RNA–Protein interactions for RNA: ENST00000515663.5

CAST-244, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-244ENST00000515663 QRICH2Q9H0J4 1663 aa12.17□□□□□ -0.46
CAST-244ENST00000515663 MYT1Q01538 1121 aa12.17□□□□□ -0.46
CAST-244ENST00000515663 PRAM1Q96QH2 718 aa12.16□□□□□ -0.46
CAST-244ENST00000515663 POLR3GLQ9BT43 218 aa12.16□□□□□ -0.46
CAST-244ENST00000515663 STK26Q9P289 416 aa12.16□□□□□ -0.46
CAST-244ENST00000515663 KTN1Q86UP2 1357 aaKnown RBP12.16□□□□□ -0.46
CAST-244ENST00000515663 PIK3R4Q99570 1358 aa12.16□□□□□ -0.46
CAST-244ENST00000515663 KNDC1Q76NI1 1749 aa12.16□□□□□ -0.46
CAST-244ENST00000515663 CPS1P31327 1500 aa12.16□□□□□ -0.46
CAST-244ENST00000515663 TULP4Q9NRJ4 1543 aa12.16□□□□□ -0.46
CAST-244ENST00000515663 ANKLE2Q86XL3 938 aa12.15□□□□□ -0.46
CAST-244ENST00000515663 EVC2Q86UK5 1308 aa12.15□□□□□ -0.46
CAST-244ENST00000515663 PANK3Q9H999 370 aa12.14□□□□□ -0.47
CAST-244ENST00000515663 MYOM1P52179 1685 aa12.14□□□□□ -0.47
CAST-244ENST00000515663 KDM4FA0A1W2PPD8 638 aa12.14□□□□□ -0.47
CAST-244ENST00000515663 NPC1L1Q9UHC9 1359 aa12.14□□□□□ -0.47
CAST-244ENST00000515663 PTPRUQ92729 1446 aa12.13□□□□□ -0.47
CAST-244ENST00000515663 NCBP3Q53F19 620 aaKnown RBP12.13□□□□□ -0.47
CAST-244ENST00000515663 POGKQ9P215 609 aa12.13□□□□□ -0.47
CAST-244ENST00000515663 PLEKHH1Q9ULM0 1364 aa12.12□□□□□ -0.47
CAST-244ENST00000515663 SLC26A8Q96RN1 970 aa12.12□□□□□ -0.47
CAST-244ENST00000515663 ROBO2Q9HCK4 1378 aa12.11□□□□□ -0.47
CAST-244ENST00000515663 NINLQ9Y2I6 1382 aa12.11□□□□□ -0.47
CAST-244ENST00000515663 RALBP1Q15311 655 aa12.11□□□□□ -0.47
CAST-244ENST00000515663 WAPLQ7Z5K2 1190 aa12.11□□□□□ -0.47
CAST-244ENST00000515663 BCANQ96GW7 911 aa12.11□□□□□ -0.47
CAST-244ENST00000515663 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
CAST-244ENST00000515663 PARD3Q8TEW0 1356 aa12.1□□□□□ -0.47
CAST-244ENST00000515663 ATAD2Q6PL18 1390 aa12.1□□□□□ -0.47
CAST-244ENST00000515663 AMER1Q5JTC6 1135 aaPredicted RBP12.09□□□□□ -0.47
CAST-244ENST00000515663 AMOTL2Q9Y2J4 779 aa12.09□□□□□ -0.47
CAST-244ENST00000515663 MINK1Q8N4C8 1332 aaPredicted RBP12.09□□□□□ -0.47
CAST-244ENST00000515663 CARD14Q9BXL6 1004 aa12.08□□□□□ -0.47
CAST-244ENST00000515663 XRN1Q8IZH2 1706 aaKnown RBP12.08□□□□□ -0.48
CAST-244ENST00000515663 NPHP4O75161 1426 aaPredicted RBP12.08□□□□□ -0.48
CAST-244ENST00000515663 ADGRB2O60241 1585 aa12.08□□□□□ -0.48
CAST-244ENST00000515663 SAFB2Q14151 953 aaKnown RBP eCLIP12.08□□□□□ -0.48
CAST-244ENST00000515663 CDK19Q9BWU1 502 aa12.08□□□□□ -0.48
CAST-244ENST00000515663 SLC12A5Q9H2X9 1139 aa12.08□□□□□ -0.48
CAST-244ENST00000515663 WASLO00401 505 aaPredicted RBP12.07□□□□□ -0.48
CAST-244ENST00000515663 CABP2Q9NPB3 220 aa12.07□□□□□ -0.48
CAST-244ENST00000515663 KNSTRNQ9Y448 316 aa12.07□□□□□ -0.48
CAST-244ENST00000515663 ANKRD36BQ8N2N9 1353 aa12.06□□□□□ -0.48
CAST-244ENST00000515663 MYBBP1AQ9BQG0 1328 aaKnown RBP12.05□□□□□ -0.48
CAST-244ENST00000515663 SRPK2P78362 688 aaKnown RBP12.05□□□□□ -0.48
CAST-244ENST00000515663 CCDC184Q52MB2 194 aa12.05□□□□□ -0.48
CAST-244ENST00000515663 CD163L1Q9NR16 1453 aa12.04□□□□□ -0.48
CAST-244ENST00000515663 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.04□□□□□ -0.48
CAST-244ENST00000515663 KCNA6P17658 529 aa12.03□□□□□ -0.48
CAST-244ENST00000515663 USP32Q8NFA0 1604 aa12.03□□□□□ -0.48
CAST-244ENST00000515663 BRD4O60885 1362 aaPredicted RBP12.03□□□□□ -0.48
CAST-244ENST00000515663 NCKAP5LQ9HCH0 1330 aa12.03□□□□□ -0.48
CAST-244ENST00000515663 TMC1Q8TDI8 760 aa12.02□□□□□ -0.48
CAST-244ENST00000515663 CHD2O14647 1828 aaKnown RBP12.02□□□□□ -0.48
CAST-244ENST00000515663 LMTK3Q96Q04 1460 aa12.02□□□□□ -0.48
CAST-244ENST00000515663 NLRP13Q86W25 1043 aa12.02□□□□□ -0.49
CAST-244ENST00000515663 TERF2IPQ9NYB0 399 aa12.02□□□□□ -0.49
CAST-244ENST00000515663 CCDC61Q9Y6R9 512 aa12.02□□□□□ -0.49
CAST-244ENST00000515663 ATP7BP35670 1465 aa12.02□□□□□ -0.49
CAST-244ENST00000515663 CPSF1Q10570 1443 aaKnown RBP12.01□□□□□ -0.49
CAST-244ENST00000515663 NWD1Q149M9 1564 aa12.01□□□□□ -0.49
CAST-244ENST00000515663 A0A1W2PP64 1363 aa12.01□□□□□ -0.49
CAST-244ENST00000515663 CC2D1BQ5T0F9 858 aaKnown RBP12.01□□□□□ -0.49
CAST-244ENST00000515663 NUDT16Q96DE0 195 aaKnown RBP12.01□□□□□ -0.49
CAST-244ENST00000515663 MRS2Q9HD23 443 aa12.01□□□□□ -0.49
CAST-244ENST00000515663 NSD3Q9BZ95 1437 aa12□□□□□ -0.49
CAST-244ENST00000515663 PRR36Q9H6K5 1346 aa12□□□□□ -0.49
CAST-244ENST00000515663 NSD2O96028 1365 aa12□□□□□ -0.49
CAST-244ENST00000515663 CABP1Q9NZU7 370 aa12□□□□□ -0.49
CAST-244ENST00000515663 PLEKHG3A1L390 1219 aa11.99□□□□□ -0.49
CAST-244ENST00000515663 PNISRQ8TF01 805 aaKnown RBP11.99□□□□□ -0.49
CAST-244ENST00000515663 CGNL1Q0VF96 1302 aa11.99□□□□□ -0.49
CAST-244ENST00000515663 PPIP5K1Q6PFW1 1433 aa11.97□□□□□ -0.49
CAST-244ENST00000515663 ANKARQ7Z5J8 1434 aa11.97□□□□□ -0.49
CAST-244ENST00000515663 PPP2R1AP30153 589 aa11.97□□□□□ -0.49
CAST-244ENST00000515663 HDGFL2Q7Z4V5 671 aaPredicted RBP11.97□□□□□ -0.49
CAST-244ENST00000515663 ZNF692Q9BU19 519 aaPredicted RBP11.97□□□□□ -0.49
CAST-244ENST00000515663 NKTRP30414 1462 aaKnown RBP11.96□□□□□ -0.49
CAST-244ENST00000515663 INSRP06213 1382 aa11.96□□□□□ -0.5
CAST-244ENST00000515663 CDC42BPGQ6DT37 1551 aa11.96□□□□□ -0.5
CAST-244ENST00000515663 TOPAZ1Q8N9V7 1692 aa11.96□□□□□ -0.5
CAST-244ENST00000515663 HSPA2P54652 639 aa11.95□□□□□ -0.5
CAST-244ENST00000515663 ADGRL3Q9HAR2 1447 aa11.95□□□□□ -0.5
CAST-244ENST00000515663 NCOA3Q9Y6Q9 1424 aa11.95□□□□□ -0.5
CAST-244ENST00000515663 FYB1O15117 783 aa11.95□□□□□ -0.5
CAST-244ENST00000515663 CENPBP07199 599 aaPredicted RBP11.95□□□□□ -0.5
CAST-244ENST00000515663 YTHDC1Q96MU7 727 aaKnown RBP11.95□□□□□ -0.5
CAST-244ENST00000515663 EDC4Q6P2E9 1401 aaKnown RBP11.94□□□□□ -0.5
CAST-244ENST00000515663 POLR3AO14802 1390 aaPredicted RBP11.93□□□□□ -0.5
CAST-244ENST00000515663 CNGB1Q14028 1251 aaPredicted RBP11.93□□□□□ -0.5
CAST-244ENST00000515663 SSH2Q76I76 1423 aa11.93□□□□□ -0.5
CAST-244ENST00000515663 FMN2Q9NZ56 1722 aa11.92□□□□□ -0.5
CAST-244ENST00000515663 STRCQ7RTU9 1775 aa11.92□□□□□ -0.5
CAST-244ENST00000515663 MORC1Q86VD1 984 aa11.92□□□□□ -0.5
CAST-244ENST00000515663 NALCNQ8IZF0 1738 aa11.92□□□□□ -0.5
CAST-244ENST00000515663 ILDR1Q86SU0 546 aaPredicted RBP11.91□□□□□ -0.5
CAST-244ENST00000515663 ACEP12821 1306 aa11.91□□□□□ -0.5
CAST-244ENST00000515663 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
CAST-244ENST00000515663 AKAP12Q02952 1782 aa11.9□□□□□ -0.5
CAST-244ENST00000515663 FAM9BQ8IZU0 186 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms