RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 YTHDC2Q9H6S0 1430 aaKnown RBP11.86□□□□□ -0.51
NEDD4-210ENST00000513957 ROBO1Q9Y6N7 1651 aa11.85□□□□□ -0.51
NEDD4-210ENST00000513957 CADPS2Q86UW7 1296 aa11.85□□□□□ -0.51
NEDD4-210ENST00000513957 DCAF11Q8TEB1 546 aa11.85□□□□□ -0.51
NEDD4-210ENST00000513957 C19orf44Q9H6X5 657 aa11.85□□□□□ -0.51
NEDD4-210ENST00000513957 CLSPNQ9HAW4 1339 aa11.85□□□□□ -0.51
NEDD4-210ENST00000513957 SIRT1Q96EB6 747 aa11.84□□□□□ -0.51
NEDD4-210ENST00000513957 ARHGEF28Q8N1W1 1705 aaKnown RBP11.83□□□□□ -0.52
NEDD4-210ENST00000513957 TRPM1Q7Z4N2 1603 aa11.83□□□□□ -0.52
NEDD4-210ENST00000513957 ROBO2Q9HCK4 1378 aa11.83□□□□□ -0.52
NEDD4-210ENST00000513957 MYCNP04198 464 aaPredicted RBP11.82□□□□□ -0.52
NEDD4-210ENST00000513957 C14orf37Q86TY3 774 aa11.82□□□□□ -0.52
NEDD4-210ENST00000513957 TAOK2Q9UL54 1235 aa11.82□□□□□ -0.52
NEDD4-210ENST00000513957 ADGRB2O60241 1585 aa11.82□□□□□ -0.52
NEDD4-210ENST00000513957 ATF3P18847 181 aa11.81□□□□□ -0.52
NEDD4-210ENST00000513957 HAP1P54257 671 aaPredicted RBP11.81□□□□□ -0.52
NEDD4-210ENST00000513957 NHSL1Q5SYE7 1610 aa11.8□□□□□ -0.52
NEDD4-210ENST00000513957 AHDC1Q5TGY3 1603 aaPredicted RBP11.8□□□□□ -0.52
NEDD4-210ENST00000513957 PRKCSHP14314 528 aaPredicted RBP11.8□□□□□ -0.52
NEDD4-210ENST00000513957 CFAP70Q5T0N1 1121 aa11.8□□□□□ -0.52
NEDD4-210ENST00000513957 FMN2Q9NZ56 1722 aa11.8□□□□□ -0.52
NEDD4-210ENST00000513957 KDM2AQ9Y2K7 1162 aa11.79□□□□□ -0.52
NEDD4-210ENST00000513957 PHLPP1O60346 1717 aa11.79□□□□□ -0.52
NEDD4-210ENST00000513957 TONSLQ96HA7 1378 aa11.79□□□□□ -0.52
NEDD4-210ENST00000513957 MST1RQ04912 1400 aa11.78□□□□□ -0.52
NEDD4-210ENST00000513957 PIP4K2BP78356 416 aa11.78□□□□□ -0.52
NEDD4-210ENST00000513957 PCGF6Q9BYE7 350 aa11.78□□□□□ -0.52
NEDD4-210ENST00000513957 SLAIN2Q9P270 581 aa11.78□□□□□ -0.52
NEDD4-210ENST00000513957 KIF1AQ12756 1690 aa11.78□□□□□ -0.52
NEDD4-210ENST00000513957 TMEM132EQ6IEE7 984 aa11.77□□□□□ -0.53
NEDD4-210ENST00000513957 L3MBTL2Q969R5 705 aa11.77□□□□□ -0.53
NEDD4-210ENST00000513957 RBM33Q96EV2 1170 aaKnown RBP11.77□□□□□ -0.53
NEDD4-210ENST00000513957 COL16A1Q07092 1604 aaPredicted RBP11.76□□□□□ -0.53
NEDD4-210ENST00000513957 SIN3AQ96ST3 1273 aa11.76□□□□□ -0.53
NEDD4-210ENST00000513957 ITSN1Q15811 1721 aa11.76□□□□□ -0.53
NEDD4-210ENST00000513957 EIF3AQ14152 1382 aaKnown RBP11.76□□□□□ -0.53
NEDD4-210ENST00000513957 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
NEDD4-210ENST00000513957 TIMELESSQ9UNS1 1208 aa11.75□□□□□ -0.53
NEDD4-210ENST00000513957 SHPRHQ149N8 1683 aa11.75□□□□□ -0.53
NEDD4-210ENST00000513957 NEUROD1Q13562 356 aa11.74□□□□□ -0.53
NEDD4-210ENST00000513957 STK26Q9P289 416 aa11.74□□□□□ -0.53
NEDD4-210ENST00000513957 C1orf167Q5SNV9 1468 aa11.74□□□□□ -0.53
NEDD4-210ENST00000513957 RALGAPBQ86X10 1494 aa11.74□□□□□ -0.53
NEDD4-210ENST00000513957 QRICH2Q9H0J4 1663 aa11.74□□□□□ -0.53
NEDD4-210ENST00000513957 GPRASP1Q5JY77 1395 aa11.73□□□□□ -0.53
NEDD4-210ENST00000513957 ANKARQ7Z5J8 1434 aa11.73□□□□□ -0.53
NEDD4-210ENST00000513957 VSIG10Q8N0Z9 540 aa11.73□□□□□ -0.53
NEDD4-210ENST00000513957 RGPD8O14715 1765 aaPredicted RBP11.72□□□□□ -0.53
NEDD4-210ENST00000513957 PLEKHH1Q9ULM0 1364 aa11.72□□□□□ -0.53
NEDD4-210ENST00000513957 HSPA1LP34931 641 aa11.72□□□□□ -0.53
NEDD4-210ENST00000513957 PRAM1Q96QH2 718 aa11.72□□□□□ -0.53
NEDD4-210ENST00000513957 TULP4Q9NRJ4 1543 aa11.71□□□□□ -0.53
NEDD4-210ENST00000513957 ROCK2O75116 1388 aaKnown RBP11.71□□□□□ -0.53
NEDD4-210ENST00000513957 BRINP3Q76B58 766 aa11.71□□□□□ -0.53
NEDD4-210ENST00000513957 WAPLQ7Z5K2 1190 aa11.71□□□□□ -0.53
NEDD4-210ENST00000513957 POGKQ9P215 609 aa11.71□□□□□ -0.53
NEDD4-210ENST00000513957 TRAK1Q9UPV9 953 aa11.7□□□□□ -0.54
NEDD4-210ENST00000513957 USP32Q8NFA0 1604 aa11.7□□□□□ -0.54
NEDD4-210ENST00000513957 TOPAZ1Q8N9V7 1692 aa11.69□□□□□ -0.54
NEDD4-210ENST00000513957 JCADQ9P266 1359 aa11.68□□□□□ -0.54
NEDD4-210ENST00000513957 MED1Q15648 1581 aaPredicted RBP11.68□□□□□ -0.54
NEDD4-210ENST00000513957 SBNO2Q9Y2G9 1366 aa11.67□□□□□ -0.54
NEDD4-210ENST00000513957 NPHP3Q7Z494 1330 aa11.67□□□□□ -0.54
NEDD4-210ENST00000513957 COL22A1Q8NFW1 1626 aaPredicted RBP11.67□□□□□ -0.54
NEDD4-210ENST00000513957 CENPJQ9HC77 1338 aaPredicted RBP11.66□□□□□ -0.54
NEDD4-210ENST00000513957 NBPF1Q3BBV0 1214 aa11.66□□□□□ -0.54
NEDD4-210ENST00000513957 ATP7BP35670 1465 aa11.65□□□□□ -0.54
NEDD4-210ENST00000513957 PXDNQ92626 1479 aa11.65□□□□□ -0.54
NEDD4-210ENST00000513957 WASLO00401 505 aaPredicted RBP11.65□□□□□ -0.54
NEDD4-210ENST00000513957 CCER1Q8TC90 406 aaPredicted RBP11.65□□□□□ -0.54
NEDD4-210ENST00000513957 SOS2Q07890 1332 aaPredicted RBP11.64□□□□□ -0.55
NEDD4-210ENST00000513957 SPATA31A6Q5VVP1 1343 aa11.64□□□□□ -0.55
NEDD4-210ENST00000513957 NBPF8Q3BBV2 869 aa11.64□□□□□ -0.55
NEDD4-210ENST00000513957 ESCO1Q5FWF5 840 aa11.64□□□□□ -0.55
NEDD4-210ENST00000513957 LRRC59Q96AG4 307 aaKnown RBP11.64□□□□□ -0.55
NEDD4-210ENST00000513957 MINK1Q8N4C8 1332 aaPredicted RBP11.63□□□□□ -0.55
NEDD4-210ENST00000513957 HOXD11P31277 338 aaPredicted RBP11.63□□□□□ -0.55
NEDD4-210ENST00000513957 SAFB2Q14151 953 aaKnown RBP eCLIP11.63□□□□□ -0.55
NEDD4-210ENST00000513957 ORAI2Q96SN7 254 aa11.62□□□□□ -0.55
NEDD4-210ENST00000513957 CARD11Q9BXL7 1154 aa11.62□□□□□ -0.55
NEDD4-210ENST00000513957 FBXO3Q9UK99 471 aa11.62□□□□□ -0.55
NEDD4-210ENST00000513957 TRPM3Q9HCF6 1732 aaPredicted RBP11.62□□□□□ -0.55
NEDD4-210ENST00000513957 MARF1Q9Y4F3 1742 aaKnown RBP11.62□□□□□ -0.55
NEDD4-210ENST00000513957 ALS2Q96Q42 1657 aa11.6□□□□□ -0.55
NEDD4-210ENST00000513957 TPRNQ4KMQ1 711 aa11.6□□□□□ -0.55
NEDD4-210ENST00000513957 HIRIP3Q9BW71 556 aaPredicted RBP11.6□□□□□ -0.55
NEDD4-210ENST00000513957 PHF8Q9UPP1 1060 aa11.6□□□□□ -0.55
NEDD4-210ENST00000513957 EVC2Q86UK5 1308 aa11.6□□□□□ -0.55
NEDD4-210ENST00000513957 SBNO1A3KN83 1393 aa11.59□□□□□ -0.55
NEDD4-210ENST00000513957 PNPLA6Q8IY17 1366 aa11.59□□□□□ -0.55
NEDD4-210ENST00000513957 PSME1Q06323 249 aa11.59□□□□□ -0.55
NEDD4-210ENST00000513957 ABCA3Q99758 1704 aa11.59□□□□□ -0.55
NEDD4-210ENST00000513957 TNS3Q68CZ2 1445 aa11.59□□□□□ -0.55
NEDD4-210ENST00000513957 AKAP12Q02952 1782 aa11.59□□□□□ -0.55
NEDD4-210ENST00000513957 POLR3AO14802 1390 aaPredicted RBP11.58□□□□□ -0.56
NEDD4-210ENST00000513957 BRD4O60885 1362 aaPredicted RBP11.58□□□□□ -0.56
NEDD4-210ENST00000513957 FOXO3O43524 673 aa11.58□□□□□ -0.56
NEDD4-210ENST00000513957 CDK19Q9BWU1 502 aa11.58□□□□□ -0.56
NEDD4-210ENST00000513957 CCDC61Q9Y6R9 512 aa11.58□□□□□ -0.56
NEDD4-210ENST00000513957 PRR36Q9H6K5 1346 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms