RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 GCGRP47871 477 aa6.91□□□□□ -1.3
SGCB-203ENST00000514133 COPS2P61201 443 aa6.91□□□□□ -1.3
SGCB-203ENST00000514133 PPP1R18Q6NYC8 613 aa6.91□□□□□ -1.3
SGCB-203ENST00000514133 PROSER2Q86WR7 435 aaPredicted RBP6.91□□□□□ -1.3
SGCB-203ENST00000514133 RDH13Q8NBN7 331 aa6.91□□□□□ -1.3
SGCB-203ENST00000514133 DDX11L8A8MPP1 907 aa6.9□□□□□ -1.3
SGCB-203ENST00000514133 USP46P62068 366 aa6.9□□□□□ -1.3
SGCB-203ENST00000514133 BLOC1S3Q6QNY0 202 aa6.9□□□□□ -1.3
SGCB-203ENST00000514133 ZNF516Q92618 1163 aa6.9□□□□□ -1.3
SGCB-203ENST00000514133 POM121Q96HA1 1249 aa6.9□□□□□ -1.3
SGCB-203ENST00000514133 NPM2Q86SE8 214 aaKnown RBP6.89□□□□□ -1.31
SGCB-203ENST00000514133 NLRP7Q8WX94 980 aa6.89□□□□□ -1.31
SGCB-203ENST00000514133 IRX2Q9BZI1 471 aaPredicted RBP6.89□□□□□ -1.31
SGCB-203ENST00000514133 ADH1BP00325 375 aa6.88□□□□□ -1.31
SGCB-203ENST00000514133 SCUBE3Q8IX30 993 aa6.88□□□□□ -1.31
SGCB-203ENST00000514133 ANKLE1Q8NAG6 615 aa6.88□□□□□ -1.31
SGCB-203ENST00000514133 FAM217BQ9NTX9 383 aaPredicted RBP6.88□□□□□ -1.31
SGCB-203ENST00000514133 CD46P15529 392 aa6.87□□□□□ -1.31
SGCB-203ENST00000514133 Q3C1V9 767 aa6.87□□□□□ -1.31
SGCB-203ENST00000514133 CCDC97Q96F63 343 aaPredicted RBP6.87□□□□□ -1.31
SGCB-203ENST00000514133 MORN1Q5T089 497 aa6.86□□□□□ -1.31
SGCB-203ENST00000514133 MYSM1Q5VVJ2 828 aa6.86□□□□□ -1.31
SGCB-203ENST00000514133 FNBP4Q8N3X1 1017 aaPredicted RBP6.86□□□□□ -1.31
SGCB-203ENST00000514133 SERPINA10Q9UK55 444 aa6.86□□□□□ -1.31
SGCB-203ENST00000514133 FMNL1O95466 1100 aaPredicted RBP6.85□□□□□ -1.31
SGCB-203ENST00000514133 SPSB2Q99619 263 aa6.85□□□□□ -1.31
SGCB-203ENST00000514133 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.85□□□□□ -1.31
SGCB-203ENST00000514133 SLC6A16Q9GZN6 736 aa6.85□□□□□ -1.31
SGCB-203ENST00000514133 SPDYE5A6NIY4 337 aa6.84□□□□□ -1.31
SGCB-203ENST00000514133 KDM4AO75164 1064 aa6.84□□□□□ -1.31
SGCB-203ENST00000514133 CLK2P49760 499 aaKnown RBP6.84□□□□□ -1.31
SGCB-203ENST00000514133 FUT2Q10981 343 aa6.84□□□□□ -1.31
SGCB-203ENST00000514133 DIXDC1Q155Q3 683 aa6.84□□□□□ -1.31
SGCB-203ENST00000514133 NKX2-3Q8TAU0 364 aa6.84□□□□□ -1.31
SGCB-203ENST00000514133 PRKD2Q9BZL6 878 aa6.84□□□□□ -1.31
SGCB-203ENST00000514133 TBC1D2Q9BYX2 928 aa6.83□□□□□ -1.32
SGCB-203ENST00000514133 COG6Q9Y2V7 657 aa6.83□□□□□ -1.32
SGCB-203ENST00000514133 ZNF330Q9Y3S2 320 aaPredicted RBP6.83□□□□□ -1.32
SGCB-203ENST00000514133 CCDC9Q9Y3X0 531 aaKnown RBP6.83□□□□□ -1.32
SGCB-203ENST00000514133 RNF223E7ERA6 249 aa6.82□□□□□ -1.32
SGCB-203ENST00000514133 RFC5P40937 340 aa6.82□□□□□ -1.32
SGCB-203ENST00000514133 MSS51Q4VC12 460 aa6.82□□□□□ -1.32
SGCB-203ENST00000514133 THAP11Q96EK4 314 aa6.82□□□□□ -1.32
SGCB-203ENST00000514133 SNRKQ9NRH2 765 aa6.82□□□□□ -1.32
SGCB-203ENST00000514133 BRICD5Q6PL45 260 aa6.81□□□□□ -1.32
SGCB-203ENST00000514133 BANK1Q8NDB2 785 aa6.81□□□□□ -1.32
SGCB-203ENST00000514133 SLC27A5Q9Y2P5 690 aa6.81□□□□□ -1.32
SGCB-203ENST00000514133 PUS10Q3MIT2 529 aaKnown RBP6.8□□□□□ -1.32
SGCB-203ENST00000514133 NRG2O14511 850 aaPredicted RBP6.79□□□□□ -1.32
SGCB-203ENST00000514133 S1PR4O95977 384 aa6.79□□□□□ -1.32
SGCB-203ENST00000514133 GJA5P36382 358 aa6.79□□□□□ -1.32
SGCB-203ENST00000514133 SLC19A1P41440 591 aa6.79□□□□□ -1.32
SGCB-203ENST00000514133 RPIAP49247 311 aa6.79□□□□□ -1.32
SGCB-203ENST00000514133 TMEM259Q4ZIN3 620 aa6.79□□□□□ -1.32
SGCB-203ENST00000514133 FBXO31Q5XUX0 539 aaPredicted RBP6.79□□□□□ -1.32
SGCB-203ENST00000514133 NUTM1Q86Y26 1132 aa6.79□□□□□ -1.32
SGCB-203ENST00000514133 TLL1O43897 1013 aa6.78□□□□□ -1.32
SGCB-203ENST00000514133 RIC3Q7Z5B4 369 aa6.78□□□□□ -1.32
SGCB-203ENST00000514133 ZNF598Q86UK7 904 aaKnown RBP6.78□□□□□ -1.32
SGCB-203ENST00000514133 AEBP1Q8IUX7 1158 aa6.78□□□□□ -1.32
SGCB-203ENST00000514133 TRAIPQ9BWF2 469 aa6.78□□□□□ -1.32
SGCB-203ENST00000514133 LIMD1Q9UGP4 676 aa6.78□□□□□ -1.32
SGCB-203ENST00000514133 HOXA2O43364 376 aa6.77□□□□□ -1.33
SGCB-203ENST00000514133 CSPP1Q1MSJ5 1256 aa6.77□□□□□ -1.33
SGCB-203ENST00000514133 SPRYD7Q5W111 196 aa6.77□□□□□ -1.33
SGCB-203ENST00000514133 GDPD2Q9HCC8 539 aa6.77□□□□□ -1.33
SGCB-203ENST00000514133 GFRA3O60609 400 aa6.76□□□□□ -1.33
SGCB-203ENST00000514133 CD2BP2O95400 341 aaKnown RBP6.76□□□□□ -1.33
SGCB-203ENST00000514133 MMP16P51512 607 aa6.76□□□□□ -1.33
SGCB-203ENST00000514133 PRR20EP86478 221 aa6.76□□□□□ -1.33
SGCB-203ENST00000514133 PRR20CP86479 221 aa6.76□□□□□ -1.33
SGCB-203ENST00000514133 PRR20DP86480 221 aa6.76□□□□□ -1.33
SGCB-203ENST00000514133 PRR20BP86481 221 aa6.76□□□□□ -1.33
SGCB-203ENST00000514133 PRR20AP86496 221 aa6.76□□□□□ -1.33
SGCB-203ENST00000514133 WWC1Q8IX03 1113 aa6.76□□□□□ -1.33
SGCB-203ENST00000514133 KCTD17Q8N5Z5 321 aa6.76□□□□□ -1.33
SGCB-203ENST00000514133 SPIRE2Q8WWL2 714 aa6.76□□□□□ -1.33
SGCB-203ENST00000514133 USB1Q9BQ65 265 aaKnown RBP6.76□□□□□ -1.33
SGCB-203ENST00000514133 ABL2P42684 1182 aa6.75□□□□□ -1.33
SGCB-203ENST00000514133 PPP2R2DQ66LE6 453 aa6.75□□□□□ -1.33
SGCB-203ENST00000514133 FAM160A2Q8N612 972 aaPredicted RBP6.74□□□□□ -1.33
SGCB-203ENST00000514133 RETREG2Q8NC44 543 aa6.74□□□□□ -1.33
SGCB-203ENST00000514133 MTMR14Q8NCE2 650 aa6.74□□□□□ -1.33
SGCB-203ENST00000514133 CALR3Q96L12 384 aaKnown RBP6.74□□□□□ -1.33
SGCB-203ENST00000514133 PRM3Q9NNZ6 103 aa6.74□□□□□ -1.33
SGCB-203ENST00000514133 ZBTB24O43167 697 aaPredicted RBP6.73□□□□□ -1.33
SGCB-203ENST00000514133 RETREG3Q86VR2 466 aa6.73□□□□□ -1.33
SGCB-203ENST00000514133 PDZRN3Q9UPQ7 1066 aa6.73□□□□□ -1.33
SGCB-203ENST00000514133 ACIN1Q9UKV3 1341 aaKnown RBP6.73□□□□□ -1.33
SGCB-203ENST00000514133 SPTLC1O15269 473 aa6.72□□□□□ -1.33
SGCB-203ENST00000514133 AP1G2O75843 785 aa6.72□□□□□ -1.33
SGCB-203ENST00000514133 DXOO77932 396 aaKnown RBP6.72□□□□□ -1.33
SGCB-203ENST00000514133 Q6ZNB5 142 aa6.72□□□□□ -1.33
SGCB-203ENST00000514133 MOXD2PA6NHM9 499 aa6.71□□□□□ -1.34
SGCB-203ENST00000514133 NUTM2BA6NNL0 878 aaPredicted RBP6.71□□□□□ -1.34
SGCB-203ENST00000514133 NUTM2EB1AL46 878 aaPredicted RBP6.71□□□□□ -1.34
SGCB-203ENST00000514133 FDX1P10109 184 aa6.71□□□□□ -1.34
SGCB-203ENST00000514133 NDUFV2P19404 249 aa6.71□□□□□ -1.34
SGCB-203ENST00000514133 QPCTQ16769 361 aa6.71□□□□□ -1.34
SGCB-203ENST00000514133 ZNF697Q5TEC3 545 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms