RNA–Protein interactions for RNA: ENST00000514316.1

SEMA6A-213, Transcript of semaphorin 6A, humanhuman

TSL 4

Gene SEMA6A, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-213ENST00000514316 SPDYE5A6NIY4 337 aa13.41□□□□□ -0.26
SEMA6A-213ENST00000514316 FMNL1O95466 1100 aaPredicted RBP13.41□□□□□ -0.26
SEMA6A-213ENST00000514316 ITGBL1O95965 494 aaPredicted RBP13.41□□□□□ -0.26
SEMA6A-213ENST00000514316 PROCA1Q8NCQ7 364 aaPredicted RBP13.41□□□□□ -0.26
SEMA6A-213ENST00000514316 PCDHB15Q9Y5E8 787 aa13.41□□□□□ -0.26
SEMA6A-213ENST00000514316 MTMR2Q13614 643 aa13.4□□□□□ -0.26
SEMA6A-213ENST00000514316 BRICD5Q6PL45 260 aa13.4□□□□□ -0.26
SEMA6A-213ENST00000514316 C6orf229H3BNL8 230 aa13.39□□□□□ -0.27
SEMA6A-213ENST00000514316 LILRB3O75022 631 aa13.39□□□□□ -0.27
SEMA6A-213ENST00000514316 CSPP1Q1MSJ5 1256 aa13.39□□□□□ -0.27
SEMA6A-213ENST00000514316 KCNC4Q03721 635 aa13.38□□□□□ -0.27
SEMA6A-213ENST00000514316 THAP11Q96EK4 314 aa13.38□□□□□ -0.27
SEMA6A-213ENST00000514316 NUTM2BA6NNL0 878 aaPredicted RBP13.37□□□□□ -0.27
SEMA6A-213ENST00000514316 NUTM2EB1AL46 878 aaPredicted RBP13.37□□□□□ -0.27
SEMA6A-213ENST00000514316 NUTM2DQ5VT03 806 aaPredicted RBP13.37□□□□□ -0.27
SEMA6A-213ENST00000514316 PPP2R2DQ66LE6 453 aa13.37□□□□□ -0.27
SEMA6A-213ENST00000514316 NUTM2AQ8IVF1 878 aaPredicted RBP13.37□□□□□ -0.27
SEMA6A-213ENST00000514316 HRCP23327 699 aa13.36□□□□□ -0.27
SEMA6A-213ENST00000514316 RNF19BQ6ZMZ0 732 aa13.36□□□□□ -0.27
SEMA6A-213ENST00000514316 RETREG3Q86VR2 466 aa13.36□□□□□ -0.27
SEMA6A-213ENST00000514316 SPSB2Q99619 263 aa13.36□□□□□ -0.27
SEMA6A-213ENST00000514316 QPCTQ16769 361 aa13.35□□□□□ -0.27
SEMA6A-213ENST00000514316 ZNF516Q92618 1163 aa13.35□□□□□ -0.27
SEMA6A-213ENST00000514316 USB1Q9BQ65 265 aaKnown RBP13.35□□□□□ -0.27
SEMA6A-213ENST00000514316 ADH1BP00325 375 aa13.34□□□□□ -0.27
SEMA6A-213ENST00000514316 CABLES1Q8TDN4 633 aa13.34□□□□□ -0.27
SEMA6A-213ENST00000514316 TLL1O43897 1013 aa13.32□□□□□ -0.28
SEMA6A-213ENST00000514316 MSS51Q4VC12 460 aa13.32□□□□□ -0.28
SEMA6A-213ENST00000514316 SYMPKQ92797 1274 aaKnown RBP13.32□□□□□ -0.28
SEMA6A-213ENST00000514316 PLSCR2Q9NRY7 297 aa13.32□□□□□ -0.28
SEMA6A-213ENST00000514316 IFFO2Q5TF58 517 aa13.3□□□□□ -0.28
SEMA6A-213ENST00000514316 RFC5P40937 340 aa13.29□□□□□ -0.28
SEMA6A-213ENST00000514316 RTL5Q5HYW3 569 aaPredicted RBP13.29□□□□□ -0.28
SEMA6A-213ENST00000514316 PRR7Q8TB68 274 aa13.29□□□□□ -0.28
SEMA6A-213ENST00000514316 DESI1Q6ICB0 168 aa13.28□□□□□ -0.28
SEMA6A-213ENST00000514316 TMEM259Q4ZIN3 620 aa13.27□□□□□ -0.29
SEMA6A-213ENST00000514316 FAM160A2Q8N612 972 aaPredicted RBP13.27□□□□□ -0.29
SEMA6A-213ENST00000514316 HELBQ8NG08 1087 aaPredicted RBP13.27□□□□□ -0.29
SEMA6A-213ENST00000514316 SLC6A16Q9GZN6 736 aa13.27□□□□□ -0.29
SEMA6A-213ENST00000514316 NKX2-3Q8TAU0 364 aa13.26□□□□□ -0.29
SEMA6A-213ENST00000514316 CFAP99D6REC4 459 aa13.25□□□□□ -0.29
SEMA6A-213ENST00000514316 FBXO31Q5XUX0 539 aaPredicted RBP13.25□□□□□ -0.29
SEMA6A-213ENST00000514316 PLA2G2EQ9NZK7 142 aa13.25□□□□□ -0.29
SEMA6A-213ENST00000514316 JUNDP17535 347 aa13.23□□□□□ -0.29
SEMA6A-213ENST00000514316 GGCXP38435 758 aa13.23□□□□□ -0.29
SEMA6A-213ENST00000514316 MMP16P51512 607 aa13.23□□□□□ -0.29
SEMA6A-213ENST00000514316 TSC1Q92574 1164 aa13.22□□□□□ -0.29
SEMA6A-213ENST00000514316 DXOO77932 396 aaKnown RBP13.21□□□□□ -0.29
SEMA6A-213ENST00000514316 BANK1Q8NDB2 785 aa13.21□□□□□ -0.29
SEMA6A-213ENST00000514316 AP1G2O75843 785 aa13.2□□□□□ -0.3
SEMA6A-213ENST00000514316 PRDM9Q9NQV7 894 aa13.2□□□□□ -0.3
SEMA6A-213ENST00000514316 S1PR4O95977 384 aa13.19□□□□□ -0.3
SEMA6A-213ENST00000514316 PTPRNQ16849 979 aa13.18□□□□□ -0.3
SEMA6A-213ENST00000514316 GTF3C3Q9Y5Q9 886 aa13.18□□□□□ -0.3
SEMA6A-213ENST00000514316 LYPD8Q6UX82 237 aa13.17□□□□□ -0.3
SEMA6A-213ENST00000514316 USP17L8P0C7I0 530 aa13.16□□□□□ -0.3
SEMA6A-213ENST00000514316 CTDSPL2Q05D32 466 aa13.15□□□□□ -0.3
SEMA6A-213ENST00000514316 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.15□□□□□ -0.3
SEMA6A-213ENST00000514316 PPP1R18Q6NYC8 613 aa13.14□□□□□ -0.31
SEMA6A-213ENST00000514316 SOCS7O14512 581 aa13.13□□□□□ -0.31
SEMA6A-213ENST00000514316 FLIIQ13045 1269 aa13.13□□□□□ -0.31
SEMA6A-213ENST00000514316 ANKLE1Q8NAG6 615 aa13.13□□□□□ -0.31
SEMA6A-213ENST00000514316 NUDT12Q9BQG2 462 aa13.13□□□□□ -0.31
SEMA6A-213ENST00000514316 CCNYL3P0C7X3 344 aa13.12□□□□□ -0.31
SEMA6A-213ENST00000514316 A0A0G2JS52 829 aa13.11□□□□□ -0.31
SEMA6A-213ENST00000514316 RNF223E7ERA6 249 aa13.11□□□□□ -0.31
SEMA6A-213ENST00000514316 APBB1O00213 710 aa13.11□□□□□ -0.31
SEMA6A-213ENST00000514316 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
SEMA6A-213ENST00000514316 FCF1Q9Y324 198 aaKnown RBP13.1□□□□□ -0.31
SEMA6A-213ENST00000514316 EVA1BQ9NVM1 165 aa13.09□□□□□ -0.31
SEMA6A-213ENST00000514316 LRRN4Q8WUT4 740 aa13.08□□□□□ -0.32
SEMA6A-213ENST00000514316 F12P00748 615 aaPredicted RBP13.07□□□□□ -0.32
SEMA6A-213ENST00000514316 MCM6Q14566 821 aa13.07□□□□□ -0.32
SEMA6A-213ENST00000514316 CCDC24Q8N4L8 307 aa13.07□□□□□ -0.32
SEMA6A-213ENST00000514316 PPEF1O14829 653 aaPredicted RBP13.06□□□□□ -0.32
SEMA6A-213ENST00000514316 KCNH2Q12809 1159 aa13.06□□□□□ -0.32
SEMA6A-213ENST00000514316 SNRKQ9NRH2 765 aa13.05□□□□□ -0.32
SEMA6A-213ENST00000514316 CTHP32929 405 aa13.04□□□□□ -0.32
SEMA6A-213ENST00000514316 MTMR14Q8NCE2 650 aa13.04□□□□□ -0.32
SEMA6A-213ENST00000514316 PNMA1Q8ND90 353 aa13.03□□□□□ -0.32
SEMA6A-213ENST00000514316 PRM3Q9NNZ6 103 aa13.03□□□□□ -0.32
SEMA6A-213ENST00000514316 HMX1Q9NP08 348 aaPredicted RBP13.02□□□□□ -0.33
SEMA6A-213ENST00000514316 ZBTB24O43167 697 aaPredicted RBP13.01□□□□□ -0.33
SEMA6A-213ENST00000514316 ARMC2Q8NEN0 867 aa13.01□□□□□ -0.33
SEMA6A-213ENST00000514316 MAP10Q9P2G4 905 aa13.01□□□□□ -0.33
SEMA6A-213ENST00000514316 GJD4Q96KN9 370 aaPredicted RBP13□□□□□ -0.33
SEMA6A-213ENST00000514316 RPIAP49247 311 aa12.99□□□□□ -0.33
SEMA6A-213ENST00000514316 NR6A1Q15406 480 aa12.99□□□□□ -0.33
SEMA6A-213ENST00000514316 TRIM34Q9BYJ4 488 aa12.98□□□□□ -0.33
SEMA6A-213ENST00000514316 UNC93B1Q9H1C4 597 aa12.98□□□□□ -0.33
SEMA6A-213ENST00000514316 NDUFB9Q9Y6M9 179 aa12.98□□□□□ -0.33
SEMA6A-213ENST00000514316 UBTFP17480 764 aaKnown RBP12.97□□□□□ -0.33
SEMA6A-213ENST00000514316 PLA2G2CQ5R387 149 aa12.97□□□□□ -0.33
SEMA6A-213ENST00000514316 PTCRAQ6ISU1 281 aaPredicted RBP12.97□□□□□ -0.33
SEMA6A-213ENST00000514316 ZC3H4Q9UPT8 1303 aaKnown RBP12.96□□□□□ -0.33
SEMA6A-213ENST00000514316 ERICH6Q7L0X2 663 aa12.96□□□□□ -0.33
SEMA6A-213ENST00000514316 GPKOWQ92917 476 aaPredicted RBP eCLIP12.95□□□□□ -0.34
SEMA6A-213ENST00000514316 NBPF14Q5TI25 921 aa12.94□□□□□ -0.34
SEMA6A-213ENST00000514316 EPS8L1Q8TE68 723 aa12.94□□□□□ -0.34
SEMA6A-213ENST00000514316 FKBPLQ9UIM3 349 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms