RNA–Protein interactions for RNA: ENST00000514055.5

CAST-240, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-240ENST00000514055 RALGAPBQ86X10 1494 aa13.18□□□□□ -0.3
CAST-240ENST00000514055 ZNF326Q5BKZ1 582 aaKnown RBP13.18□□□□□ -0.3
CAST-240ENST00000514055 ROBO2Q9HCK4 1378 aa13.18□□□□□ -0.3
CAST-240ENST00000514055 HRCP23327 699 aa13.17□□□□□ -0.3
CAST-240ENST00000514055 ITGAEP38570 1179 aa13.16□□□□□ -0.3
CAST-240ENST00000514055 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
CAST-240ENST00000514055 UNC5CLQ8IV45 518 aa13.15□□□□□ -0.3
CAST-240ENST00000514055 SEPT12Q8IYM1 358 aa13.15□□□□□ -0.3
CAST-240ENST00000514055 BRWD3Q6RI45 1802 aa13.15□□□□□ -0.3
CAST-240ENST00000514055 PXDNQ92626 1479 aa13.14□□□□□ -0.31
CAST-240ENST00000514055 NUP155O75694 1391 aa13.13□□□□□ -0.31
CAST-240ENST00000514055 ROCK1Q13464 1354 aa13.13□□□□□ -0.31
CAST-240ENST00000514055 ESCO1Q5FWF5 840 aa13.13□□□□□ -0.31
CAST-240ENST00000514055 IQGAP3Q86VI3 1631 aa13.13□□□□□ -0.31
CAST-240ENST00000514055 SLIT2O94813 1529 aa13.13□□□□□ -0.31
CAST-240ENST00000514055 FOXO3O43524 673 aa13.12□□□□□ -0.31
CAST-240ENST00000514055 MARF1Q9Y4F3 1742 aaKnown RBP13.12□□□□□ -0.31
CAST-240ENST00000514055 NEXMIFQ5QGS0 1516 aa13.11□□□□□ -0.31
CAST-240ENST00000514055 NPHP3Q7Z494 1330 aa13.11□□□□□ -0.31
CAST-240ENST00000514055 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.1□□□□□ -0.31
CAST-240ENST00000514055 NUTM2FA1L443 756 aa13.1□□□□□ -0.31
CAST-240ENST00000514055 PLEKHG5O94827 1062 aa13.09□□□□□ -0.31
CAST-240ENST00000514055 KRT27Q7Z3Y8 459 aa13.09□□□□□ -0.31
CAST-240ENST00000514055 EN1Q05925 392 aaPredicted RBP13.08□□□□□ -0.32
CAST-240ENST00000514055 R3HDM1Q15032 1099 aaKnown RBP13.08□□□□□ -0.32
CAST-240ENST00000514055 BAG6P46379 1132 aa13.07□□□□□ -0.32
CAST-240ENST00000514055 SPHKAPQ2M3C7 1700 aa13.06□□□□□ -0.32
CAST-240ENST00000514055 YY1P25490 414 aa13.06□□□□□ -0.32
CAST-240ENST00000514055 VPS72Q15906 364 aa13.06□□□□□ -0.32
CAST-240ENST00000514055 CABLES1Q8TDN4 633 aa13.06□□□□□ -0.32
CAST-240ENST00000514055 CCDC9Q9Y3X0 531 aaKnown RBP13.06□□□□□ -0.32
CAST-240ENST00000514055 CLTCL1P53675 1640 aa13.06□□□□□ -0.32
CAST-240ENST00000514055 ONECUT3O60422 494 aaPredicted RBP13.05□□□□□ -0.32
CAST-240ENST00000514055 FAM182BQ5T319 152 aa13.05□□□□□ -0.32
CAST-240ENST00000514055 SPATA31A3Q5VYP0 1347 aa13.05□□□□□ -0.32
CAST-240ENST00000514055 HFM1A2PYH4 1435 aa13.05□□□□□ -0.32
CAST-240ENST00000514055 USP32Q8NFA0 1604 aa13.03□□□□□ -0.32
CAST-240ENST00000514055 A0A0G2JS52 829 aa13.03□□□□□ -0.32
CAST-240ENST00000514055 MYT1Q01538 1121 aa13.03□□□□□ -0.32
CAST-240ENST00000514055 NAIPQ13075 1403 aa13.03□□□□□ -0.32
CAST-240ENST00000514055 PRAG1Q86YV5 1406 aa13.03□□□□□ -0.32
CAST-240ENST00000514055 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
CAST-240ENST00000514055 FAM98CQ17RN3 349 aaKnown RBP13.02□□□□□ -0.33
CAST-240ENST00000514055 WAPLQ7Z5K2 1190 aa13.02□□□□□ -0.33
CAST-240ENST00000514055 EZH2Q15910 746 aaKnown RBP13.01□□□□□ -0.33
CAST-240ENST00000514055 KRT28Q7Z3Y7 464 aa13.01□□□□□ -0.33
CAST-240ENST00000514055 LRPPRCP42704 1394 aaKnown RBP13.01□□□□□ -0.33
CAST-240ENST00000514055 PLEKHH1Q9ULM0 1364 aa13□□□□□ -0.33
CAST-240ENST00000514055 HAP1P54257 671 aaPredicted RBP13□□□□□ -0.33
CAST-240ENST00000514055 PLCH1Q4KWH8 1693 aa12.99□□□□□ -0.33
CAST-240ENST00000514055 FAM83GA6ND36 823 aa12.99□□□□□ -0.33
CAST-240ENST00000514055 VGFO15240 615 aaPredicted RBP12.99□□□□□ -0.33
CAST-240ENST00000514055 STK26Q9P289 416 aa12.99□□□□□ -0.33
CAST-240ENST00000514055 LMOD2Q6P5Q4 547 aa12.96□□□□□ -0.33
CAST-240ENST00000514055 CCDC144AA2RUR9 1427 aa12.96□□□□□ -0.34
CAST-240ENST00000514055 TNS3Q68CZ2 1445 aa12.96□□□□□ -0.34
CAST-240ENST00000514055 KIF1BO60333 1816 aa12.95□□□□□ -0.34
CAST-240ENST00000514055 CAMKK2Q96RR4 588 aa12.95□□□□□ -0.34
CAST-240ENST00000514055 NWD2Q9ULI1 1742 aa12.95□□□□□ -0.34
CAST-240ENST00000514055 RGPD1P0DJD0 1748 aa12.94□□□□□ -0.34
CAST-240ENST00000514055 BTG4Q9NY30 223 aa12.94□□□□□ -0.34
CAST-240ENST00000514055 DISP2A7MBM2 1401 aa12.94□□□□□ -0.34
CAST-240ENST00000514055 TNS1Q9HBL0 1735 aaKnown RBP12.93□□□□□ -0.34
CAST-240ENST00000514055 ADGRF5Q8IZF2 1346 aa12.93□□□□□ -0.34
CAST-240ENST00000514055 TMEM132EQ6IEE7 984 aa12.93□□□□□ -0.34
CAST-240ENST00000514055 NRAPQ86VF7 1730 aa12.93□□□□□ -0.34
CAST-240ENST00000514055 ABCA3Q99758 1704 aa12.93□□□□□ -0.34
CAST-240ENST00000514055 TRIM37O94972 964 aa12.92□□□□□ -0.34
CAST-240ENST00000514055 FMN2Q9NZ56 1722 aa12.92□□□□□ -0.34
CAST-240ENST00000514055 PHF8Q9UPP1 1060 aa12.92□□□□□ -0.34
CAST-240ENST00000514055 RPGRIP1LQ68CZ1 1315 aa12.91□□□□□ -0.34
CAST-240ENST00000514055 TECPR2O15040 1411 aa12.91□□□□□ -0.34
CAST-240ENST00000514055 KIF1AQ12756 1690 aa12.91□□□□□ -0.34
CAST-240ENST00000514055 UTRNP46939 3433 aa12.91□□□□□ -0.34
CAST-240ENST00000514055 PPLO60437 1756 aa12.9□□□□□ -0.34
CAST-240ENST00000514055 PSME1Q06323 249 aa12.9□□□□□ -0.34
CAST-240ENST00000514055 SBNO1A3KN83 1393 aa12.9□□□□□ -0.34
CAST-240ENST00000514055 SPATA31A5Q5VU36 1347 aa12.89□□□□□ -0.35
CAST-240ENST00000514055 SPATA31A7Q8IWB4 1347 aa12.89□□□□□ -0.35
CAST-240ENST00000514055 APBA3O96018 575 aa12.89□□□□□ -0.35
CAST-240ENST00000514055 RAB3GAP2Q9H2M9 1393 aa12.89□□□□□ -0.35
CAST-240ENST00000514055 RGPD8O14715 1765 aaPredicted RBP12.89□□□□□ -0.35
CAST-240ENST00000514055 PMFBP1Q8TBY8 1022 aa12.88□□□□□ -0.35
CAST-240ENST00000514055 ABCC11Q96J66 1382 aa12.88□□□□□ -0.35
CAST-240ENST00000514055 THSD7AQ9UPZ6 1657 aa12.87□□□□□ -0.35
CAST-240ENST00000514055 CAMTA1Q9Y6Y1 1673 aa12.87□□□□□ -0.35
CAST-240ENST00000514055 NRXN1Q9ULB1 1477 aa12.87□□□□□ -0.35
CAST-240ENST00000514055 ARHGEF10O15013 1369 aa12.87□□□□□ -0.35
CAST-240ENST00000514055 TRIM26Q12899 539 aaPredicted RBP12.87□□□□□ -0.35
CAST-240ENST00000514055 PPP1R1BQ9UD71 204 aaPredicted RBP12.87□□□□□ -0.35
CAST-240ENST00000514055 ACIN1Q9UKV3 1341 aaKnown RBP12.87□□□□□ -0.35
CAST-240ENST00000514055 SAFB2Q14151 953 aaKnown RBP eCLIP12.85□□□□□ -0.35
CAST-240ENST00000514055 ZNF784Q8NCA9 323 aaPredicted RBP12.85□□□□□ -0.35
CAST-240ENST00000514055 SENP3-EIF4A1A0A087X0R7 540 aa12.84□□□□□ -0.35
CAST-240ENST00000514055 KCNQ2O43526 872 aa12.84□□□□□ -0.35
CAST-240ENST00000514055 RGL3Q3MIN7 710 aa12.84□□□□□ -0.35
CAST-240ENST00000514055 FAM196AQ6ZSG2 479 aa12.84□□□□□ -0.35
CAST-240ENST00000514055 SLC4A1APQ9BWU0 796 aaKnown RBP12.84□□□□□ -0.35
CAST-240ENST00000514055 SPON1Q9HCB6 807 aa12.84□□□□□ -0.35
CAST-240ENST00000514055 YTHDC2Q9H6S0 1430 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms