RNA–Protein interactions for RNA: ENST00000514627.5

YIPF3-217, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-217ENST00000514627 SIRT1Q96EB6 747 aa18.54■□□□□ 0.56
YIPF3-217ENST00000514627 STK26Q9P289 416 aa18.54■□□□□ 0.56
YIPF3-217ENST00000514627 PIK3C2GO75747 1445 aa18.53■□□□□ 0.56
YIPF3-217ENST00000514627 ESCO1Q5FWF5 840 aa18.53■□□□□ 0.56
YIPF3-217ENST00000514627 NPHP3Q7Z494 1330 aa18.52■□□□□ 0.56
YIPF3-217ENST00000514627 TMEM132EQ6IEE7 984 aa18.52■□□□□ 0.56
YIPF3-217ENST00000514627 WAPLQ7Z5K2 1190 aa18.52■□□□□ 0.56
YIPF3-217ENST00000514627 C8orf37Q96NL8 207 aa18.52■□□□□ 0.56
YIPF3-217ENST00000514627 C14orf93Q9H972 538 aaKnown RBP18.52■□□□□ 0.56
YIPF3-217ENST00000514627 CDK12Q9NYV4 1490 aaPredicted RBP18.52■□□□□ 0.55
YIPF3-217ENST00000514627 CDC42BPGQ6DT37 1551 aa18.51■□□□□ 0.55
YIPF3-217ENST00000514627 NGLY1Q96IV0 654 aa18.5■□□□□ 0.55
YIPF3-217ENST00000514627 QTRT2Q9H974 415 aaKnown RBP18.5■□□□□ 0.55
YIPF3-217ENST00000514627 ADAMTS2O95450 1211 aa18.49■□□□□ 0.55
YIPF3-217ENST00000514627 RBM6P78332 1123 aaKnown RBP18.49■□□□□ 0.55
YIPF3-217ENST00000514627 YTHDC2Q9H6S0 1430 aaKnown RBP18.49■□□□□ 0.55
YIPF3-217ENST00000514627 DHX57Q6P158 1386 aaKnown RBP18.47■□□□□ 0.55
YIPF3-217ENST00000514627 RAB3GAP2Q9H2M9 1393 aa18.47■□□□□ 0.55
YIPF3-217ENST00000514627 IFT172Q9UG01 1749 aa18.47■□□□□ 0.55
YIPF3-217ENST00000514627 FOXO3O43524 673 aa18.47■□□□□ 0.55
YIPF3-217ENST00000514627 UPF1Q92900 1129 aaKnown RBP eCLIP18.47■□□□□ 0.55
YIPF3-217ENST00000514627 NRXN1Q9ULB1 1477 aa18.46■□□□□ 0.54
YIPF3-217ENST00000514627 HRCP23327 699 aa18.45■□□□□ 0.54
YIPF3-217ENST00000514627 FNBP4Q8N3X1 1017 aaPredicted RBP18.45■□□□□ 0.54
YIPF3-217ENST00000514627 MYOM2P54296 1465 aa18.45■□□□□ 0.54
YIPF3-217ENST00000514627 PLEKHH1Q9ULM0 1364 aa18.44■□□□□ 0.54
YIPF3-217ENST00000514627 CFAP70Q5T0N1 1121 aa18.44■□□□□ 0.54
YIPF3-217ENST00000514627 NUTM2FA1L443 756 aa18.43■□□□□ 0.54
YIPF3-217ENST00000514627 USP21Q9UK80 565 aa18.43■□□□□ 0.54
YIPF3-217ENST00000514627 PXDNQ92626 1479 aa18.43■□□□□ 0.54
YIPF3-217ENST00000514627 STAC3Q96MF2 364 aa18.42■□□□□ 0.54
YIPF3-217ENST00000514627 TRPC5Q9UL62 973 aaPredicted RBP18.42■□□□□ 0.54
YIPF3-217ENST00000514627 KNDC1Q76NI1 1749 aa18.42■□□□□ 0.54
YIPF3-217ENST00000514627 XPCQ01831 940 aaPredicted RBP18.4■□□□□ 0.54
YIPF3-217ENST00000514627 COL22A1Q8NFW1 1626 aaPredicted RBP18.4■□□□□ 0.54
YIPF3-217ENST00000514627 KRT28Q7Z3Y7 464 aa18.38■□□□□ 0.53
YIPF3-217ENST00000514627 PRAM1Q96QH2 718 aa18.38■□□□□ 0.53
YIPF3-217ENST00000514627 SPATA31A3Q5VYP0 1347 aa18.38■□□□□ 0.53
YIPF3-217ENST00000514627 RGS12O14924 1447 aa18.38■□□□□ 0.53
YIPF3-217ENST00000514627 PSME1Q06323 249 aa18.37■□□□□ 0.53
YIPF3-217ENST00000514627 POGKQ9P215 609 aa18.37■□□□□ 0.53
YIPF3-217ENST00000514627 PHF8Q9UPP1 1060 aa18.37■□□□□ 0.53
YIPF3-217ENST00000514627 FMN2Q9NZ56 1722 aa18.35■□□□□ 0.53
YIPF3-217ENST00000514627 DLC1Q96QB1 1528 aa18.34■□□□□ 0.53
YIPF3-217ENST00000514627 ATRNO75882 1429 aa18.34■□□□□ 0.53
YIPF3-217ENST00000514627 DCAF11Q8TEB1 546 aa18.34■□□□□ 0.53
YIPF3-217ENST00000514627 KIF1AQ12756 1690 aa18.34■□□□□ 0.53
YIPF3-217ENST00000514627 SAFB2Q14151 953 aaKnown RBP eCLIP18.33■□□□□ 0.52
YIPF3-217ENST00000514627 BCL9LQ86UU0 1499 aa18.33■□□□□ 0.52
YIPF3-217ENST00000514627 KDM2AQ9Y2K7 1162 aa18.32■□□□□ 0.52
YIPF3-217ENST00000514627 ANKARQ7Z5J8 1434 aa18.32■□□□□ 0.52
YIPF3-217ENST00000514627 ATAD2Q6PL18 1390 aa18.31■□□□□ 0.52
YIPF3-217ENST00000514627 TRAK1Q9UPV9 953 aa18.31■□□□□ 0.52
YIPF3-217ENST00000514627 SBNO1A3KN83 1393 aa18.3■□□□□ 0.52
YIPF3-217ENST00000514627 ADGRB1O14514 1584 aa18.3■□□□□ 0.52
YIPF3-217ENST00000514627 GJD4Q96KN9 370 aaPredicted RBP18.3■□□□□ 0.52
YIPF3-217ENST00000514627 EIF3AQ14152 1382 aaKnown RBP18.3■□□□□ 0.52
YIPF3-217ENST00000514627 UNC5CLQ8IV45 518 aa18.29■□□□□ 0.52
YIPF3-217ENST00000514627 TNS3Q68CZ2 1445 aa18.29■□□□□ 0.52
YIPF3-217ENST00000514627 ARHGEF10O15013 1369 aa18.28■□□□□ 0.52
YIPF3-217ENST00000514627 HAP1P54257 671 aaPredicted RBP18.27■□□□□ 0.52
YIPF3-217ENST00000514627 SLIT2O94813 1529 aa18.26■□□□□ 0.51
YIPF3-217ENST00000514627 ADGRB2O60241 1585 aa18.25■□□□□ 0.51
YIPF3-217ENST00000514627 WASLO00401 505 aaPredicted RBP18.25■□□□□ 0.51
YIPF3-217ENST00000514627 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
YIPF3-217ENST00000514627 HIRIP3Q9BW71 556 aaPredicted RBP18.25■□□□□ 0.51
YIPF3-217ENST00000514627 MINK1Q8N4C8 1332 aaPredicted RBP18.24■□□□□ 0.51
YIPF3-217ENST00000514627 LMOD2Q6P5Q4 547 aa18.24■□□□□ 0.51
YIPF3-217ENST00000514627 CCDC125Q86Z20 511 aa18.24■□□□□ 0.51
YIPF3-217ENST00000514627 GPRASP1Q5JY77 1395 aa18.24■□□□□ 0.51
YIPF3-217ENST00000514627 CABLES1Q8TDN4 633 aa18.23■□□□□ 0.51
YIPF3-217ENST00000514627 MARF1Q9Y4F3 1742 aaKnown RBP18.23■□□□□ 0.51
YIPF3-217ENST00000514627 VPS72Q15906 364 aa18.21■□□□□ 0.51
YIPF3-217ENST00000514627 PRR36Q9H6K5 1346 aa18.21■□□□□ 0.51
YIPF3-217ENST00000514627 USP32Q8NFA0 1604 aa18.2■□□□□ 0.5
YIPF3-217ENST00000514627 RALGAPBQ86X10 1494 aa18.2■□□□□ 0.5
YIPF3-217ENST00000514627 RGPD8O14715 1765 aaPredicted RBP18.19■□□□□ 0.5
YIPF3-217ENST00000514627 TULP4Q9NRJ4 1543 aa18.19■□□□□ 0.5
YIPF3-217ENST00000514627 NGDNQ8NEJ9 315 aaKnown RBP18.19■□□□□ 0.5
YIPF3-217ENST00000514627 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.19■□□□□ 0.5
YIPF3-217ENST00000514627 ONECUT3O60422 494 aaPredicted RBP18.18■□□□□ 0.5
YIPF3-217ENST00000514627 FAM83GA6ND36 823 aa18.17■□□□□ 0.5
YIPF3-217ENST00000514627 EP400Q96L91 3159 aa18.17■□□□□ 0.5
YIPF3-217ENST00000514627 PLEKHG5O94827 1062 aa18.16■□□□□ 0.5
YIPF3-217ENST00000514627 NUDT16Q96DE0 195 aaKnown RBP18.16■□□□□ 0.5
YIPF3-217ENST00000514627 GLI3P10071 1580 aa18.15■□□□□ 0.5
YIPF3-217ENST00000514627 SEPT12Q8IYM1 358 aa18.14■□□□□ 0.49
YIPF3-217ENST00000514627 CCDC9Q9Y3X0 531 aaKnown RBP18.14■□□□□ 0.49
YIPF3-217ENST00000514627 PAK3O75914 559 aaPredicted RBP18.13■□□□□ 0.49
YIPF3-217ENST00000514627 CDK19Q9BWU1 502 aa18.13■□□□□ 0.49
YIPF3-217ENST00000514627 BTG4Q9NY30 223 aa18.12■□□□□ 0.49
YIPF3-217ENST00000514627 ZRANB1Q9UGI0 708 aa18.12■□□□□ 0.49
YIPF3-217ENST00000514627 CCDC61Q9Y6R9 512 aa18.12■□□□□ 0.49
YIPF3-217ENST00000514627 NWD2Q9ULI1 1742 aa18.12■□□□□ 0.49
YIPF3-217ENST00000514627 ATP7BP35670 1465 aa18.11■□□□□ 0.49
YIPF3-217ENST00000514627 TRPM3Q9HCF6 1732 aaPredicted RBP18.11■□□□□ 0.49
YIPF3-217ENST00000514627 BLMP54132 1417 aaPredicted RBP18.1■□□□□ 0.49
YIPF3-217ENST00000514627 PLEKHG3A1L390 1219 aa18.1■□□□□ 0.49
YIPF3-217ENST00000514627 SRCAPQ6ZRS2 3230 aa18.1■□□□□ 0.49
YIPF3-217ENST00000514627 NBPF1Q3BBV0 1214 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms