RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 USP32Q8NFA0 1604 aa16.32■□□□□ 0.2
LMNA-224ENST00000515711 TULP4Q9NRJ4 1543 aa16.32■□□□□ 0.2
LMNA-224ENST00000515711 LRPPRCP42704 1394 aaKnown RBP16.31■□□□□ 0.2
LMNA-224ENST00000515711 TMEM132EQ6IEE7 984 aa16.31■□□□□ 0.2
LMNA-224ENST00000515711 NPHP4O75161 1426 aaPredicted RBP16.3■□□□□ 0.2
LMNA-224ENST00000515711 PARD3Q8TEW0 1356 aa16.3■□□□□ 0.2
LMNA-224ENST00000515711 PLEKHG1Q9ULL1 1385 aa16.3■□□□□ 0.2
LMNA-224ENST00000515711 NPC1L1Q9UHC9 1359 aa16.29■□□□□ 0.2
LMNA-224ENST00000515711 NINLQ9Y2I6 1382 aa16.29■□□□□ 0.2
LMNA-224ENST00000515711 STRCP1A6NGW2 1772 aa16.29■□□□□ 0.2
LMNA-224ENST00000515711 EVC2Q86UK5 1308 aa16.29■□□□□ 0.2
LMNA-224ENST00000515711 UPF1Q92900 1129 aaKnown RBP eCLIP16.29■□□□□ 0.2
LMNA-224ENST00000515711 TECPR2O15040 1411 aa16.28■□□□□ 0.2
LMNA-224ENST00000515711 MYBBP1AQ9BQG0 1328 aaKnown RBP16.28■□□□□ 0.2
LMNA-224ENST00000515711 ANKLE2Q86XL3 938 aa16.28■□□□□ 0.2
LMNA-224ENST00000515711 PANK3Q9H999 370 aa16.28■□□□□ 0.2
LMNA-224ENST00000515711 ABCC11Q96J66 1382 aa16.27■□□□□ 0.2
LMNA-224ENST00000515711 PER1O15534 1290 aaPredicted RBP16.27■□□□□ 0.2
LMNA-224ENST00000515711 BRD4O60885 1362 aaPredicted RBP16.26■□□□□ 0.19
LMNA-224ENST00000515711 MRS2Q9HD23 443 aa16.26■□□□□ 0.19
LMNA-224ENST00000515711 EID1Q9Y6B2 187 aa16.25■□□□□ 0.19
LMNA-224ENST00000515711 FAM135BQ49AJ0 1406 aa16.25■□□□□ 0.19
LMNA-224ENST00000515711 THEMISQ8N1K5 641 aaPredicted RBP16.24■□□□□ 0.19
LMNA-224ENST00000515711 KNSTRNQ9Y448 316 aa16.24■□□□□ 0.19
LMNA-224ENST00000515711 ADAMTS13Q76LX8 1427 aa16.24■□□□□ 0.19
LMNA-224ENST00000515711 ATAD2Q6PL18 1390 aa16.24■□□□□ 0.19
LMNA-224ENST00000515711 MED14O60244 1454 aa16.23■□□□□ 0.19
LMNA-224ENST00000515711 ADGRB2O60241 1585 aa16.23■□□□□ 0.19
LMNA-224ENST00000515711 SRCAPQ6ZRS2 3230 aa16.23■□□□□ 0.19
LMNA-224ENST00000515711 SIRT1Q96EB6 747 aa16.22■□□□□ 0.19
LMNA-224ENST00000515711 POGKQ9P215 609 aa16.22■□□□□ 0.19
LMNA-224ENST00000515711 NLRP13Q86W25 1043 aa16.21■□□□□ 0.19
LMNA-224ENST00000515711 STK26Q9P289 416 aa16.21■□□□□ 0.19
LMNA-224ENST00000515711 ANKRD26Q9UPS8 1709 aa16.21■□□□□ 0.19
LMNA-224ENST00000515711 PRAM1Q96QH2 718 aa16.2■□□□□ 0.18
LMNA-224ENST00000515711 METP08581 1390 aa16.2■□□□□ 0.18
LMNA-224ENST00000515711 ANKRD36BQ8N2N9 1353 aa16.19■□□□□ 0.18
LMNA-224ENST00000515711 TXNDC2Q86VQ3 553 aa16.19■□□□□ 0.18
LMNA-224ENST00000515711 XRN1Q8IZH2 1706 aaKnown RBP16.19■□□□□ 0.18
LMNA-224ENST00000515711 AMER1Q5JTC6 1135 aaPredicted RBP16.17■□□□□ 0.18
LMNA-224ENST00000515711 TMC1Q8TDI8 760 aa16.17■□□□□ 0.18
LMNA-224ENST00000515711 BCANQ96GW7 911 aa16.17■□□□□ 0.18
LMNA-224ENST00000515711 PTCH1Q13635 1447 aa16.17■□□□□ 0.18
LMNA-224ENST00000515711 NSD2O96028 1365 aa16.16■□□□□ 0.18
LMNA-224ENST00000515711 PIK3R4Q99570 1358 aa16.16■□□□□ 0.18
LMNA-224ENST00000515711 LTKP29376 864 aa16.16■□□□□ 0.18
LMNA-224ENST00000515711 KIF20BQ96Q89 1820 aa16.16■□□□□ 0.18
LMNA-224ENST00000515711 NSD3Q9BZ95 1437 aa16.16■□□□□ 0.18
LMNA-224ENST00000515711 ITSN1Q15811 1721 aa16.16■□□□□ 0.18
LMNA-224ENST00000515711 ATP7BP35670 1465 aa16.16■□□□□ 0.18
LMNA-224ENST00000515711 INSRP06213 1382 aa16.15■□□□□ 0.18
LMNA-224ENST00000515711 CCDC184Q52MB2 194 aa16.15■□□□□ 0.18
LMNA-224ENST00000515711 CC2D1BQ5T0F9 858 aaKnown RBP16.14■□□□□ 0.17
LMNA-224ENST00000515711 TBX22Q9Y458 520 aa16.14■□□□□ 0.17
LMNA-224ENST00000515711 MINK1Q8N4C8 1332 aaPredicted RBP16.14■□□□□ 0.17
LMNA-224ENST00000515711 SRPK2P78362 688 aaKnown RBP16.13■□□□□ 0.17
LMNA-224ENST00000515711 SAFB2Q14151 953 aaKnown RBP eCLIP16.13■□□□□ 0.17
LMNA-224ENST00000515711 TOPAZ1Q8N9V7 1692 aa16.13■□□□□ 0.17
LMNA-224ENST00000515711 AKAP12Q02952 1782 aa16.13■□□□□ 0.17
LMNA-224ENST00000515711 CHD2O14647 1828 aaKnown RBP16.12■□□□□ 0.17
LMNA-224ENST00000515711 HNRNPUQ00839 825 aaKnown RBP eCLIP16.12■□□□□ 0.17
LMNA-224ENST00000515711 CNGB1Q14028 1251 aaPredicted RBP16.12■□□□□ 0.17
LMNA-224ENST00000515711 MON2Q7Z3U7 1717 aa16.11■□□□□ 0.17
LMNA-224ENST00000515711 XIRP1Q702N8 1843 aaKnown RBP16.11■□□□□ 0.17
LMNA-224ENST00000515711 FAM9BQ8IZU0 186 aa16.11■□□□□ 0.17
LMNA-224ENST00000515711 PLEKHH1Q9ULM0 1364 aa16.11■□□□□ 0.17
LMNA-224ENST00000515711 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.11■□□□□ 0.17
LMNA-224ENST00000515711 PNISRQ8TF01 805 aaKnown RBP16.1■□□□□ 0.17
LMNA-224ENST00000515711 SLC12A5Q9H2X9 1139 aa16.1■□□□□ 0.17
LMNA-224ENST00000515711 CABP2Q9NPB3 220 aa16.1■□□□□ 0.17
LMNA-224ENST00000515711 TERF2IPQ9NYB0 399 aa16.1■□□□□ 0.17
LMNA-224ENST00000515711 ROBO1Q9Y6N7 1651 aa16.1■□□□□ 0.17
LMNA-224ENST00000515711 CGNL1Q0VF96 1302 aa16.1■□□□□ 0.17
LMNA-224ENST00000515711 CDC42BPGQ6DT37 1551 aa16.09■□□□□ 0.17
LMNA-224ENST00000515711 CDK19Q9BWU1 502 aa16.09■□□□□ 0.17
LMNA-224ENST00000515711 CARD14Q9BXL6 1004 aa16.09■□□□□ 0.17
LMNA-224ENST00000515711 ZBED9Q6R2W3 1325 aa16.09■□□□□ 0.17
LMNA-224ENST00000515711 PTPRUQ92729 1446 aa16.09■□□□□ 0.17
LMNA-224ENST00000515711 A0A1W2PP64 1363 aa16.08■□□□□ 0.16
LMNA-224ENST00000515711 ROBO2Q9HCK4 1378 aa16.08■□□□□ 0.16
LMNA-224ENST00000515711 CD163L1Q9NR16 1453 aa16.08■□□□□ 0.16
LMNA-224ENST00000515711 PPP2R1AP30153 589 aa16.07■□□□□ 0.16
LMNA-224ENST00000515711 HDGFL2Q7Z4V5 671 aaPredicted RBP16.07■□□□□ 0.16
LMNA-224ENST00000515711 WAPLQ7Z5K2 1190 aa16.07■□□□□ 0.16
LMNA-224ENST00000515711 WASLO00401 505 aaPredicted RBP16.06■□□□□ 0.16
LMNA-224ENST00000515711 LRP6O75581 1613 aa16.05■□□□□ 0.16
LMNA-224ENST00000515711 BLMP54132 1417 aaPredicted RBP16.05■□□□□ 0.16
LMNA-224ENST00000515711 NWD1Q149M9 1564 aa16.04■□□□□ 0.16
LMNA-224ENST00000515711 JCADQ9P266 1359 aa16.04■□□□□ 0.16
LMNA-224ENST00000515711 RBM33Q96EV2 1170 aaKnown RBP16.04■□□□□ 0.16
LMNA-224ENST00000515711 SLC26A8Q96RN1 970 aa16.04■□□□□ 0.16
LMNA-224ENST00000515711 PPIP5K1Q6PFW1 1433 aa16.03■□□□□ 0.16
LMNA-224ENST00000515711 TMEM94Q12767 1356 aa16.03■□□□□ 0.16
LMNA-224ENST00000515711 FMN2Q9NZ56 1722 aa16.03■□□□□ 0.16
LMNA-224ENST00000515711 NRKQ7Z2Y5 1582 aa16.03■□□□□ 0.16
LMNA-224ENST00000515711 MEX3CQ5U5Q3 659 aaKnown RBP16.02■□□□□ 0.16
LMNA-224ENST00000515711 ZNF772Q68DY9 489 aaPredicted RBP16.02■□□□□ 0.16
LMNA-224ENST00000515711 AMOTL2Q9Y2J4 779 aa16.02■□□□□ 0.16
LMNA-224ENST00000515711 EDC4Q6P2E9 1401 aaKnown RBP16.02■□□□□ 0.15
LMNA-224ENST00000515711 POLR3AO14802 1390 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms