RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 FAM50AQ14320 339 aaKnown RBP13.09□□□□□ -0.31
TRIM6-211ENST00000515022 ANKRD50Q9ULJ7 1429 aa13.09□□□□□ -0.31
TRIM6-211ENST00000515022 XRN1Q8IZH2 1706 aaKnown RBP13.08□□□□□ -0.32
TRIM6-211ENST00000515022 DCCP43146 1447 aa13.07□□□□□ -0.32
TRIM6-211ENST00000515022 NRXN3Q9Y4C0 1643 aa13.07□□□□□ -0.32
TRIM6-211ENST00000515022 METP08581 1390 aa13.07□□□□□ -0.32
TRIM6-211ENST00000515022 ADGRL2O95490 1459 aa13.06□□□□□ -0.32
TRIM6-211ENST00000515022 TRPC5Q9UL62 973 aaPredicted RBP13.06□□□□□ -0.32
TRIM6-211ENST00000515022 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
TRIM6-211ENST00000515022 POLA2Q14181 598 aa13.05□□□□□ -0.32
TRIM6-211ENST00000515022 ORAI2Q96SN7 254 aa13.04□□□□□ -0.32
TRIM6-211ENST00000515022 ATRNO75882 1429 aa13.04□□□□□ -0.32
TRIM6-211ENST00000515022 ADGRL3Q9HAR2 1447 aa13.04□□□□□ -0.32
TRIM6-211ENST00000515022 ZNF326Q5BKZ1 582 aaKnown RBP13.03□□□□□ -0.32
TRIM6-211ENST00000515022 C1orf167Q5SNV9 1468 aa13.03□□□□□ -0.32
TRIM6-211ENST00000515022 FNBP4Q8N3X1 1017 aaPredicted RBP13.02□□□□□ -0.33
TRIM6-211ENST00000515022 DEFB132Q7Z7B7 95 aa13□□□□□ -0.33
TRIM6-211ENST00000515022 SOS2Q07890 1332 aaPredicted RBP12.99□□□□□ -0.33
TRIM6-211ENST00000515022 XPCQ01831 940 aaPredicted RBP12.99□□□□□ -0.33
TRIM6-211ENST00000515022 BCL9LQ86UU0 1499 aa12.98□□□□□ -0.33
TRIM6-211ENST00000515022 PTCH1Q13635 1447 aa12.98□□□□□ -0.33
TRIM6-211ENST00000515022 NUP155O75694 1391 aa12.98□□□□□ -0.33
TRIM6-211ENST00000515022 IQGAP3Q86VI3 1631 aa12.98□□□□□ -0.33
TRIM6-211ENST00000515022 CCDC125Q86Z20 511 aa12.97□□□□□ -0.33
TRIM6-211ENST00000515022 BRWD3Q6RI45 1802 aa12.97□□□□□ -0.33
TRIM6-211ENST00000515022 ROBO2Q9HCK4 1378 aa12.96□□□□□ -0.33
TRIM6-211ENST00000515022 LAMC1P11047 1609 aa12.96□□□□□ -0.33
TRIM6-211ENST00000515022 GJD4Q96KN9 370 aaPredicted RBP12.96□□□□□ -0.33
TRIM6-211ENST00000515022 PSDA5PKW4 1024 aaPredicted RBP12.95□□□□□ -0.34
TRIM6-211ENST00000515022 MARF1Q9Y4F3 1742 aaKnown RBP12.94□□□□□ -0.34
TRIM6-211ENST00000515022 MYOM2P54296 1465 aa12.94□□□□□ -0.34
TRIM6-211ENST00000515022 ITGAEP38570 1179 aa12.94□□□□□ -0.34
TRIM6-211ENST00000515022 COL22A1Q8NFW1 1626 aaPredicted RBP12.94□□□□□ -0.34
TRIM6-211ENST00000515022 SPHKAPQ2M3C7 1700 aa12.93□□□□□ -0.34
TRIM6-211ENST00000515022 PLEKHG5O94827 1062 aa12.93□□□□□ -0.34
TRIM6-211ENST00000515022 ESCO1Q5FWF5 840 aa12.93□□□□□ -0.34
TRIM6-211ENST00000515022 BLMP54132 1417 aaPredicted RBP12.93□□□□□ -0.34
TRIM6-211ENST00000515022 GLI3P10071 1580 aa12.93□□□□□ -0.34
TRIM6-211ENST00000515022 NEXMIFQ5QGS0 1516 aa12.93□□□□□ -0.34
TRIM6-211ENST00000515022 RALGAPBQ86X10 1494 aa12.92□□□□□ -0.34
TRIM6-211ENST00000515022 NUTM2FA1L443 756 aa12.92□□□□□ -0.34
TRIM6-211ENST00000515022 ZBTB12Q9Y330 459 aaPredicted RBP12.92□□□□□ -0.34
TRIM6-211ENST00000515022 FOXO3O43524 673 aa12.91□□□□□ -0.34
TRIM6-211ENST00000515022 CLTCL1P53675 1640 aa12.91□□□□□ -0.34
TRIM6-211ENST00000515022 UNC5CLQ8IV45 518 aa12.9□□□□□ -0.34
TRIM6-211ENST00000515022 PXDNQ92626 1479 aa12.9□□□□□ -0.34
TRIM6-211ENST00000515022 LRP5O75197 1615 aa12.89□□□□□ -0.35
TRIM6-211ENST00000515022 SF3B2Q13435 895 aaKnown RBP12.89□□□□□ -0.35
TRIM6-211ENST00000515022 SEPT12Q8IYM1 358 aa12.89□□□□□ -0.35
TRIM6-211ENST00000515022 NPHP3Q7Z494 1330 aa12.88□□□□□ -0.35
TRIM6-211ENST00000515022 HRCP23327 699 aa12.87□□□□□ -0.35
TRIM6-211ENST00000515022 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.87□□□□□ -0.35
TRIM6-211ENST00000515022 KIF1BO60333 1816 aa12.86□□□□□ -0.35
TRIM6-211ENST00000515022 ROCK1Q13464 1354 aa12.86□□□□□ -0.35
TRIM6-211ENST00000515022 CCDC9Q9Y3X0 531 aaKnown RBP12.86□□□□□ -0.35
TRIM6-211ENST00000515022 SLIT2O94813 1529 aa12.86□□□□□ -0.35
TRIM6-211ENST00000515022 CABLES1Q8TDN4 633 aa12.85□□□□□ -0.35
TRIM6-211ENST00000515022 STK26Q9P289 416 aa12.84□□□□□ -0.35
TRIM6-211ENST00000515022 HFM1A2PYH4 1435 aa12.83□□□□□ -0.36
TRIM6-211ENST00000515022 A0A0G2JS52 829 aa12.83□□□□□ -0.36
TRIM6-211ENST00000515022 MYT1Q01538 1121 aa12.83□□□□□ -0.36
TRIM6-211ENST00000515022 KRT27Q7Z3Y8 459 aa12.83□□□□□ -0.36
TRIM6-211ENST00000515022 WAPLQ7Z5K2 1190 aa12.83□□□□□ -0.36
TRIM6-211ENST00000515022 NAIPQ13075 1403 aa12.82□□□□□ -0.36
TRIM6-211ENST00000515022 USP32Q8NFA0 1604 aa12.82□□□□□ -0.36
TRIM6-211ENST00000515022 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
TRIM6-211ENST00000515022 EN1Q05925 392 aaPredicted RBP12.82□□□□□ -0.36
TRIM6-211ENST00000515022 R3HDM1Q15032 1099 aaKnown RBP12.82□□□□□ -0.36
TRIM6-211ENST00000515022 FAM182BQ5T319 152 aa12.82□□□□□ -0.36
TRIM6-211ENST00000515022 SPATA31A3Q5VYP0 1347 aa12.82□□□□□ -0.36
TRIM6-211ENST00000515022 CDC42BPGQ6DT37 1551 aa12.81□□□□□ -0.36
TRIM6-211ENST00000515022 VGFO15240 615 aaPredicted RBP12.81□□□□□ -0.36
TRIM6-211ENST00000515022 VPS72Q15906 364 aa12.81□□□□□ -0.36
TRIM6-211ENST00000515022 PPARGC1BQ86YN6 1023 aaKnown RBP12.81□□□□□ -0.36
TRIM6-211ENST00000515022 PLCH1Q4KWH8 1693 aa12.8□□□□□ -0.36
TRIM6-211ENST00000515022 BAG6P46379 1132 aa12.8□□□□□ -0.36
TRIM6-211ENST00000515022 KRT28Q7Z3Y7 464 aa12.8□□□□□ -0.36
TRIM6-211ENST00000515022 PLEKHH1Q9ULM0 1364 aa12.8□□□□□ -0.36
TRIM6-211ENST00000515022 LMOD2Q6P5Q4 547 aa12.79□□□□□ -0.36
TRIM6-211ENST00000515022 LRPPRCP42704 1394 aaKnown RBP12.79□□□□□ -0.36
TRIM6-211ENST00000515022 RGPD8O14715 1765 aaPredicted RBP12.79□□□□□ -0.36
TRIM6-211ENST00000515022 FAM98CQ17RN3 349 aaKnown RBP12.78□□□□□ -0.36
TRIM6-211ENST00000515022 PPLO60437 1756 aa12.78□□□□□ -0.36
TRIM6-211ENST00000515022 PRAG1Q86YV5 1406 aa12.78□□□□□ -0.36
TRIM6-211ENST00000515022 ONECUT3O60422 494 aaPredicted RBP12.77□□□□□ -0.37
TRIM6-211ENST00000515022 TMEM132EQ6IEE7 984 aa12.77□□□□□ -0.37
TRIM6-211ENST00000515022 FAM83GA6ND36 823 aa12.76□□□□□ -0.37
TRIM6-211ENST00000515022 FMN2Q9NZ56 1722 aa12.76□□□□□ -0.37
TRIM6-211ENST00000515022 YY1P25490 414 aa12.75□□□□□ -0.37
TRIM6-211ENST00000515022 ADGRF5Q8IZF2 1346 aa12.75□□□□□ -0.37
TRIM6-211ENST00000515022 NWD2Q9ULI1 1742 aa12.75□□□□□ -0.37
TRIM6-211ENST00000515022 ABCA3Q99758 1704 aa12.74□□□□□ -0.37
TRIM6-211ENST00000515022 CCDC144AA2RUR9 1427 aa12.74□□□□□ -0.37
TRIM6-211ENST00000515022 EZH2Q15910 746 aaKnown RBP12.74□□□□□ -0.37
TRIM6-211ENST00000515022 TNS3Q68CZ2 1445 aa12.73□□□□□ -0.37
TRIM6-211ENST00000515022 RPGRIP1LQ68CZ1 1315 aa12.73□□□□□ -0.37
TRIM6-211ENST00000515022 MKRN4PQ13434 485 aaPredicted RBP12.73□□□□□ -0.37
TRIM6-211ENST00000515022 PHF8Q9UPP1 1060 aa12.73□□□□□ -0.37
TRIM6-211ENST00000515022 RGPD1P0DJD0 1748 aa12.73□□□□□ -0.37
TRIM6-211ENST00000515022 KIF1AQ12756 1690 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms