RNA–Protein interactions for RNA: ENST00000513997.1

DDX60-205, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-205ENST00000513997 SRPK2P78362 688 aaKnown RBP12.99□□□□□ -0.33
DDX60-205ENST00000513997 CHMP4AQ9BY43 222 aa12.99□□□□□ -0.33
DDX60-205ENST00000513997 BHMG1C9JSJ3 638 aaPredicted RBP12.98□□□□□ -0.33
DDX60-205ENST00000513997 RBM47A0AV96 593 aaKnown RBP12.97□□□□□ -0.33
DDX60-205ENST00000513997 ADGRD1Q6QNK2 874 aa12.97□□□□□ -0.33
DDX60-205ENST00000513997 TMEM134Q9H6X4 195 aa12.97□□□□□ -0.33
DDX60-205ENST00000513997 FAM217BQ9NTX9 383 aaPredicted RBP12.97□□□□□ -0.33
DDX60-205ENST00000513997 SEPT9Q9UHD8 586 aaPredicted RBP12.97□□□□□ -0.33
DDX60-205ENST00000513997 CARNS1A5YM72 827 aa12.96□□□□□ -0.33
DDX60-205ENST00000513997 FBXO31Q5XUX0 539 aaPredicted RBP12.96□□□□□ -0.33
DDX60-205ENST00000513997 RFX1P22670 979 aa12.95□□□□□ -0.34
DDX60-205ENST00000513997 CFAP70Q5T0N1 1121 aa12.95□□□□□ -0.34
DDX60-205ENST00000513997 PPP2R2DQ66LE6 453 aa12.95□□□□□ -0.34
DDX60-205ENST00000513997 SOCS7O14512 581 aa12.94□□□□□ -0.34
DDX60-205ENST00000513997 PRM3Q9NNZ6 103 aa12.94□□□□□ -0.34
DDX60-205ENST00000513997 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
DDX60-205ENST00000513997 ANKRD13DQ6ZTN6 518 aa12.93□□□□□ -0.34
DDX60-205ENST00000513997 NBPF3Q9H094 633 aa12.93□□□□□ -0.34
DDX60-205ENST00000513997 VRTNQ9H8Y1 702 aa12.93□□□□□ -0.34
DDX60-205ENST00000513997 HRO43593 1189 aa12.92□□□□□ -0.34
DDX60-205ENST00000513997 LAPTM4BQ86VI4 370 aa12.92□□□□□ -0.34
DDX60-205ENST00000513997 KRTAP3-3Q9BYR6 98 aa12.92□□□□□ -0.34
DDX60-205ENST00000513997 KRTAP3-2Q9BYR7 98 aa12.92□□□□□ -0.34
DDX60-205ENST00000513997 CCDC125Q86Z20 511 aa12.91□□□□□ -0.34
DDX60-205ENST00000513997 TBC1D2BQ9UPU7 963 aa12.91□□□□□ -0.34
DDX60-205ENST00000513997 POTEGQ6S5H5 508 aa12.9□□□□□ -0.34
DDX60-205ENST00000513997 HDGFL1Q5TGJ6 251 aa12.89□□□□□ -0.35
DDX60-205ENST00000513997 POTEMA6NI47 508 aa12.88□□□□□ -0.35
DDX60-205ENST00000513997 MRPL50Q8N5N7 158 aaKnown RBP12.88□□□□□ -0.35
DDX60-205ENST00000513997 GNEQ9Y223 722 aaKnown RBP12.88□□□□□ -0.35
DDX60-205ENST00000513997 SWT1Q5T5J6 900 aaKnown RBP12.87□□□□□ -0.35
DDX60-205ENST00000513997 ADAMTS19Q8TE59 1207 aa12.87□□□□□ -0.35
DDX60-205ENST00000513997 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
DDX60-205ENST00000513997 SULF1Q8IWU6 871 aa12.86□□□□□ -0.35
DDX60-205ENST00000513997 DDX11L8A8MPP1 907 aa12.85□□□□□ -0.35
DDX60-205ENST00000513997 CD46P15529 392 aa12.85□□□□□ -0.35
DDX60-205ENST00000513997 DIXDC1Q155Q3 683 aa12.85□□□□□ -0.35
DDX60-205ENST00000513997 ZFRQ96KR1 1074 aaKnown RBP12.85□□□□□ -0.35
DDX60-205ENST00000513997 KIAA1522Q9P206 1035 aaPredicted RBP12.85□□□□□ -0.35
DDX60-205ENST00000513997 TMEM88BA6NKF7 163 aa12.84□□□□□ -0.35
DDX60-205ENST00000513997 HDGFP51858 240 aaKnown RBP12.84□□□□□ -0.35
DDX60-205ENST00000513997 SAMD7Q7Z3H4 446 aa12.84□□□□□ -0.35
DDX60-205ENST00000513997 PPP1R12CQ9BZL4 782 aa12.84□□□□□ -0.35
DDX60-205ENST00000513997 LIMD1Q9UGP4 676 aa12.84□□□□□ -0.35
DDX60-205ENST00000513997 CDAN1Q8IWY9 1227 aa12.83□□□□□ -0.36
DDX60-205ENST00000513997 MRRFQ96E11 262 aaKnown RBP12.82□□□□□ -0.36
DDX60-205ENST00000513997 TXNDC2Q86VQ3 553 aa12.81□□□□□ -0.36
DDX60-205ENST00000513997 STAC3Q96MF2 364 aa12.8□□□□□ -0.36
DDX60-205ENST00000513997 ATG7O95352 703 aa12.79□□□□□ -0.36
DDX60-205ENST00000513997 SLC10A3P09131 477 aa12.79□□□□□ -0.36
DDX60-205ENST00000513997 CANXP27824 592 aaKnown RBP12.78□□□□□ -0.36
DDX60-205ENST00000513997 TUSC1Q2TAM9 212 aa12.78□□□□□ -0.36
DDX60-205ENST00000513997 SLF2Q8IX21 1173 aa12.78□□□□□ -0.36
DDX60-205ENST00000513997 RDH13Q8NBN7 331 aa12.78□□□□□ -0.36
DDX60-205ENST00000513997 ERCC3P19447 782 aa12.77□□□□□ -0.37
DDX60-205ENST00000513997 RIC3Q7Z5B4 369 aa12.77□□□□□ -0.37
DDX60-205ENST00000513997 B4GALNT3Q6L9W6 998 aa12.76□□□□□ -0.37
DDX60-205ENST00000513997 PALM3A6NDB9 673 aaPredicted RBP12.75□□□□□ -0.37
DDX60-205ENST00000513997 GOLGA8CPA6NN73 597 aa12.75□□□□□ -0.37
DDX60-205ENST00000513997 LMOD1P29536 600 aaPredicted RBP12.75□□□□□ -0.37
DDX60-205ENST00000513997 GCGRP47871 477 aa12.75□□□□□ -0.37
DDX60-205ENST00000513997 SLC4A3P48751 1232 aa12.75□□□□□ -0.37
DDX60-205ENST00000513997 WASHC4Q2M389 1173 aa12.75□□□□□ -0.37
DDX60-205ENST00000513997 SPIRE2Q8WWL2 714 aa12.75□□□□□ -0.37
DDX60-205ENST00000513997 LRCH3Q96II8 777 aa12.75□□□□□ -0.37
DDX60-205ENST00000513997 PPM1GO15355 546 aaPredicted RBP12.74□□□□□ -0.37
DDX60-205ENST00000513997 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.74□□□□□ -0.37
DDX60-205ENST00000513997 DNAJC14Q6Y2X3 702 aaPredicted RBP12.73□□□□□ -0.37
DDX60-205ENST00000513997 ANKK1Q8NFD2 765 aa12.73□□□□□ -0.37
DDX60-205ENST00000513997 NDUFB9Q9Y6M9 179 aa12.72□□□□□ -0.37
DDX60-205ENST00000513997 SOWAHBA6NEL2 793 aa12.71□□□□□ -0.37
DDX60-205ENST00000513997 RNF40O75150 1001 aa12.71□□□□□ -0.37
DDX60-205ENST00000513997 AP1G2O75843 785 aa12.71□□□□□ -0.37
DDX60-205ENST00000513997 NUTM1Q86Y26 1132 aa12.71□□□□□ -0.37
DDX60-205ENST00000513997 WNT2BQ93097 391 aa12.71□□□□□ -0.37
DDX60-205ENST00000513997 DRC1Q96MC2 740 aa12.71□□□□□ -0.37
DDX60-205ENST00000513997 SPTLC1O15269 473 aa12.7□□□□□ -0.38
DDX60-205ENST00000513997 KDM4AO75164 1064 aa12.7□□□□□ -0.38
DDX60-205ENST00000513997 TCF3P15923 654 aa12.7□□□□□ -0.38
DDX60-205ENST00000513997 ZNF16P17020 682 aaPredicted RBP12.7□□□□□ -0.38
DDX60-205ENST00000513997 SIRT1Q96EB6 747 aa12.7□□□□□ -0.38
DDX60-205ENST00000513997 USP17L8P0C7I0 530 aa12.69□□□□□ -0.38
DDX60-205ENST00000513997 BCAMP50895 628 aa12.69□□□□□ -0.38
DDX60-205ENST00000513997 CCER1Q8TC90 406 aaPredicted RBP12.69□□□□□ -0.38
DDX60-205ENST00000513997 C8orf37Q96NL8 207 aa12.69□□□□□ -0.38
DDX60-205ENST00000513997 SREK1Q8WXA9 508 aaKnown RBP12.68□□□□□ -0.38
DDX60-205ENST00000513997 GJD4Q96KN9 370 aaPredicted RBP12.68□□□□□ -0.38
DDX60-205ENST00000513997 ALG2Q9H553 416 aa12.68□□□□□ -0.38
DDX60-205ENST00000513997 CFHP08603 1231 aa12.67□□□□□ -0.38
DDX60-205ENST00000513997 CDCA8Q53HL2 280 aa12.67□□□□□ -0.38
DDX60-205ENST00000513997 TFIP11Q9UBB9 837 aaKnown RBP12.67□□□□□ -0.38
DDX60-205ENST00000513997 MOXD2PA6NHM9 499 aa12.65□□□□□ -0.38
DDX60-205ENST00000513997 PPP4CP60510 307 aa12.65□□□□□ -0.38
DDX60-205ENST00000513997 USP46P62068 366 aa12.65□□□□□ -0.38
DDX60-205ENST00000513997 RSBN1LQ6PCB5 846 aaPredicted RBP12.65□□□□□ -0.38
DDX60-205ENST00000513997 SPATA32Q96LK8 384 aa12.65□□□□□ -0.38
DDX60-205ENST00000513997 UCN2Q96RP3 112 aa12.65□□□□□ -0.38
DDX60-205ENST00000513997 TSR3Q9UJK0 312 aaKnown RBP12.65□□□□□ -0.38
DDX60-205ENST00000513997 HPS5Q9UPZ3 1129 aa12.65□□□□□ -0.38
DDX60-205ENST00000513997 LILRB3O75022 631 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms