RNA–Protein interactions for RNA: ENST00000514435.1

LRBA-212, Transcript of LPS responsive beige-like anchor protein, humanhuman

TSL 2

Gene LRBA, Length 2,140 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRBA-212ENST00000514435 SCAF1Q9H7N4 1312 aaKnown RBP20.65■□□□□ 0.9
LRBA-212ENST00000514435 SIRT1Q96EB6 747 aa20.65■□□□□ 0.9
LRBA-212ENST00000514435 RALGAPBQ86X10 1494 aa20.64■□□□□ 0.89
LRBA-212ENST00000514435 DCCP43146 1447 aa20.63■□□□□ 0.89
LRBA-212ENST00000514435 GPRASP1Q5JY77 1395 aa20.62■□□□□ 0.89
LRBA-212ENST00000514435 ATF3P18847 181 aa20.62■□□□□ 0.89
LRBA-212ENST00000514435 POGKQ9P215 609 aa20.62■□□□□ 0.89
LRBA-212ENST00000514435 SLAIN2Q9P270 581 aa20.62■□□□□ 0.89
LRBA-212ENST00000514435 MST1RQ04912 1400 aa20.61■□□□□ 0.89
LRBA-212ENST00000514435 CADPS2Q86UW7 1296 aa20.61■□□□□ 0.89
LRBA-212ENST00000514435 TIMELESSQ9UNS1 1208 aa20.61■□□□□ 0.89
LRBA-212ENST00000514435 CDC42BPGQ6DT37 1551 aa20.6■□□□□ 0.89
LRBA-212ENST00000514435 HIRIP3Q9BW71 556 aaPredicted RBP20.6■□□□□ 0.89
LRBA-212ENST00000514435 MINK1Q8N4C8 1332 aaPredicted RBP20.59■□□□□ 0.89
LRBA-212ENST00000514435 ROBO1Q9Y6N7 1651 aa20.59■□□□□ 0.89
LRBA-212ENST00000514435 NUTM2FA1L443 756 aa20.57■□□□□ 0.88
LRBA-212ENST00000514435 CARD11Q9BXL7 1154 aa20.57■□□□□ 0.88
LRBA-212ENST00000514435 ADGRB2O60241 1585 aa20.56■□□□□ 0.88
LRBA-212ENST00000514435 FMN2Q9NZ56 1722 aa20.56■□□□□ 0.88
LRBA-212ENST00000514435 C1orf167Q5SNV9 1468 aa20.55■□□□□ 0.88
LRBA-212ENST00000514435 QRICH2Q9H0J4 1663 aa20.54■□□□□ 0.88
LRBA-212ENST00000514435 HSPA1LP34931 641 aa20.53■□□□□ 0.88
LRBA-212ENST00000514435 BRINP3Q76B58 766 aa20.53■□□□□ 0.88
LRBA-212ENST00000514435 CENPJQ9HC77 1338 aaPredicted RBP20.53■□□□□ 0.88
LRBA-212ENST00000514435 ORAI2Q96SN7 254 aa20.53■□□□□ 0.88
LRBA-212ENST00000514435 USP32Q8NFA0 1604 aa20.52■□□□□ 0.87
LRBA-212ENST00000514435 RGPD8O14715 1765 aaPredicted RBP20.51■□□□□ 0.87
LRBA-212ENST00000514435 DDX17Q92841 729 aaKnown RBP20.5■□□□□ 0.87
LRBA-212ENST00000514435 PRR36Q9H6K5 1346 aa20.48■□□□□ 0.87
LRBA-212ENST00000514435 WASLO00401 505 aaPredicted RBP20.48■□□□□ 0.87
LRBA-212ENST00000514435 TULP4Q9NRJ4 1543 aa20.48■□□□□ 0.87
LRBA-212ENST00000514435 EIF3AQ14152 1382 aaKnown RBP20.46■□□□□ 0.87
LRBA-212ENST00000514435 ESCO1Q5FWF5 840 aa20.45■□□□□ 0.86
LRBA-212ENST00000514435 CDK19Q9BWU1 502 aa20.45■□□□□ 0.86
LRBA-212ENST00000514435 AHDC1Q5TGY3 1603 aaPredicted RBP20.44■□□□□ 0.86
LRBA-212ENST00000514435 USP47Q96K76 1375 aa20.44■□□□□ 0.86
LRBA-212ENST00000514435 PHLPP1O60346 1717 aa20.44■□□□□ 0.86
LRBA-212ENST00000514435 ATP7BP35670 1465 aa20.44■□□□□ 0.86
LRBA-212ENST00000514435 NHSL1Q5SYE7 1610 aa20.44■□□□□ 0.86
LRBA-212ENST00000514435 ST20-MTHFSA0A0A6YYL1 179 aa20.43■□□□□ 0.86
LRBA-212ENST00000514435 COL16A1Q07092 1604 aaPredicted RBP20.43■□□□□ 0.86
LRBA-212ENST00000514435 ANKARQ7Z5J8 1434 aa20.42■□□□□ 0.86
LRBA-212ENST00000514435 CABP2Q9NPB3 220 aa20.41■□□□□ 0.86
LRBA-212ENST00000514435 TESK2Q96S53 571 aa20.41■□□□□ 0.86
LRBA-212ENST00000514435 FOXO3O43524 673 aa20.39■□□□□ 0.86
LRBA-212ENST00000514435 XPCQ01831 940 aaPredicted RBP20.39■□□□□ 0.86
LRBA-212ENST00000514435 NUDT16Q96DE0 195 aaKnown RBP20.39■□□□□ 0.86
LRBA-212ENST00000514435 SBNO2Q9Y2G9 1366 aa20.39■□□□□ 0.85
LRBA-212ENST00000514435 PMFBP1Q8TBY8 1022 aa20.39■□□□□ 0.85
LRBA-212ENST00000514435 TOPAZ1Q8N9V7 1692 aa20.38■□□□□ 0.85
LRBA-212ENST00000514435 SRPK2P78362 688 aaKnown RBP20.38■□□□□ 0.85
LRBA-212ENST00000514435 PHF8Q9UPP1 1060 aa20.38■□□□□ 0.85
LRBA-212ENST00000514435 KIF1AQ12756 1690 aa20.37■□□□□ 0.85
LRBA-212ENST00000514435 PXDNQ92626 1479 aa20.36■□□□□ 0.85
LRBA-212ENST00000514435 EVC2Q86UK5 1308 aa20.36■□□□□ 0.85
LRBA-212ENST00000514435 SOS2Q07890 1332 aaPredicted RBP20.34■□□□□ 0.85
LRBA-212ENST00000514435 ITSN1Q15811 1721 aa20.34■□□□□ 0.85
LRBA-212ENST00000514435 DISP3Q9P2K9 1392 aa20.33■□□□□ 0.84
LRBA-212ENST00000514435 NPHP3Q7Z494 1330 aa20.32■□□□□ 0.84
LRBA-212ENST00000514435 CCDC61Q9Y6R9 512 aa20.32■□□□□ 0.84
LRBA-212ENST00000514435 PPIP5K1Q6PFW1 1433 aa20.31■□□□□ 0.84
LRBA-212ENST00000514435 HSPA5P11021 654 aaKnown RBP20.31■□□□□ 0.84
LRBA-212ENST00000514435 CABP1Q9NZU7 370 aa20.29■□□□□ 0.84
LRBA-212ENST00000514435 KRT28Q7Z3Y7 464 aa20.29■□□□□ 0.84
LRBA-212ENST00000514435 EIF4G2P78344 907 aaKnown RBP eCLIP20.28■□□□□ 0.84
LRBA-212ENST00000514435 ACEP12821 1306 aa20.28■□□□□ 0.84
LRBA-212ENST00000514435 PLEKHG3A1L390 1219 aa20.27■□□□□ 0.84
LRBA-212ENST00000514435 NGDNQ8NEJ9 315 aaKnown RBP20.27■□□□□ 0.84
LRBA-212ENST00000514435 JCADQ9P266 1359 aa20.27■□□□□ 0.84
LRBA-212ENST00000514435 TRPM3Q9HCF6 1732 aaPredicted RBP20.27■□□□□ 0.84
LRBA-212ENST00000514435 POLR3AO14802 1390 aaPredicted RBP20.27■□□□□ 0.84
LRBA-212ENST00000514435 SHPRHQ149N8 1683 aa20.26■□□□□ 0.83
LRBA-212ENST00000514435 PNPLA6Q8IY17 1366 aa20.26■□□□□ 0.83
LRBA-212ENST00000514435 PSME1Q06323 249 aa20.26■□□□□ 0.83
LRBA-212ENST00000514435 LRRC59Q96AG4 307 aaKnown RBP20.26■□□□□ 0.83
LRBA-212ENST00000514435 ATAD2Q6PL18 1390 aa20.25■□□□□ 0.83
LRBA-212ENST00000514435 SPATA31A3Q5VYP0 1347 aa20.23■□□□□ 0.83
LRBA-212ENST00000514435 LRP6O75581 1613 aa20.23■□□□□ 0.83
LRBA-212ENST00000514435 TMF1P82094 1093 aa20.23■□□□□ 0.83
LRBA-212ENST00000514435 CD163L1Q9NR16 1453 aa20.22■□□□□ 0.83
LRBA-212ENST00000514435 SLC12A5Q9H2X9 1139 aa20.22■□□□□ 0.83
LRBA-212ENST00000514435 TNS3Q68CZ2 1445 aa20.22■□□□□ 0.83
LRBA-212ENST00000514435 MED1Q15648 1581 aaPredicted RBP20.21■□□□□ 0.83
LRBA-212ENST00000514435 ALS2Q96Q42 1657 aa20.21■□□□□ 0.83
LRBA-212ENST00000514435 C11orf95C9JLR9 678 aaPredicted RBP20.2■□□□□ 0.82
LRBA-212ENST00000514435 SBNO1A3KN83 1393 aa20.2■□□□□ 0.82
LRBA-212ENST00000514435 AKAP12Q02952 1782 aa20.2■□□□□ 0.82
LRBA-212ENST00000514435 TMC1Q8TDI8 760 aa20.2■□□□□ 0.82
LRBA-212ENST00000514435 COL22A1Q8NFW1 1626 aaPredicted RBP20.19■□□□□ 0.82
LRBA-212ENST00000514435 USP6P35125 1406 aa20.19■□□□□ 0.82
LRBA-212ENST00000514435 CPSF1Q10570 1443 aaKnown RBP20.19■□□□□ 0.82
LRBA-212ENST00000514435 PLEKHG5O94827 1062 aa20.18■□□□□ 0.82
LRBA-212ENST00000514435 NUTM2BA6NNL0 878 aaPredicted RBP20.18■□□□□ 0.82
LRBA-212ENST00000514435 NUTM2EB1AL46 878 aaPredicted RBP20.18■□□□□ 0.82
LRBA-212ENST00000514435 PAK3O75914 559 aaPredicted RBP20.18■□□□□ 0.82
LRBA-212ENST00000514435 NUTM2AQ8IVF1 878 aaPredicted RBP20.18■□□□□ 0.82
LRBA-212ENST00000514435 PUS7Q96PZ0 661 aaKnown RBP20.18■□□□□ 0.82
LRBA-212ENST00000514435 MYOM1P52179 1685 aa20.17■□□□□ 0.82
LRBA-212ENST00000514435 LMOD2Q6P5Q4 547 aa20.17■□□□□ 0.82
LRBA-212ENST00000514435 SSH2Q76I76 1423 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms