RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	ASXL1	Q8IXJ9	1541 aa		14.06	□□□□□ -0.16
CDK18-222	ENST00000515494	SETBP1	Q9Y6X0	1596 aa		14.06	□□□□□ -0.16
CDK18-222	ENST00000515494	YTHDC2	Q9H6S0	1430 aa	Known RBP	14.06	□□□□□ -0.16
CDK18-222	ENST00000515494	FER1L4	A9Z1Z3	1794 aa		14.05	□□□□□ -0.16
CDK18-222	ENST00000515494	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	14.05	□□□□□ -0.16
CDK18-222	ENST00000515494	NUTM2F	A1L443	756 aa		14.05	□□□□□ -0.16
CDK18-222	ENST00000515494	TMEM2	Q9UHN6	1383 aa		14.05	□□□□□ -0.16
CDK18-222	ENST00000515494	PLEKHH1	Q9ULM0	1364 aa		14.05	□□□□□ -0.16
CDK18-222	ENST00000515494	ALK	Q9UM73	1620 aa		14.05	□□□□□ -0.16
CDK18-222	ENST00000515494	ZFYVE9	O95405	1425 aa		14.05	□□□□□ -0.16
CDK18-222	ENST00000515494	ADAMTS8	Q9UP79	889 aa		14.04	□□□□□ -0.16
CDK18-222	ENST00000515494	C3	P01024	1663 aa		14.04	□□□□□ -0.16
CDK18-222	ENST00000515494	HDGF	P51858	240 aa	Known RBP	14.04	□□□□□ -0.16
CDK18-222	ENST00000515494	EID1	Q9Y6B2	187 aa		14.04	□□□□□ -0.16
CDK18-222	ENST00000515494	NUDC	Q9Y266	331 aa		14.03	□□□□□ -0.16
CDK18-222	ENST00000515494	SBNO2	Q9Y2G9	1366 aa		14.03	□□□□□ -0.16
CDK18-222	ENST00000515494	EVC2	Q86UK5	1308 aa		14.03	□□□□□ -0.16
CDK18-222	ENST00000515494	SLC24A1	O60721	1099 aa		14.03	□□□□□ -0.16
CDK18-222	ENST00000515494	PTPRM	P28827	1452 aa		14.03	□□□□□ -0.16
CDK18-222	ENST00000515494	QRICH2	Q9H0J4	1663 aa		14.02	□□□□□ -0.17
CDK18-222	ENST00000515494	RIMS1	Q86UR5	1692 aa	Known RBP	14.01	□□□□□ -0.17
CDK18-222	ENST00000515494	CDCA7L	Q96GN5	454 aa		14.01	□□□□□ -0.17
CDK18-222	ENST00000515494	RTN4	Q9NQC3	1192 aa	Known RBP	14.01	□□□□□ -0.17
CDK18-222	ENST00000515494	MYO3A	Q8NEV4	1616 aa		14.01	□□□□□ -0.17
CDK18-222	ENST00000515494	THEMIS	Q8N1K5	641 aa	Predicted RBP	14.01	□□□□□ -0.17
CDK18-222	ENST00000515494	CDK19	Q9BWU1	502 aa		14.01	□□□□□ -0.17
CDK18-222	ENST00000515494	SMG6	Q86US8	1419 aa	Known RBP	14	□□□□□ -0.17
CDK18-222	ENST00000515494	NCKAP5L	Q9HCH0	1330 aa		14	□□□□□ -0.17
CDK18-222	ENST00000515494	RBM33	Q96EV2	1170 aa	Known RBP	14	□□□□□ -0.17
CDK18-222	ENST00000515494	NSD3	Q9BZ95	1437 aa		13.99	□□□□□ -0.17
CDK18-222	ENST00000515494	WDR43	Q15061	677 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
CDK18-222	ENST00000515494	UBE2Q2	Q8WVN8	375 aa		13.99	□□□□□ -0.17
CDK18-222	ENST00000515494	UBR1	Q8IWV7	1749 aa		13.98	□□□□□ -0.17
CDK18-222	ENST00000515494	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.98	□□□□□ -0.17
CDK18-222	ENST00000515494	CCDC146	Q8IYE0	955 aa		13.98	□□□□□ -0.17
CDK18-222	ENST00000515494	TULP4	Q9NRJ4	1543 aa		13.97	□□□□□ -0.17
CDK18-222	ENST00000515494	CABP1	Q9NZU7	370 aa		13.97	□□□□□ -0.17
CDK18-222	ENST00000515494	NLRP1	Q9C000	1473 aa		13.96	□□□□□ -0.17
CDK18-222	ENST00000515494	NBR1	Q14596	966 aa		13.96	□□□□□ -0.17
CDK18-222	ENST00000515494	MORC1	Q86VD1	984 aa		13.96	□□□□□ -0.17
CDK18-222	ENST00000515494	NPC1L1	Q9UHC9	1359 aa		13.95	□□□□□ -0.18
CDK18-222	ENST00000515494	AMOTL2	Q9Y2J4	779 aa		13.95	□□□□□ -0.18
CDK18-222	ENST00000515494	B4GALNT3	Q6L9W6	998 aa		13.94	□□□□□ -0.18
CDK18-222	ENST00000515494	NRXN3	Q9Y4C0	1643 aa		13.94	□□□□□ -0.18
CDK18-222	ENST00000515494	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
CDK18-222	ENST00000515494	ADAMTS13	Q76LX8	1427 aa		13.94	□□□□□ -0.18
CDK18-222	ENST00000515494	ROBO2	Q9HCK4	1378 aa		13.93	□□□□□ -0.18
CDK18-222	ENST00000515494	GGNBP2	Q9H3C7	697 aa		13.93	□□□□□ -0.18
CDK18-222	ENST00000515494	BLM	P54132	1417 aa	Predicted RBP	13.93	□□□□□ -0.18
CDK18-222	ENST00000515494	EIF5B	O60841	1220 aa	Known RBP	13.93	□□□□□ -0.18
CDK18-222	ENST00000515494	ABCC11	Q96J66	1382 aa		13.92	□□□□□ -0.18
CDK18-222	ENST00000515494	PLEKHG1	Q9ULL1	1385 aa		13.91	□□□□□ -0.18
CDK18-222	ENST00000515494	CGNL1	Q0VF96	1302 aa		13.91	□□□□□ -0.18
CDK18-222	ENST00000515494	FBLN1	P23142	703 aa		13.91	□□□□□ -0.18
CDK18-222	ENST00000515494	WASL	O00401	505 aa	Predicted RBP	13.91	□□□□□ -0.18
CDK18-222	ENST00000515494	ANKLE2	Q86XL3	938 aa		13.9	□□□□□ -0.18
CDK18-222	ENST00000515494	PPP4R2	Q9NY27	417 aa		13.9	□□□□□ -0.18
CDK18-222	ENST00000515494		A0A1W2PP64	1363 aa		13.9	□□□□□ -0.18
CDK18-222	ENST00000515494	APAF1	O14727	1248 aa		13.9	□□□□□ -0.18
CDK18-222	ENST00000515494	ERICH6B	Q5W0A0	696 aa		13.9	□□□□□ -0.19
CDK18-222	ENST00000515494	PTPRU	Q92729	1446 aa		13.9	□□□□□ -0.19
CDK18-222	ENST00000515494	KCNA6	P17658	529 aa		13.89	□□□□□ -0.19
CDK18-222	ENST00000515494	MTHFS	P49914	203 aa		13.89	□□□□□ -0.19
CDK18-222	ENST00000515494	RCAN3	Q9UKA8	241 aa		13.89	□□□□□ -0.19
CDK18-222	ENST00000515494	ANKRD36B	Q8N2N9	1353 aa		13.89	□□□□□ -0.19
CDK18-222	ENST00000515494	NUDT16	Q96DE0	195 aa	Known RBP	13.89	□□□□□ -0.19
CDK18-222	ENST00000515494	HSPA2	P54652	639 aa		13.88	□□□□□ -0.19
CDK18-222	ENST00000515494	SETD1A	O15047	1707 aa	Known RBP	13.88	□□□□□ -0.19
CDK18-222	ENST00000515494	TERF2IP	Q9NYB0	399 aa		13.88	□□□□□ -0.19
CDK18-222	ENST00000515494	PDE3B	Q13370	1112 aa		13.87	□□□□□ -0.19
CDK18-222	ENST00000515494	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.87	□□□□□ -0.19
CDK18-222	ENST00000515494	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.87	□□□□□ -0.19
CDK18-222	ENST00000515494	RNF123	Q5XPI4	1314 aa		13.87	□□□□□ -0.19
CDK18-222	ENST00000515494	TBX22	Q9Y458	520 aa		13.87	□□□□□ -0.19
CDK18-222	ENST00000515494	ADAMTSL3	P82987	1691 aa		13.87	□□□□□ -0.19
CDK18-222	ENST00000515494	PLIN1	O60240	522 aa		13.86	□□□□□ -0.19
CDK18-222	ENST00000515494	ZRANB1	Q9UGI0	708 aa		13.86	□□□□□ -0.19
CDK18-222	ENST00000515494	ATAD2	Q6PL18	1390 aa		13.86	□□□□□ -0.19
CDK18-222	ENST00000515494	PMFBP1	Q8TBY8	1022 aa		13.86	□□□□□ -0.19
CDK18-222	ENST00000515494	PUS7	Q96PZ0	661 aa	Known RBP	13.86	□□□□□ -0.19
CDK18-222	ENST00000515494	NEUROD2	Q15784	382 aa		13.86	□□□□□ -0.19
CDK18-222	ENST00000515494	PRR36	Q9H6K5	1346 aa		13.85	□□□□□ -0.19
CDK18-222	ENST00000515494	PPM1G	O15355	546 aa	Predicted RBP	13.85	□□□□□ -0.19
CDK18-222	ENST00000515494	ARHGAP23	Q9P227	1491 aa		13.85	□□□□□ -0.19
CDK18-222	ENST00000515494	IL27	Q8NEV9	243 aa		13.85	□□□□□ -0.19
CDK18-222	ENST00000515494	RRP1	P56182	461 aa	Known RBP	13.84	□□□□□ -0.19
CDK18-222	ENST00000515494	RRP7A	Q9Y3A4	280 aa	Known RBP	13.84	□□□□□ -0.19
CDK18-222	ENST00000515494	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK18-222	ENST00000515494	SLIT1	O75093	1534 aa		13.84	□□□□□ -0.19
CDK18-222	ENST00000515494	FANCI	Q9NVI1	1328 aa		13.84	□□□□□ -0.19
CDK18-222	ENST00000515494	FYB1	O15117	783 aa		13.84	□□□□□ -0.19
CDK18-222	ENST00000515494	SOX12	O15370	315 aa		13.84	□□□□□ -0.19
CDK18-222	ENST00000515494	INSR	P06213	1382 aa		13.84	□□□□□ -0.19
CDK18-222	ENST00000515494	PLEKHG5	O94827	1062 aa		13.83	□□□□□ -0.19
CDK18-222	ENST00000515494	DMRT2	Q9Y5R5	561 aa		13.83	□□□□□ -0.19
CDK18-222	ENST00000515494	C14orf37	Q86TY3	774 aa		13.83	□□□□□ -0.2
CDK18-222	ENST00000515494	PPIP5K1	Q6PFW1	1433 aa		13.83	□□□□□ -0.2
CDK18-222	ENST00000515494	CCDC61	Q9Y6R9	512 aa		13.83	□□□□□ -0.2
CDK18-222	ENST00000515494	POLR3A	O14802	1390 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK18-222	ENST00000515494	NME9	Q86XW9	330 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms