0.46
LINC01216-201ENST00000515728 CAPN5O15484 640 aaPredicted RBP12.14□□□□□ -0.47
LINC01216-201ENST00000515728 SNRPBP14678 240 aaKnown RBP12.14□□□□□ -0.47
LINC01216-201ENST00000515728 KCNH2Q12809 1159 aa12.14□□□□□ -0.47
LINC01216-201ENST00000515728 AMHR2Q16671 573 aa12.14□□□□□ -0.47
LINC01216-201ENST00000515728 PRR7Q8TB68 274 aa12.14□□□□□ -0.47
LINC01216-201ENST00000515728 STK17AQ9UEE5 414 aa12.14□□□□□ -0.47
LINC01216-201ENST00000515728 PCDHGC3Q9UN70 934 aa12.14□□□□□ -0.47
LINC01216-201ENST00000515728 ZMYND10O75800 440 aa12.13□□□□□ -0.47
LINC01216-201ENST00000515728 MOXD2PA6NHM9 499 aa12.12□□□□□ -0.47
LINC01216-201ENST00000515728 SIAH2O43255 324 aa12.12□□□□□ -0.47
LINC01216-201ENST00000515728 VARSP26640 1264 aaKnown RBP12.12□□□□□ -0.47
LINC01216-201ENST00000515728 SH3BP2P78314 561 aa12.12□□□□□ -0.47
LINC01216-201ENST00000515728 NFX1Q12986 1120 aaKnown RBP12.12□□□□□ -0.47
LINC01216-201ENST00000515728 UNC93B1Q9H1C4 597 aa12.12□□□□□ -0.47
LINC01216-201ENST00000515728 WIPF1O43516 503 aa12.11□□□□□ -0.47
LINC01216-201ENST00000515728 NDUFV2P19404 249 aa12.11□□□□□ -0.47
LINC01216-201ENST00000515728 GIGYF2Q6Y7W6 1299 aaKnown RBP12.11□□□□□ -0.47
LINC01216-201ENST00000515728 BEGAINQ9BUH8 593 aa12.11□□□□□ -0.47
LINC01216-201ENST00000515728 MPNDQ8N594 471 aa12.09□□□□□ -0.47
LINC01216-201ENST00000515728 BAP1Q92560 729 aa12.09□□□□□ -0.47
LINC01216-201ENST00000515728 FAM181BA6NEQ2 426 aa12.08□□□□□ -0.48
LINC01216-201ENST00000515728 CTHP32929 405 aa12.08□□□□□ -0.48
LINC01216-201ENST00000515728 NPAS3Q8IXF0 933 aa12.07□□□□□ -0.48
LINC01216-201ENST00000515728 FAM174AQ8TBP5 190 aa12.07□□□□□ -0.48
LINC01216-201ENST00000515728 ZC3H15Q8WU90 426 aaKnown RBP12.07□□□□□ -0.48
LINC01216-201ENST00000515728 ZNF511Q8NB15 262 aa12.06□□□□□ -0.48
LINC01216-201ENST00000515728 SCARF1Q14162 830 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms