RNA–Protein interactions for RNA: ENST00000515266.1

MBD4-210, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-210ENST00000515266 PPP1R18Q6NYC8 613 aa8.31□□□□□ -1.08
MBD4-210ENST00000515266 RIC3Q7Z5B4 369 aa8.31□□□□□ -1.08
MBD4-210ENST00000515266 LIMD1Q9UGP4 676 aa8.31□□□□□ -1.08
MBD4-210ENST00000515266 MSS51Q4VC12 460 aa8.3□□□□□ -1.08
MBD4-210ENST00000515266 SH3D19Q5HYK7 790 aa8.3□□□□□ -1.08
MBD4-210ENST00000515266 SYMPKQ92797 1274 aaKnown RBP8.3□□□□□ -1.08
MBD4-210ENST00000515266 SLC6A16Q9GZN6 736 aa8.3□□□□□ -1.08
MBD4-210ENST00000515266 RSPH6AQ9H0K4 717 aa8.3□□□□□ -1.08
MBD4-210ENST00000515266 PRDM9Q9NQV7 894 aa8.3□□□□□ -1.08
MBD4-210ENST00000515266 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.3□□□□□ -1.08
MBD4-210ENST00000515266 PCDHB15Q9Y5E8 787 aa8.3□□□□□ -1.08
MBD4-210ENST00000515266 CLK2P49760 499 aaKnown RBP8.29□□□□□ -1.08
MBD4-210ENST00000515266 USB1Q9BQ65 265 aaKnown RBP8.29□□□□□ -1.08
MBD4-210ENST00000515266 TUSC1Q2TAM9 212 aa8.28□□□□□ -1.08
MBD4-210ENST00000515266 IL27Q8NEV9 243 aa8.28□□□□□ -1.08
MBD4-210ENST00000515266 POLR3EQ9NVU0 708 aa8.28□□□□□ -1.08
MBD4-210ENST00000515266 RNF223E7ERA6 249 aa8.27□□□□□ -1.09
MBD4-210ENST00000515266 C6orf229H3BNL8 230 aa8.27□□□□□ -1.09
MBD4-210ENST00000515266 GGCXP38435 758 aa8.27□□□□□ -1.09
MBD4-210ENST00000515266 RETREG3Q86VR2 466 aa8.27□□□□□ -1.09
MBD4-210ENST00000515266 PPEF1O14829 653 aaPredicted RBP8.26□□□□□ -1.09
MBD4-210ENST00000515266 MTMR2Q13614 643 aa8.26□□□□□ -1.09
MBD4-210ENST00000515266 SKIV2LQ15477 1246 aaKnown RBP8.26□□□□□ -1.09
MBD4-210ENST00000515266 CSPP1Q1MSJ5 1256 aa8.26□□□□□ -1.09
MBD4-210ENST00000515266 CABLES1Q8TDN4 633 aa8.26□□□□□ -1.09
MBD4-210ENST00000515266 DXOO77932 396 aaKnown RBP8.25□□□□□ -1.09
MBD4-210ENST00000515266 HRCP23327 699 aa8.25□□□□□ -1.09
MBD4-210ENST00000515266 MMP16P51512 607 aa8.25□□□□□ -1.09
MBD4-210ENST00000515266 QPCTQ16769 361 aa8.25□□□□□ -1.09
MBD4-210ENST00000515266 PRPF38BQ5VTL8 546 aaKnown RBP8.25□□□□□ -1.09
MBD4-210ENST00000515266 LILRB3O75022 631 aa8.24□□□□□ -1.09
MBD4-210ENST00000515266 ANKLE1Q8NAG6 615 aa8.24□□□□□ -1.09
MBD4-210ENST00000515266 PROCA1Q8NCQ7 364 aaPredicted RBP8.24□□□□□ -1.09
MBD4-210ENST00000515266 ZBTB3Q9H5J0 574 aa8.24□□□□□ -1.09
MBD4-210ENST00000515266 SPDYE5A6NIY4 337 aa8.23□□□□□ -1.09
MBD4-210ENST00000515266 JUNDP17535 347 aa8.23□□□□□ -1.09
MBD4-210ENST00000515266 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.23□□□□□ -1.09
MBD4-210ENST00000515266 GOPCQ9HD26 462 aa8.23□□□□□ -1.09
MBD4-210ENST00000515266 CFAP99D6REC4 459 aa8.22□□□□□ -1.09
MBD4-210ENST00000515266 RGS20O76081 388 aa8.22□□□□□ -1.09
MBD4-210ENST00000515266 PLA2G2CQ5R387 149 aa8.22□□□□□ -1.09
MBD4-210ENST00000515266 FBXO31Q5XUX0 539 aaPredicted RBP8.22□□□□□ -1.09
MBD4-210ENST00000515266 PRR7Q8TB68 274 aa8.22□□□□□ -1.09
MBD4-210ENST00000515266 FCF1Q9Y324 198 aaKnown RBP8.22□□□□□ -1.09
MBD4-210ENST00000515266 RTL5Q5HYW3 569 aaPredicted RBP8.21□□□□□ -1.1
MBD4-210ENST00000515266 EMID1Q96A84 441 aaPredicted RBP8.21□□□□□ -1.1
MBD4-210ENST00000515266 DESI1Q6ICB0 168 aa8.19□□□□□ -1.1
MBD4-210ENST00000515266 PRKD2Q9BZL6 878 aa8.19□□□□□ -1.1
MBD4-210ENST00000515266 NUTM2BA6NNL0 878 aaPredicted RBP8.18□□□□□ -1.1
MBD4-210ENST00000515266 NUTM2EB1AL46 878 aaPredicted RBP8.18□□□□□ -1.1
MBD4-210ENST00000515266 NUTM2DQ5VT03 806 aaPredicted RBP8.18□□□□□ -1.1
MBD4-210ENST00000515266 PPP2R2DQ66LE6 453 aa8.18□□□□□ -1.1
MBD4-210ENST00000515266 NUTM2AQ8IVF1 878 aaPredicted RBP8.18□□□□□ -1.1
MBD4-210ENST00000515266 PCMTD1Q96MG8 357 aaPredicted RBP8.18□□□□□ -1.1
MBD4-210ENST00000515266 LIAT1Q6ZQX7 453 aa8.17□□□□□ -1.1
MBD4-210ENST00000515266 V9GY48 417 aaPredicted RBP8.17□□□□□ -1.1
MBD4-210ENST00000515266 PTPRNQ16849 979 aa8.16□□□□□ -1.1
MBD4-210ENST00000515266 SLC19A1P41440 591 aa8.15□□□□□ -1.1
MBD4-210ENST00000515266 LYPD8Q6UX82 237 aa8.15□□□□□ -1.1
MBD4-210ENST00000515266 NUDT12Q9BQG2 462 aa8.15□□□□□ -1.1
MBD4-210ENST00000515266 PER1O15534 1290 aaPredicted RBP8.14□□□□□ -1.11
MBD4-210ENST00000515266 CCNYL3P0C7X3 344 aa8.14□□□□□ -1.11
MBD4-210ENST00000515266 ATP1B4Q9UN42 357 aaPredicted RBP8.14□□□□□ -1.11
MBD4-210ENST00000515266 RPIAP49247 311 aa8.13□□□□□ -1.11
MBD4-210ENST00000515266 SPRYD7Q5W111 196 aa8.13□□□□□ -1.11
MBD4-210ENST00000515266 CCDC24Q8N4L8 307 aa8.13□□□□□ -1.11
MBD4-210ENST00000515266 HELBQ8NG08 1087 aaPredicted RBP8.13□□□□□ -1.11
MBD4-210ENST00000515266 RFC5P40937 340 aa8.12□□□□□ -1.11
MBD4-210ENST00000515266 PTCRAQ6ISU1 281 aaPredicted RBP8.12□□□□□ -1.11
MBD4-210ENST00000515266 TSC1Q92574 1164 aa8.12□□□□□ -1.11
MBD4-210ENST00000515266 EVA1BQ9NVM1 165 aa8.12□□□□□ -1.11
MBD4-210ENST00000515266 F12P00748 615 aaPredicted RBP8.11□□□□□ -1.11
MBD4-210ENST00000515266 CTDSPL2Q05D32 466 aa8.1□□□□□ -1.11
MBD4-210ENST00000515266 KCNH2Q12809 1159 aa8.1□□□□□ -1.11
MBD4-210ENST00000515266 TRIM32Q13049 653 aa8.1□□□□□ -1.11
MBD4-210ENST00000515266 AP1G2O75843 785 aa8.09□□□□□ -1.11
MBD4-210ENST00000515266 ZNF598Q86UK7 904 aaKnown RBP8.09□□□□□ -1.11
MBD4-210ENST00000515266 MAP10Q9P2G4 905 aa8.09□□□□□ -1.11
MBD4-210ENST00000515266 ZBTB24O43167 697 aaPredicted RBP8.08□□□□□ -1.12
MBD4-210ENST00000515266 ZNF697Q5TEC3 545 aa8.08□□□□□ -1.12
MBD4-210ENST00000515266 LRRN4Q8WUT4 740 aa8.08□□□□□ -1.12
MBD4-210ENST00000515266 UNC93B1Q9H1C4 597 aa8.08□□□□□ -1.12
MBD4-210ENST00000515266 USP17L8P0C7I0 530 aa8.07□□□□□ -1.12
MBD4-210ENST00000515266 CTHP32929 405 aa8.07□□□□□ -1.12
MBD4-210ENST00000515266 TRIM67Q6ZTA4 783 aa8.07□□□□□ -1.12
MBD4-210ENST00000515266 CD2BP2O95400 341 aaKnown RBP8.06□□□□□ -1.12
MBD4-210ENST00000515266 TMEM259Q4ZIN3 620 aa8.06□□□□□ -1.12
MBD4-210ENST00000515266 SKOR1P84550 965 aa8.04□□□□□ -1.12
MBD4-210ENST00000515266 TMEM132AQ24JP5 1023 aa8.04□□□□□ -1.12
MBD4-210ENST00000515266 HMX1Q9NP08 348 aaPredicted RBP8.04□□□□□ -1.12
MBD4-210ENST00000515266 PKD2L1Q9P0L9 805 aa8.04□□□□□ -1.12
MBD4-210ENST00000515266 GDF9O60383 454 aa8.03□□□□□ -1.12
MBD4-210ENST00000515266 WNT7BP56706 349 aa8.03□□□□□ -1.12
MBD4-210ENST00000515266 SH3BP2P78314 561 aa8.02□□□□□ -1.13
MBD4-210ENST00000515266 LINC01559Q495D7 138 aa8.02□□□□□ -1.13
MBD4-210ENST00000515266 BAP1Q92560 729 aa8.02□□□□□ -1.13
MBD4-210ENST00000515266 IRX2Q9BZI1 471 aaPredicted RBP8.02□□□□□ -1.13
MBD4-210ENST00000515266 PRR20EP86478 221 aa8.01□□□□□ -1.13
MBD4-210ENST00000515266 PRR20CP86479 221 aa8.01□□□□□ -1.13
MBD4-210ENST00000515266 PRR20DP86480 221 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms