RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 XRN1Q8IZH2 1706 aaKnown RBP10.67□□□□□ -0.7
HTT-212ENST00000513639 LRPPRCP42704 1394 aaKnown RBP10.67□□□□□ -0.7
HTT-212ENST00000513639 AHDC1Q5TGY3 1603 aaPredicted RBP10.66□□□□□ -0.7
HTT-212ENST00000513639 RXRBP28702 533 aa10.66□□□□□ -0.7
HTT-212ENST00000513639 CFAP70Q5T0N1 1121 aa10.66□□□□□ -0.7
HTT-212ENST00000513639 DDX17Q92841 729 aaKnown RBP10.66□□□□□ -0.7
HTT-212ENST00000513639 SOS2Q07890 1332 aaPredicted RBP10.65□□□□□ -0.7
HTT-212ENST00000513639 NPHP3Q7Z494 1330 aa10.65□□□□□ -0.7
HTT-212ENST00000513639 DCAF11Q8TEB1 546 aa10.65□□□□□ -0.7
HTT-212ENST00000513639 POGKQ9P215 609 aa10.65□□□□□ -0.7
HTT-212ENST00000513639 KDM2AQ9Y2K7 1162 aa10.65□□□□□ -0.7
HTT-212ENST00000513639 ASXL1Q8IXJ9 1541 aa10.64□□□□□ -0.71
HTT-212ENST00000513639 FOXO3O43524 673 aa10.64□□□□□ -0.71
HTT-212ENST00000513639 NGLY1Q96IV0 654 aa10.64□□□□□ -0.71
HTT-212ENST00000513639 PIK3C2GO75747 1445 aa10.64□□□□□ -0.71
HTT-212ENST00000513639 COL16A1Q07092 1604 aaPredicted RBP10.63□□□□□ -0.71
HTT-212ENST00000513639 QTRT2Q9H974 415 aaKnown RBP10.63□□□□□ -0.71
HTT-212ENST00000513639 TECPR2O15040 1411 aa10.63□□□□□ -0.71
HTT-212ENST00000513639 YTHDC2Q9H6S0 1430 aaKnown RBP10.63□□□□□ -0.71
HTT-212ENST00000513639 PPLO60437 1756 aa10.62□□□□□ -0.71
HTT-212ENST00000513639 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
HTT-212ENST00000513639 PSME1Q06323 249 aa10.62□□□□□ -0.71
HTT-212ENST00000513639 C8orf37Q96NL8 207 aa10.62□□□□□ -0.71
HTT-212ENST00000513639 PRAM1Q96QH2 718 aa10.62□□□□□ -0.71
HTT-212ENST00000513639 AFF2P51816 1311 aa10.61□□□□□ -0.71
HTT-212ENST00000513639 ADAMTS2O95450 1211 aa10.61□□□□□ -0.71
HTT-212ENST00000513639 PNPLA6Q8IY17 1366 aa10.61□□□□□ -0.71
HTT-212ENST00000513639 RBM6P78332 1123 aaKnown RBP10.6□□□□□ -0.71
HTT-212ENST00000513639 KRT28Q7Z3Y7 464 aa10.6□□□□□ -0.71
HTT-212ENST00000513639 SAFB2Q14151 953 aaKnown RBP eCLIP10.59□□□□□ -0.71
HTT-212ENST00000513639 PHF8Q9UPP1 1060 aa10.59□□□□□ -0.71
HTT-212ENST00000513639 TRAK1Q9UPV9 953 aa10.59□□□□□ -0.71
HTT-212ENST00000513639 PLEKHH1Q9ULM0 1364 aa10.59□□□□□ -0.71
HTT-212ENST00000513639 MYOM2P54296 1465 aa10.59□□□□□ -0.71
HTT-212ENST00000513639 NRXN1Q9ULB1 1477 aa10.59□□□□□ -0.71
HTT-212ENST00000513639 LRP6O75581 1613 aa10.58□□□□□ -0.72
HTT-212ENST00000513639 FNBP4Q8N3X1 1017 aaPredicted RBP10.58□□□□□ -0.72
HTT-212ENST00000513639 USP21Q9UK80 565 aa10.58□□□□□ -0.72
HTT-212ENST00000513639 SHPRHQ149N8 1683 aa10.57□□□□□ -0.72
HTT-212ENST00000513639 XPCQ01831 940 aaPredicted RBP10.57□□□□□ -0.72
HTT-212ENST00000513639 TRPC5Q9UL62 973 aaPredicted RBP10.57□□□□□ -0.72
HTT-212ENST00000513639 SETD1AO15047 1707 aaKnown RBP10.57□□□□□ -0.72
HTT-212ENST00000513639 NALCNQ8IZF0 1738 aa10.56□□□□□ -0.72
HTT-212ENST00000513639 SPATA31A3Q5VYP0 1347 aa10.56□□□□□ -0.72
HTT-212ENST00000513639 NHSL1Q5SYE7 1610 aa10.55□□□□□ -0.72
HTT-212ENST00000513639 WASLO00401 505 aaPredicted RBP10.55□□□□□ -0.72
HTT-212ENST00000513639 HAP1P54257 671 aaPredicted RBP10.55□□□□□ -0.72
HTT-212ENST00000513639 MAPK8IP2Q13387 824 aaPredicted RBP10.55□□□□□ -0.72
HTT-212ENST00000513639 CDC42BPGQ6DT37 1551 aa10.55□□□□□ -0.72
HTT-212ENST00000513639 EIF3AQ14152 1382 aaKnown RBP10.54□□□□□ -0.72
HTT-212ENST00000513639 LMOD2Q6P5Q4 547 aa10.54□□□□□ -0.72
HTT-212ENST00000513639 HIRIP3Q9BW71 556 aaPredicted RBP10.54□□□□□ -0.72
HTT-212ENST00000513639 MINK1Q8N4C8 1332 aaPredicted RBP10.54□□□□□ -0.72
HTT-212ENST00000513639 PMFBP1Q8TBY8 1022 aa10.53□□□□□ -0.72
HTT-212ENST00000513639 UPF1Q92900 1129 aaKnown RBP eCLIP10.53□□□□□ -0.72
HTT-212ENST00000513639 LAMC1P11047 1609 aa10.53□□□□□ -0.72
HTT-212ENST00000513639 CDK12Q9NYV4 1490 aaPredicted RBP10.53□□□□□ -0.72
HTT-212ENST00000513639 IFT172Q9UG01 1749 aa10.53□□□□□ -0.72
HTT-212ENST00000513639 GPRASP1Q5JY77 1395 aa10.52□□□□□ -0.72
HTT-212ENST00000513639 NGDNQ8NEJ9 315 aaKnown RBP10.52□□□□□ -0.73
HTT-212ENST00000513639 PXDNQ92626 1479 aa10.52□□□□□ -0.73
HTT-212ENST00000513639 DLC1Q96QB1 1528 aa10.52□□□□□ -0.73
HTT-212ENST00000513639 SBNO1A3KN83 1393 aa10.52□□□□□ -0.73
HTT-212ENST00000513639 ANKARQ7Z5J8 1434 aa10.51□□□□□ -0.73
HTT-212ENST00000513639 UNC5CLQ8IV45 518 aa10.51□□□□□ -0.73
HTT-212ENST00000513639 ARHGEF10O15013 1369 aa10.51□□□□□ -0.73
HTT-212ENST00000513639 NUDT16Q96DE0 195 aaKnown RBP10.5□□□□□ -0.73
HTT-212ENST00000513639 GJD4Q96KN9 370 aaPredicted RBP10.5□□□□□ -0.73
HTT-212ENST00000513639 CDK19Q9BWU1 502 aa10.5□□□□□ -0.73
HTT-212ENST00000513639 PAK3O75914 559 aaPredicted RBP10.49□□□□□ -0.73
HTT-212ENST00000513639 CCDC61Q9Y6R9 512 aa10.49□□□□□ -0.73
HTT-212ENST00000513639 KNDC1Q76NI1 1749 aa10.49□□□□□ -0.73
HTT-212ENST00000513639 NEUROD1Q13562 356 aa10.48□□□□□ -0.73
HTT-212ENST00000513639 NBPF1Q3BBV0 1214 aa10.48□□□□□ -0.73
HTT-212ENST00000513639 CCDC125Q86Z20 511 aa10.48□□□□□ -0.73
HTT-212ENST00000513639 CABLES1Q8TDN4 633 aa10.48□□□□□ -0.73
HTT-212ENST00000513639 L3MBTL2Q969R5 705 aa10.48□□□□□ -0.73
HTT-212ENST00000513639 ADGRB1O14514 1584 aa10.48□□□□□ -0.73
HTT-212ENST00000513639 TNS3Q68CZ2 1445 aa10.47□□□□□ -0.73
HTT-212ENST00000513639 BCL9LQ86UU0 1499 aa10.47□□□□□ -0.73
HTT-212ENST00000513639 PLEKHG3A1L390 1219 aa10.46□□□□□ -0.73
HTT-212ENST00000513639 FAM83GA6ND36 823 aa10.46□□□□□ -0.73
HTT-212ENST00000513639 PLEKHG5O94827 1062 aa10.46□□□□□ -0.73
HTT-212ENST00000513639 VPS72Q15906 364 aa10.46□□□□□ -0.73
HTT-212ENST00000513639 NBPF8Q3BBV2 869 aa10.46□□□□□ -0.73
HTT-212ENST00000513639 SIN3AQ96ST3 1273 aa10.46□□□□□ -0.73
HTT-212ENST00000513639 PRR36Q9H6K5 1346 aa10.46□□□□□ -0.73
HTT-212ENST00000513639 ATRNO75882 1429 aa10.46□□□□□ -0.74
HTT-212ENST00000513639 FMN2Q9NZ56 1722 aa10.45□□□□□ -0.74
HTT-212ENST00000513639 KIF1AQ12756 1690 aa10.45□□□□□ -0.74
HTT-212ENST00000513639 COL22A1Q8NFW1 1626 aaPredicted RBP10.45□□□□□ -0.74
HTT-212ENST00000513639 ATAD2Q6PL18 1390 aa10.45□□□□□ -0.74
HTT-212ENST00000513639 CENPJQ9HC77 1338 aaPredicted RBP10.45□□□□□ -0.74
HTT-212ENST00000513639 SRPK2P78362 688 aaKnown RBP10.45□□□□□ -0.74
HTT-212ENST00000513639 POTEDQ86YR6 584 aa10.45□□□□□ -0.74
HTT-212ENST00000513639 CCDC9Q9Y3X0 531 aaKnown RBP10.45□□□□□ -0.74
HTT-212ENST00000513639 ONECUT3O60422 494 aaPredicted RBP10.44□□□□□ -0.74
HTT-212ENST00000513639 ACEP12821 1306 aa10.43□□□□□ -0.74
HTT-212ENST00000513639 RGS12O14924 1447 aa10.42□□□□□ -0.74
HTT-212ENST00000513639 ABTB2Q8N961 1025 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms