RNA–Protein interactions for RNA: ENST00000515499.5

TRIM41-208, Transcript of tripartite motif containing 41, humanhuman

TSL 3

Gene TRIM41, Length 914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-208ENST00000515499 CADPS2Q86UW7 1296 aa29.64■■■□□ 2.34
TRIM41-208ENST00000515499 DCCP43146 1447 aa29.63■■■□□ 2.33
TRIM41-208ENST00000515499 NALCNQ8IZF0 1738 aa29.63■■■□□ 2.33
TRIM41-208ENST00000515499 ATF3P18847 181 aa29.63■■■□□ 2.33
TRIM41-208ENST00000515499 ARHGEF28Q8N1W1 1705 aaKnown RBP29.62■■■□□ 2.33
TRIM41-208ENST00000515499 CARD11Q9BXL7 1154 aa29.6■■■□□ 2.33
TRIM41-208ENST00000515499 SAFB2Q14151 953 aaKnown RBP eCLIP29.59■■■□□ 2.33
TRIM41-208ENST00000515499 SLAIN2Q9P270 581 aa29.57■■■□□ 2.32
TRIM41-208ENST00000515499 PIP4K2BP78356 416 aa29.54■■■□□ 2.32
TRIM41-208ENST00000515499 CDC42BPGQ6DT37 1551 aa29.53■■■□□ 2.32
TRIM41-208ENST00000515499 EIF3AQ14152 1382 aaKnown RBP29.52■■■□□ 2.32
TRIM41-208ENST00000515499 CENPJQ9HC77 1338 aaPredicted RBP29.52■■■□□ 2.32
TRIM41-208ENST00000515499 MINK1Q8N4C8 1332 aaPredicted RBP29.5■■■□□ 2.31
TRIM41-208ENST00000515499 SCAF1Q9H7N4 1312 aaKnown RBP29.5■■■□□ 2.31
TRIM41-208ENST00000515499 MST1RQ04912 1400 aa29.5■■■□□ 2.31
TRIM41-208ENST00000515499 ADGRB2O60241 1585 aa29.48■■■□□ 2.31
TRIM41-208ENST00000515499 HIRIP3Q9BW71 556 aaPredicted RBP29.47■■■□□ 2.31
TRIM41-208ENST00000515499 C1orf167Q5SNV9 1468 aa29.44■■■□□ 2.3
TRIM41-208ENST00000515499 ILDR1Q86SU0 546 aaPredicted RBP29.44■■■□□ 2.3
TRIM41-208ENST00000515499 FMN2Q9NZ56 1722 aa29.43■■■□□ 2.3
TRIM41-208ENST00000515499 WASLO00401 505 aaPredicted RBP29.43■■■□□ 2.3
TRIM41-208ENST00000515499 QRICH2Q9H0J4 1663 aa29.43■■■□□ 2.3
TRIM41-208ENST00000515499 ROBO1Q9Y6N7 1651 aa29.41■■■□□ 2.3
TRIM41-208ENST00000515499 BRINP3Q76B58 766 aa29.39■■■□□ 2.3
TRIM41-208ENST00000515499 NUTM2FA1L443 756 aa29.38■■■□□ 2.29
TRIM41-208ENST00000515499 USP47Q96K76 1375 aa29.38■■■□□ 2.29
TRIM41-208ENST00000515499 CDK19Q9BWU1 502 aa29.37■■■□□ 2.29
TRIM41-208ENST00000515499 SBNO2Q9Y2G9 1366 aa29.37■■■□□ 2.29
TRIM41-208ENST00000515499 ANKARQ7Z5J8 1434 aa29.36■■■□□ 2.29
TRIM41-208ENST00000515499 ST20-MTHFSA0A0A6YYL1 179 aa29.35■■■□□ 2.29
TRIM41-208ENST00000515499 ORAI2Q96SN7 254 aa29.35■■■□□ 2.29
TRIM41-208ENST00000515499 ESCO1Q5FWF5 840 aa29.34■■■□□ 2.29
TRIM41-208ENST00000515499 TULP4Q9NRJ4 1543 aa29.34■■■□□ 2.29
TRIM41-208ENST00000515499 EVC2Q86UK5 1308 aa29.33■■■□□ 2.29
TRIM41-208ENST00000515499 SLC24A1O60721 1099 aa29.31■■■□□ 2.28
TRIM41-208ENST00000515499 USP32Q8NFA0 1604 aa29.31■■■□□ 2.28
TRIM41-208ENST00000515499 HSPA1LP34931 641 aa29.3■■■□□ 2.28
TRIM41-208ENST00000515499 NUDT16Q96DE0 195 aaKnown RBP29.3■■■□□ 2.28
TRIM41-208ENST00000515499 RGPD8O14715 1765 aaPredicted RBP29.29■■■□□ 2.28
TRIM41-208ENST00000515499 PRR36Q9H6K5 1346 aa29.29■■■□□ 2.28
TRIM41-208ENST00000515499 SRPK2P78362 688 aaKnown RBP29.29■■■□□ 2.28
TRIM41-208ENST00000515499 TESK2Q96S53 571 aa29.29■■■□□ 2.28
TRIM41-208ENST00000515499 EIF4G2P78344 907 aaKnown RBP eCLIP29.27■■■□□ 2.28
TRIM41-208ENST00000515499 ATP7BP35670 1465 aa29.26■■■□□ 2.27
TRIM41-208ENST00000515499 CABP2Q9NPB3 220 aa29.26■■■□□ 2.27
TRIM41-208ENST00000515499 PHF8Q9UPP1 1060 aa29.26■■■□□ 2.27
TRIM41-208ENST00000515499 AHDC1Q5TGY3 1603 aaPredicted RBP29.26■■■□□ 2.27
TRIM41-208ENST00000515499 CCDC61Q9Y6R9 512 aa29.25■■■□□ 2.27
TRIM41-208ENST00000515499 KIF1AQ12756 1690 aa29.23■■■□□ 2.27
TRIM41-208ENST00000515499 NHSL1Q5SYE7 1610 aa29.23■■■□□ 2.27
TRIM41-208ENST00000515499 PHLPP1O60346 1717 aa29.23■■■□□ 2.27
TRIM41-208ENST00000515499 NPHP3Q7Z494 1330 aa29.21■■■□□ 2.27
TRIM41-208ENST00000515499 ITSN1Q15811 1721 aa29.21■■■□□ 2.27
TRIM41-208ENST00000515499 FOXO3O43524 673 aa29.2■■■□□ 2.26
TRIM41-208ENST00000515499 PMFBP1Q8TBY8 1022 aa29.2■■■□□ 2.26
TRIM41-208ENST00000515499 DDX17Q92841 729 aaKnown RBP29.2■■■□□ 2.26
TRIM41-208ENST00000515499 PUS7Q96PZ0 661 aaKnown RBP29.2■■■□□ 2.26
TRIM41-208ENST00000515499 HSPA5P11021 654 aaKnown RBP29.19■■■□□ 2.26
TRIM41-208ENST00000515499 PLEKHG3A1L390 1219 aa29.18■■■□□ 2.26
TRIM41-208ENST00000515499 TMF1P82094 1093 aa29.18■■■□□ 2.26
TRIM41-208ENST00000515499 TOPAZ1Q8N9V7 1692 aa29.17■■■□□ 2.26
TRIM41-208ENST00000515499 SOS2Q07890 1332 aaPredicted RBP29.17■■■□□ 2.26
TRIM41-208ENST00000515499 COL16A1Q07092 1604 aaPredicted RBP29.16■■■□□ 2.26
TRIM41-208ENST00000515499 ATAD2Q6PL18 1390 aa29.16■■■□□ 2.26
TRIM41-208ENST00000515499 ZEB1P37275 1124 aaPredicted RBP29.16■■■□□ 2.26
TRIM41-208ENST00000515499 PPIP5K1Q6PFW1 1433 aa29.14■■■□□ 2.26
TRIM41-208ENST00000515499 NGDNQ8NEJ9 315 aaKnown RBP29.14■■■□□ 2.26
TRIM41-208ENST00000515499 PSME1Q06323 249 aa29.13■■■□□ 2.25
TRIM41-208ENST00000515499 LRRC59Q96AG4 307 aaKnown RBP29.13■■■□□ 2.25
TRIM41-208ENST00000515499 PXDNQ92626 1479 aa29.12■■■□□ 2.25
TRIM41-208ENST00000515499 CDCA8Q53HL2 280 aa29.12■■■□□ 2.25
TRIM41-208ENST00000515499 KRT28Q7Z3Y7 464 aa29.12■■■□□ 2.25
TRIM41-208ENST00000515499 CABP1Q9NZU7 370 aa29.12■■■□□ 2.25
TRIM41-208ENST00000515499 DISP3Q9P2K9 1392 aa29.12■■■□□ 2.25
TRIM41-208ENST00000515499 POLR3AO14802 1390 aaPredicted RBP29.11■■■□□ 2.25
TRIM41-208ENST00000515499 ACEP12821 1306 aa29.1■■■□□ 2.25
TRIM41-208ENST00000515499 XPCQ01831 940 aaPredicted RBP29.09■■■□□ 2.25
TRIM41-208ENST00000515499 JCADQ9P266 1359 aa29.08■■■□□ 2.25
TRIM41-208ENST00000515499 SBNO1A3KN83 1393 aa29.04■■■□□ 2.24
TRIM41-208ENST00000515499 TMC1Q8TDI8 760 aa29.03■■■□□ 2.24
TRIM41-208ENST00000515499 SPATA31A3Q5VYP0 1347 aa29.02■■■□□ 2.24
TRIM41-208ENST00000515499 ZNF692Q9BU19 519 aaPredicted RBP29.02■■■□□ 2.24
TRIM41-208ENST00000515499 NINLQ9Y2I6 1382 aa29.01■■■□□ 2.24
TRIM41-208ENST00000515499 SLC12A5Q9H2X9 1139 aa29.01■■■□□ 2.23
TRIM41-208ENST00000515499 SHPRHQ149N8 1683 aa29■■■□□ 2.23
TRIM41-208ENST00000515499 PNPLA6Q8IY17 1366 aa28.99■■■□□ 2.23
TRIM41-208ENST00000515499 TRPM3Q9HCF6 1732 aaPredicted RBP28.98■■■□□ 2.23
TRIM41-208ENST00000515499 TNS3Q68CZ2 1445 aa28.98■■■□□ 2.23
TRIM41-208ENST00000515499 BRD4O60885 1362 aaPredicted RBP28.98■■■□□ 2.23
TRIM41-208ENST00000515499 CPSF1Q10570 1443 aaKnown RBP28.97■■■□□ 2.23
TRIM41-208ENST00000515499 TERF2IPQ9NYB0 399 aa28.96■■■□□ 2.23
TRIM41-208ENST00000515499 SPATA31A6Q5VVP1 1343 aa28.95■■■□□ 2.23
TRIM41-208ENST00000515499 USP6P35125 1406 aa28.95■■■□□ 2.23
TRIM41-208ENST00000515499 PAK3O75914 559 aaPredicted RBP28.95■■■□□ 2.22
TRIM41-208ENST00000515499 HDGFL2Q7Z4V5 671 aaPredicted RBP28.95■■■□□ 2.22
TRIM41-208ENST00000515499 AKAP12Q02952 1782 aa28.95■■■□□ 2.22
TRIM41-208ENST00000515499 ARHGEF10O15013 1369 aa28.94■■■□□ 2.22
TRIM41-208ENST00000515499 CD163L1Q9NR16 1453 aa28.93■■■□□ 2.22
TRIM41-208ENST00000515499 C11orf95C9JLR9 678 aaPredicted RBP28.93■■■□□ 2.22
TRIM41-208ENST00000515499 KTN1Q86UP2 1357 aaKnown RBP28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms